prot_F-serratus_M_contig888.20254.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig888.20254.1
Unique Nameprot_F-serratus_M_contig888.20254.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length151
Homology
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 7.930e-76
Identity = 108/149 (72.48%), Postives = 127/149 (85.23%), Query Frame = 0
Query:    3 SPTSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDT 151
            SPTSVT KWLL S+L++  G+IFYC G+  GGDCDELRIQSTG  D+ EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE  + ETCDG+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+T
Sbjct:   11 SPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFET 159          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 1.900e-73
Identity = 106/149 (71.14%), Postives = 127/149 (85.23%), Query Frame = 0
Query:    3 SPTSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDT 151
            +P  ++ KWLL ++LHI  G++FYCRG+SIGGDCDELRIQSTG TDF+EVR HGGS+YFE+T+VTSWDTPNK+P   Y  GRSF+NCVSE  + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDT
Sbjct:  120 NPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDT 268          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.600e-71
Identity = 107/158 (67.72%), Postives = 126/158 (79.75%), Query Frame = 0
Query:    3 SPTSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDT 151
            +PTSVT KWLL ++L++  G+IFYC G+  GGDCDELRIQSTG  D+ EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE  + ETCDG  KND GECRMDII+SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+T
Sbjct:   56 APTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFET 213          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 3.810e-71
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0
Query:    4 PTSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFD 150
            P+ +T  WLLA++L+I  G +FYC+G S GGDC++LRIQSTGS DF+EVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE  + + C+G  KN+ GECRMDII+SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD
Sbjct:   33 PSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFD 187          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 3.970e-69
Identity = 101/147 (68.71%), Postives = 125/147 (85.03%), Query Frame = 0
Query:    4 PTSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD 150
            P+ +T  WLLA++L+I  G +FYC+G S GGDC++LRIQSTGS DF+EVRGHGGSLYFE+T+VTSWDTPNK P + YE+GRSF+NCVSE  + + C+G  KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+
Sbjct:  484 PSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFE 630          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.870e-59
Identity = 91/147 (61.90%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    5 TSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEY-ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD 150
            T+ TGKWLL +DL +  G+  YCRG  +GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + P + Y+DGRSFI CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD
Sbjct:   47 TTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFD 190          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 3.290e-50
Identity = 87/148 (58.78%), Postives = 103/148 (69.59%), Query Frame = 0
Query:    5 TSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEY--ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD 150
            TS TG WLL  +L++  G      G+  GGD DELR+ ST  T  N +R HGGSL F +T V SWDT   SP +D  DGRS+I+ +SE   + DETC+G  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD
Sbjct:   97 TSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFIN-LRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFD 243          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 2.720e-49
Identity = 87/148 (58.78%), Postives = 103/148 (69.59%), Query Frame = 0
Query:    5 TSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEY--ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD 150
            TS TG WLL  +L++  G      G+  GGD DELR+ ST  T  N +R HGGSL F +T V SWDT   SP +D  DGRS+I+ +SE   + DETC+G  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD
Sbjct:   97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFIN-LRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFD 243          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.260e-47
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0
Query:    6 SVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDE--TCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD 150
            S TG WLL S L IL G   Y  G S GGD D LRIQST   DF E+RG GGSL F  T VTSWDT       +YE GRSFINCV++++  +  +C G+   + GECRMDIIDS MG +GWFD+ESYGLTWKVRG C+D SN E+ D
Sbjct:  449 SPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMD 594          
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 8.440e-47
Identity = 83/145 (57.24%), Postives = 98/145 (67.59%), Query Frame = 0
Query:    8 TGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEY--ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD 150
            TG WLL  +L++  G      G   GGD DELR+ ST  T  N +R HGGSL F  T V SWDT   SP +D  DGRS+I+ +SE   + DETC+G  KN  GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNP +FD
Sbjct:  103 TGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYIN-LRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFD 246          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig888.20254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIU4_ECTSI7.930e-7672.48Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LRM4_ECTSI1.900e-7371.14Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE1.600e-7167.72MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KWQ2_9PHAE3.810e-7165.81MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI3.970e-6968.71Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FRR8_ECTSI1.870e-5961.90Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI3.290e-5058.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.720e-4958.78Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FWE8_ECTSI1.260e-4758.50Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JU98_9PHAE8.440e-4757.24MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..151
e-value: 3.0E-26
score: 94.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig888contigF-serratus_M_contig888:183501..183953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig888.20254.1mRNA_F-serratus_M_contig888.20254.1Fucus serratus malemRNAF-serratus_M_contig888 183485..183953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig888.20254.1 ID=prot_F-serratus_M_contig888.20254.1|Name=mRNA_F-serratus_M_contig888.20254.1|organism=Fucus serratus male|type=polypeptide|length=151bp
MYSPTSVTGKWLLASDLHILRGSIFYCRGASIGGDCDELRIQSTGSTDFN
EVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCD
GQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold