mRNA_F-serratus_M_contig889.20261.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 301 bits (771), Expect = 1.950e-94 Identity = 142/247 (57.49%), Postives = 177/247 (71.66%), Query Frame = 1
Query: 1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE---------------------ATVDEQGNTNRPTQPLNGRDVFLV 678
WTYRRT+T+G +PYGPSDW +GYPDCG AQSPI+L A + V+ + ++L+F+P+ C S +L F A+ERVWE+LF CS + + F GE YNL+QIHIHSPSEH IGGS +AEIHWVHVKEGT D+LLVVGVL+D ++YG+NVE++ LWDVLD G + F T+IYD++P N VFSHY GSLTTPPCTEGV WIVM++ + VDE GNTNRP Q LN R +F V
Sbjct: 42 WTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 244 bits (623), Expect = 2.040e-72 Identity = 125/250 (50.00%), Postives = 161/250 (64.40%), Query Frame = 1
Query: 1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKE---GTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATV---------------------DEQGNTNRPTQPLNGRDVFLV 678
WTYRR + +G PY PSDW GYPDCG +QSPINL A+ + VE+T+F+L+ F CAS +L F AN VWE+ F+EC+ ++LSF+G Y+L+Q+HIHSPSEH + GSL AEIH VH ++ GT ELLV+GV D E+G NV L+PLWDVL +GA Y+LIP + +SHY GSLTTPPC+E V W+VM+ TV DE+ NTNRP Q +NGR V++V
Sbjct: 49 WTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRGV---INPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 241 bits (616), Expect = 2.180e-71 Identity = 119/247 (48.18%), Postives = 152/247 (61.54%), Query Frame = 1
Query: 1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE---------------------ATVDEQGNTNRPTQPLNGRDVFLV 678
WTYR T G EPYGP DW GYPDC + Q+PIN+ A + + FFP C S++L F ++ VW+V F+ C+ L + GETYNL+Q HIHSPSEH +GG+ AAEIH VH+K+ TTD LLVVG++++VS+YG NVEL+P+W+V+D A F Y L+P F+ Y+GSLTTPPCTEGV WI+M+E + V E G TNRP Q LNGRDV V
Sbjct: 47 WTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYV 293
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 161 bits (408), Expect = 2.940e-43 Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 319 IGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE---------------------ATVDEQGNTNRPTQPLNGRDVFLV 678
IGGS AEIHWVHVK GT D+LLV+GVL+D ++YG+NVE++ LWDVLD G + F T++YD++P N VFSHY GSLTTPPCTEGV WIVM++ + VDE GNTNRP Q LN RD+F V
Sbjct: 2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK) HSP 1 Score: 122 bits (307), Expect = 5.400e-28 Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 1
Query: 28 GGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIA-NERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDV----LDTGAASASASFDTQIY-DLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE 606
G E P +W DC +QSPIN+ ++ S S Q L C DL ++ N W+V +EC + ++N Y LVQ H HSPSE+ IGG AE+H VH + LLV+GV++DV +YG N + W+ + TG + S S Y +++P + + H+NGSLTTPPC+EGVTWI+M++
Sbjct: 47 GEEACSPENWYAYAEDCAGESQSPINVVQASPSTTLS-QLVLNKNNEDC---DLLYLVDNYHTWKVDMSECDGSYTTTWNDVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADSN--LLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 239
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 122 bits (305), Expect = 1.730e-27 Identity = 85/255 (33.33%), Postives = 112/255 (43.92%), Query Frame = 1
Query: 55 WLQGYPDCGLSAQSPINLE---ASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNE-CSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYD-VSEYGTNVELQPLWD-----------------------VLDTGAASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEAT---------------------VDEQGNTNRPTQPLNGRDVF 672
W YPDC QSPIN+ +T + F C DL + A+ + W V F+ C +++ NG +NL+Q H+HS SEH IGG AEIH+VH L VVGV+ S+ N+E W+ V T ++S SA Y ++P + + +Y GSLTTPPC+E VTWIVM E VD GN RP QP NGR V+
Sbjct: 2 WGALYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDMGACMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK) HSP 1 Score: 122 bits (305), Expect = 1.900e-27 Identity = 75/193 (38.86%), Postives = 107/193 (55.44%), Query Frame = 1
Query: 46 PSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIA-NERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDV----LDTGAASASASFDTQIY-DLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE 606
P +W + DC QSPIN+ + S S Q L C DL ++ N W+V +EC + ++NG Y LVQ H HSPSE+ IGG AE+H VH + LLV+GV++DV +YG N + W+ + TG + S S Y +++P + + H+NGSLTTPPC+EGVTWI+M++
Sbjct: 79 PENWGEVNRDCEGENQSPINVVMAQKSKSLS-QLQLNKNNEDC---DLLYLVDNYHTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADSN--LLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 265
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A450XNX8_9GAMM (Carbonic anhydrase n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A450XNX8_9GAMM) HSP 1 Score: 119 bits (298), Expect = 1.200e-26 Identity = 78/226 (34.51%), Postives = 117/226 (51.77%), Query Frame = 1
Query: 40 YGPSDWLQGYPDCGLS-AQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTGAASASASFDT-QIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEAT--VDEQ--------GNTNRPTQPLNGRDVFLVK 681
+GP W + CG QSPI+++ T + S D+Q+ P + + N + F + L +G+ Y L+Q+H H+PSEH IGG L + E+H VH + EL V+G++ + E N ++ +W+ + A + S +T + L+P +K F +Y GSLTTPPC+EGV W VM +EQ G +NRP QPLNGR +F K
Sbjct: 38 HGPEHWGKVSAVCGSGKTQSPIDIKGQTKTGAPS--LDMQYHP----VPSINVLNNGHTIKGSFG--GEKNRLLVDGKPYKLLQLHFHTPSEHQIGGKLASMELHLVH--QNADKELAVIGIM--IEEGKENKAIKGIWEKMPKKVAKETESHETFNVASLLPKDKTFFYYMGSLTTPPCSEGVRWFVMKTPIHFSEEQIRKFHRIIGVSNRPLQPLNGRTIFQGK 251
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A662WYL3_9STRA (Carbonic anhydrase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYL3_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.770e-25 Identity = 84/262 (32.06%), Postives = 125/262 (47.71%), Query Frame = 1
Query: 1 WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEAS--THSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKEGTTDELLVVGVLYDVSEYGT-NVELQPLWDVLDTGAASASA-----------------SFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEA---TVDE---------------QGNTNRPTQPLNGRDVF 672
W YR T + E GPSDW YP CG S QSP+N+ +HS L+F C + + + WE+ +E + S++F+G +Y+L Q H+HS SEH + E+H+VH + G + LLV +L + N + LW+ ++TG A+ ++ + L+ + +F+ YNGSLTTPPC+E V W V+N T DE + NRPTQPLNGR++
Sbjct: 2083 WGYRETTS---EELGPSDWKNSYPSCGGSHQSPVNIPVRELSHSDWGMPYAPLKF-SGDCERFTMRTLEDLYKWEINGDENCNVKSINFDGRSYSLAQFHLHSTSEHTLDDYHYDGELHFVHKEVGGSGNLLVTSLLLNAQPIEMENGFIGNLWNAMNTGDAAVDLEQIGYGCSREHALFCRINYADMLNGLVSKSHLFN-YNGSLTTPPCSEIVDWWVLNNPISITYDELKLMKSLYAKRPSANNSSDNRPTQPLNGREIM 2339
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Match: A0A7S3XQ34_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ34_HETAK) HSP 1 Score: 115 bits (287), Expect = 7.170e-25 Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 1
Query: 46 PSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDLQFFPHTCASSDLTFIANERVWEVLFNECSQLASLSFNGETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVK-EGTTDELLVVGVLYDVSEYGTNVELQPLWDVLDTG------AASASASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNE 606
P +W DC ++QSPIN+ ++ S+ S LQ + + + I N W+V C ++ G Y L+Q H HSPSE+ IGG AE+H VH EG ELLV+GV++DV +YG N W+ + S ++ D +++P + H+NGSLTTPPC+EGVTWI+M++
Sbjct: 95 PENWDSVNDDCAGTSQSPINVVQASPSSDLS---GLQLTKAKSSCNAVYLIDNYHTWKVDMTSCDDAYYATWKGTDYYLIQFHFHSPSENTIGGGYFDAEMHLVHASAEG---ELLVIGVMFDVVDYGGNHFFSQFWNNTWSDDPDWYRVVSLESNLDPYT-EILPATPSYYHWNGSLTTPPCSEGVTWILMSQ 281 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig889.20261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig889.20261.1 >prot_F-serratus_M_contig889.20261.1 ID=prot_F-serratus_M_contig889.20261.1|Name=mRNA_F-serratus_M_contig889.20261.1|organism=Fucus serratus male|type=polypeptide|length=229bp WTYRRTATDGGEPYGPSDWLQGYPDCGLSAQSPINLEASTHSAVESTQFDback to top mRNA from alignment at F-serratus_M_contig889:105212..109156+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig889.20261.1 ID=mRNA_F-serratus_M_contig889.20261.1|Name=mRNA_F-serratus_M_contig889.20261.1|organism=Fucus serratus male|type=mRNA|length=3945bp|location=Sequence derived from alignment at F-serratus_M_contig889:105212..109156+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig889:105212..109156+ >mRNA_F-serratus_M_contig889.20261.1 ID=mRNA_F-serratus_M_contig889.20261.1|Name=mRNA_F-serratus_M_contig889.20261.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig889:105212..109156+ (Fucus serratus male)back to top |