mRNA_F-serratus_M_contig888.20258.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 4.130e-182 Identity = 268/434 (61.75%), Postives = 315/434 (72.58%), Query Frame = 1
Query: 106 EDRGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFES 1404
E GC T+TDLY R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L + G+VFYCRG+ IGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+P Y GRSF+NCVSE + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ S+IHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT +GG A GIFLHRSSD V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG N+VH+N+F+ S GLYTYQGSD P D SDGRPSDN F N I N G+KI E DDTVIT N FTGTS EF DAQ+T W NT +C KN S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 1.080e-173 Identity = 255/440 (57.95%), Postives = 310/440 (70.45%), Query Frame = 1
Query: 52 KASTRWASGTGLNGRIYLEDRGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKD 1368
+ S R+A+ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDD+ + PS +T WLL ++L++ G VFYC+GT GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YENGRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ S+IHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ A GIFLHRSSD V+DN + +MQDAG+A++ESFDA I+ N KYGIR+SLG GNN V+ N F S+YGLYTY+GSD PD S DGRPS N N + + G+KI E DD NTF FEF ++ +T+WS N D
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 481 bits (1238), Expect = 1.750e-164 Identity = 246/443 (55.53%), Postives = 305/443 (68.85%), Query Frame = 1
Query: 106 EDRGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFES 1404
E GC T+TDLY R E+DG + KGP+Y+LD + + +P+SVT KWLL ++L+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETC+G +ND GECRMDII SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNS+IHHMYYG YSYG QGGVWTNN+MHDNHQY +A +GG AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN V++GIR+SLG G N+V+DN F+ CS +GLYTY GSD PD S+ GRP+ N+F N ++N+ G+K +D+ V+T N FTGT EF DAQ T WS N+ S +C N S
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITS 443
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 5.010e-157 Identity = 229/416 (55.05%), Postives = 285/416 (68.51%), Query Frame = 1
Query: 115 GCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY-ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNT 1359
GC T++DLY + + KGP+++LD ND + + ++ TGKWLLT+DLFV G+ YCRG G+GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + P + Y++GRSFI CVSE ++TC N+ GECRMDII SEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K S+IHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ A GIFLHRS D EVY N + +M DAG+A++E+ DIHDN ++GIR+ LG NN VHDNVF G++TY GSD P GRP DN FY NTI TETG+KI E+D+ IT N F+GT+ EF +A D VWS N+
Sbjct: 10 GCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNS 421
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 4.960e-142 Identity = 207/348 (59.48%), Postives = 247/348 (70.98%), Query Frame = 1
Query: 127 MTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSK 1143
MTDLY R E DG + KGP+Y+LDD+ + PS +T WLL ++L++ G VFYC+GT GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ S+IHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ AVGIFLHRSSD V+DN + +MQDAG+A++E+FDA I+ NT KYGIR+SLG GNN V+ N F S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 405 bits (1040), Expect = 6.040e-136 Identity = 228/405 (56.30%), Postives = 268/405 (66.17%), Query Frame = 1
Query: 190 ILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNTFKDADSDLCYKNFES 1404
+LDD+ + + SP+SVT KWLL S+L+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNSNIHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +AVGIFLHRSSD+ EVY G DAPD S+ GRP+ N+F N I+NT G+KI +D+ VI+ N FTGT EF DAQ T WS N+ S +C N S
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTS 346
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 2.800e-135 Identity = 223/431 (51.74%), Postives = 282/431 (65.43%), Query Frame = 1
Query: 100 YLEDRGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDET--CEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYGNTISNT--ETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSNT 1359
Y E GCGT+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL +L V+ GS GT GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N + +GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+ +GG AVGIFLHRSSD EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD PD +S+GRPSDN F GNTI G+ I E D V N FTG S +EF+D+ DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVV--GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 5.880e-135 Identity = 224/441 (50.79%), Postives = 286/441 (64.85%), Query Frame = 1
Query: 91 GRIYLEDRGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESD--ETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSL---FEFKDAQDTVWSSNTFKDADSDLCYK 1392
G+ Y+ GC T+TD+Y ++ G GP+++LD ND+++ S TG WLL D+ V +GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +S+I+ MYYG YS+G GG+WT NKMHDN QYGFDPHDDSD L IA +GG AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D P+AS D G DN+F+ NT+ E G+KI +A+ V T N F S + F+D +D VW++N D D+C K
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVV--GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLK 827
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 382 bits (980), Expect = 7.820e-121 Identity = 214/444 (48.20%), Postives = 261/444 (58.78%), Query Frame = 1
Query: 115 GCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYS---PSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDE--TCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGM------------------------AIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDAS-SDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 1356
GC T+TD+Y ++ S GP+Y+LD +++I+ +S TG WLLTS L +L G Y GT GGD D LRIQST DF E+RG GGSL F T VTSWDT +YE GRSFINCV++++ + +C G+ + GECRMDII S MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S I+ MYYGMYSYG QGGVWT+N M DN YGFDPHDDSD LTIA G+ GI + ++ E+Y A+MESF A+I+DNT N KYGIR+SLG +N++HDN FD S YGLYTY+GSD PD S +DGR DNSF NTISNT+ MKI E DD T N F FEF+D+ DTVW++N
Sbjct: 414 GCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 363 bits (932), Expect = 1.300e-117 Identity = 211/456 (46.27%), Postives = 267/456 (58.55%), Query Frame = 1
Query: 31 PDTCTGTKASTRWASGTGLNGRIYLEDR------GCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPSSVTGKWLLTSDLFVLKGSVFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY--ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSNIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVHDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTETGMKIAEADDTVITGNTF-TGTS---LFEFKDAQDTVWSSNT 1359
PD + + S R+A G R+YLE GC T+ +++SR K P+Y +D D+ D+ + TG WLLT +L+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP +D +GRS+I+ VSE + DETCEG +N GE RMDI SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +S+IHH+ +G+Y+YG Q G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R+S+G +N +N+ SKY YTY GSD PD S GR +N F N+ S E +KI EAD T N F G + + F DA ++V NT
Sbjct: 41 PDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVS---ETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig888.20258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig888.20258.1 >prot_F-serratus_M_contig888.20258.1 ID=prot_F-serratus_M_contig888.20258.1|Name=mRNA_F-serratus_M_contig888.20258.1|organism=Fucus serratus male|type=polypeptide|length=461bp MTIPDTCTGTKASTRWASGTGLNGRIYLEDRGCGTMTDLYKSRVESDGWTback to top mRNA from alignment at F-serratus_M_contig888:319410..326975- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig888.20258.1 ID=mRNA_F-serratus_M_contig888.20258.1|Name=mRNA_F-serratus_M_contig888.20258.1|organism=Fucus serratus male|type=mRNA|length=7566bp|location=Sequence derived from alignment at F-serratus_M_contig888:319410..326975- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig888:319410..326975- >mRNA_F-serratus_M_contig888.20258.1 ID=mRNA_F-serratus_M_contig888.20258.1|Name=mRNA_F-serratus_M_contig888.20258.1|organism=Fucus serratus male|type=CDS|length=2766bp|location=Sequence derived from alignment at F-serratus_M_contig888:319410..326975- (Fucus serratus male)back to top |