mRNA_F-serratus_M_contig890.20269.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5L9I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9I0_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.010e-55 Identity = 91/122 (74.59%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 1 KRKNLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
KRKN N+ EK EVIRHLL GSK+GVL GA+KAAAE+FGC W++ KRLWR+YD QH+AGV+ PQLAN R G SGR+ +PIEELR RLRDIPLNDRTTQRR AAAL IP TLH NLKALGLR
Sbjct: 12 KRKNFNNSEKEEVIRHLLTGSKNGVLPYGAFKAAAEKFGCHWETNKRLWRRYDTQHKAGVSSPQLANRRNGNSGRKGVPIEELRERLRDIPLNDRTTQRRLAAALEIPLTTLHKNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5KHK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK2_9PHAE) HSP 1 Score: 165 bits (417), Expect = 4.350e-50 Identity = 83/122 (68.03%), Postives = 100/122 (81.97%), Query Frame = 1
Query: 1 KRKNLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
KRKN N+ E EVIR+LL GSK+GVL+ GA+K A E+FG W++IKRLW +YD QH+AGVA PQ+ N RKG SGR+ IP+EEL+ R RDIPLN+RTTQRR AAAL IP++TLH NLKALGLR
Sbjct: 12 KRKNFNEEETEEVIRYLLPGSKNGVLRYGAFKEAGEKFGWYWETIKRLWMRYDTQHKAGVASPQIDNRRKGNSGRQGIPLEELKERPRDIPLNERTTQRRLAAALVIPKSTLHRNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5K5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M0_9PHAE) HSP 1 Score: 150 bits (379), Expect = 3.340e-44 Identity = 74/122 (60.66%), Postives = 95/122 (77.87%), Query Frame = 1
Query: 1 KRKNLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
KRKN N LE+ EVIRHLLA S+DGVL+ GAY+ AAE++GC W++IK +W K++++ AG + N RKG SGR+ I +E+LR RLRDIPLN+RTTQRR AAALGIP+ TL NL+ LGL+
Sbjct: 12 KRKNFNALEREEVIRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLEKLGLK 133
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5KRW0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW0_9PHAE) HSP 1 Score: 148 bits (373), Expect = 1.510e-42 Identity = 73/122 (59.84%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 1 KRKNLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
KRKN N E+ EV+R+LLA S+DGV + G+Y AAE++GC W++IKR+W+K++++ ++G + N RKG SG + I IE LRARL +IPLN+RTTQRR AAALGIP++TLHNNLKALGLR
Sbjct: 12 KRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5KLV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV4_9PHAE) HSP 1 Score: 148 bits (373), Expect = 3.730e-41 Identity = 73/122 (59.84%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 1 KRKNLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
KRKN N E+ EV+R+LLA S+DGV + G+Y AAE++GC W++IKR+W+K++++ ++G + N RKG SG + I IE LRARL +IPLN+RTTQRR AAALGIP++TLHNNLKALGLR
Sbjct: 12 KRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5JEL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL2_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.100e-27 Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 151 KYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
+YD QH+AGVA PQ+ N RKG SGR+ IP+EEL+ RLRDIPLNDRTTQRR AAALGIP++TLH NLK LGLR
Sbjct: 2 RYDTQHKAGVASPQIENRRKGNSGRKGIPLEELKERLRDIPLNDRTTQRRLAAALGIPKSTLHRNLKVLGLR 73
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5KBK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK8_9PHAE) HSP 1 Score: 107 bits (266), Expect = 4.230e-27 Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 133 IKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
KRLW +Y+ Q +AGVA P++ N RKG SGR+ IPI+ELR RLRDIPLNDRTTQRR AAALGI TL +NLKALGLR
Sbjct: 17 FKRLWVRYEAQRKAGVARPKIGNLRKGNSGRKGIPIQELRERLRDIPLNDRTTQRRLAAALGIATTTLFDNLKALGLR 94
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5JAZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.560e-23 Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 151 KYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
+Y QH+AGVA P++ N R G SGR+ IP+EELR RLRDIPLN RTTQRR AAALGIP++TLH N KALGLR
Sbjct: 2 RYYTQHKAGVASPKIENRRMGNSGRKGIPLEELRERLRDIPLN-RTTQRRLAAALGIPKSTLHRNPKALGLR 72
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A6H5LD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD91_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 1.820e-17 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 37 VIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHNNLKALGLR 366
++ LL GS +G L G K + +++ + W+ Y+++ +AG P L N RKG SG++ + I L+ L+DI L +RTT R AAALGIP++TL +NL LGLR
Sbjct: 1 MVAELLKGSNNGALSHGDVKRVVAIYKQTPKTVSKYWKLYNQKKEAGEEDPDLHNKRKGNSGQKGLDIATLKEALQDIHLKNRTTIRSIAAALGIPKSTLFDNLNNLGLR 110
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Match: A0A225WYZ1_9STRA (Mariner Transposase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYZ1_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.330e-10 Identity = 36/111 (32.43%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 10 NLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRKYDEQHQAGVAHPQLANGRKGKSGREVIPIEELRARLRDIPLNDRTTQRRFAAALGIPRATLHN 342
+L+D + ++ HLL S G L RGA +AA +F ++ R+W +Y++ AG +++ KG SGR+ EL A++R +P+ RT R+ A +LG+ + N
Sbjct: 5 SLDDSTRRAILLHLLIASTGGELPRGAKTSAATKFNVHRHTVDRIWSRYNDSVAAGDLSGDVSSRYKGNSGRKGYDRVELAAKIRSVPVEQRTNYRQTAKSLGLSVGLIFN 115 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig890.20269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig890.20269.1 >prot_F-serratus_M_contig890.20269.1 ID=prot_F-serratus_M_contig890.20269.1|Name=mRNA_F-serratus_M_contig890.20269.1|organism=Fucus serratus male|type=polypeptide|length=122bp KRKNLNDLEKAEVIRHLLAGSKDGVLKRGAYKAAAEEFGCEWQSIKRLWRback to top mRNA from alignment at F-serratus_M_contig890:160434..160799- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig890.20269.1 ID=mRNA_F-serratus_M_contig890.20269.1|Name=mRNA_F-serratus_M_contig890.20269.1|organism=Fucus serratus male|type=mRNA|length=366bp|location=Sequence derived from alignment at F-serratus_M_contig890:160434..160799- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig890:160434..160799- >mRNA_F-serratus_M_contig890.20269.1 ID=mRNA_F-serratus_M_contig890.20269.1|Name=mRNA_F-serratus_M_contig890.20269.1|organism=Fucus serratus male|type=CDS|length=732bp|location=Sequence derived from alignment at F-serratus_M_contig890:160434..160799- (Fucus serratus male)back to top |