mRNA_F-serratus_M_contig885.20230.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 279 bits (713), Expect = 1.870e-82 Identity = 141/295 (47.80%), Postives = 183/295 (62.03%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIGSLDKDK-AVMGASGSGALF------------FHERFEEVIPEPQV---------EGCKKACGAGHDSETG-----LSSVCDPTCLSGESLAGSRFNGHDCGAGDPVKYGKTCRLCFEDQEAALVADK 806
CF R+V ANL QEEN +P S QFYKL+LD VR Q+ +YD LA+I+W+++VAHD SFE+LYA AF + FW+KGS L G FH+ L E H+LGH++GNAIYNN DP FV++VN+T +RW SYDVALW T+SD+PYSWPLWQR+S KFVA +++ +G D D+ AV+ A S LF FH + P + E C +CG G +G L++VCD +C SG L G+RF G+ CGAGD +YG CR CF D E A A++
Sbjct: 185 CFANTRLVLANLSQEENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALATVCDRSCYSGGEL-GARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEE 478
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE) HSP 1 Score: 253 bits (645), Expect = 3.590e-73 Identity = 127/279 (45.52%), Postives = 166/279 (59.50%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIGSLDKD-KAVMGASGSGALFFHERFEE-----VIPEPQVEGCKKACGAGHDSE------TGLSSVCDPTCLSGESLAGSRFNGHDCGAGDPVKYGKTCRLCFEDQEAALVAD 803
CF R+V A+ ++N P S QFYKL+LD +R Q ADYD LA+++WN++VAHD SFE+LY AF + FWVKGS L H+I SE +GH++GNAIYNN D FVDYVNFT +RW YD ALW T+SD+PYSWPLWQR+S KFV T++++ +G D D + ++ A G LF H + V E C +CG + +G ++VCD +C +G G+RF GH CGAGD YG CR CF D A A+
Sbjct: 155 CFARTRLVLAHASDKDNERPKMASIQFYKLYLDSTIRCQFADYDALAVMEWNVIVAHDRSFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGGVSMVGSNELAERCTVSCGFRFPNAHATMAPSGTATVCDRSCYAG-GRDGARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAE 432
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 223 bits (568), Expect = 9.900e-63 Identity = 97/168 (57.74%), Postives = 131/168 (77.98%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIG 506
CF R+V ANL QE++ +P S FY +FLD VR+ +++YD L++I+W+++VA DNSFE+LY AF ++ FWVKGS L G+ FH A SEMW +LGH++GNAIYNN+DP FV+YV +TRSRWG + YDVALW T+SD+PYSWPL+QRYSSKFV T+++S++G
Sbjct: 95 CFSRTRIVYANLAQEDDIYPRGPSVMFYNMFLDESVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVG 262
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 221 bits (563), Expect = 4.600e-62 Identity = 101/190 (53.16%), Postives = 138/190 (72.63%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIG--SLDKDKAVMGASGSGALFFH 566
CF R+V ANL +E++ +P S FYK+FLD VR+ +++YD L++++W+++VA DNSFE+LY AF ++ FWVKGS L G+ FH A SEMW +LGH++GNAIYNN+DP FV+YV +TR+RWG + YDVALW T+SD+PYSWPL+QRYSSKFV T+++S +G + D V A LF H
Sbjct: 92 CFSRTRVVYANLAEEDDIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHD-TVSDAVAGKTLFIH 280
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 220 bits (561), Expect = 6.130e-62 Identity = 100/190 (52.63%), Postives = 139/190 (73.16%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIG--SLDKDKAVMGASGSGALFFH 566
CF R+V ANL +E++ +P S FY +FLD +VR+ +++YD L++I+W+++VA DNSFE+LY AF ++ FWVKGS L G+ FH A EMW +LGH++GNAIYNN+DP FV+YV +TR+RWG + YDVALW T+SD+PYSWPL+QRYSSKFV T+++S++G ++ D V A LF H
Sbjct: 91 CFARTRIVFANLAEEDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHD-TVSDAIAGNTLFIH 279
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: A0A6H5JMG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG7_9PHAE) HSP 1 Score: 206 bits (524), Expect = 6.340e-62 Identity = 90/164 (54.88%), Postives = 126/164 (76.83%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIV 494
CF R V A+L Q+E+ +P S F+K+FLD VRA++++YD LA+I+W+++VA D SFE+LY AF ++ FWVKGS L G+ FH A +++MW ++GH++GNAIYNNNDP F +YV++TR+R+ Y YDVALW T+SD+PYSWPL+QRYS KFV T++V
Sbjct: 120 CFAEVRTVYAHLEQDEDMYPKGPSVMFFKMFLDEGVRAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLV 283
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 220 bits (561), Expect = 8.790e-62 Identity = 101/190 (53.16%), Postives = 138/190 (72.63%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIG--SLDKDKAVMGASGSGALFFH 566
CF R+V ANL +E++ +P S FY +FLD VR+ ++ YD L++I+W+++VA DNSFE+LY AF ++ FWVKGS L G+ FH A EMWH+LGH++GNAIYNN+DP FV+YV +TR+RWG + YDVALW T+SD+PYSWPL+QRYSSKFV T+++S++G ++ D V A LF H
Sbjct: 93 CFSRTRIVYANLAEEDDIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHD-TVSDAVAGKTLFIH 281
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 216 bits (551), Expect = 1.140e-60 Identity = 94/175 (53.71%), Postives = 132/175 (75.43%), Query Frame = 3
Query: 45 EENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIGSLDKDKAVMG-ASGSGALFFH 566
+EN +P S QFYKLFL+ ++ ++ + +A+I+W+++VAHD SFE+LY AF + FWVKGS LAG+ FH +++ WHMLGH++GNAIYNN+DP F D+V FT +RWG +YSYDVALW T+SD+PYSWPLWQR+SSKFV+T++++ +G LD D+ +G A S +F H
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIH 202
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE) HSP 1 Score: 212 bits (539), Expect = 6.900e-59 Identity = 97/209 (46.41%), Postives = 140/209 (66.99%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIGSLDKDKA-VMGASGSGALFFHERFEEVIPEPQVEGCKKACG 626
CF V A+L +E++ +P S FYK+FLD +R+ ++YD LA+++W+++VA D SFE+LY AF ++ FWVKGS L G+ FH + +S+MWH+LGH++GNAIYNN D FV+YV++TRSRW Y YDVALW T+SD+PYSWPL+QR+S+KFV T++++ +G D V A LF H + + V+ +A G
Sbjct: 104 CFAKTLTVYAHLSEEDDVYPRGPSVMFYKMFLDERIRSNFSEYDALAILEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVQKVNEANG 312
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 211 bits (537), Expect = 8.230e-59 Identity = 98/190 (51.58%), Postives = 136/190 (71.58%), Query Frame = 3
Query: 3 CFGTPRMVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAHDNSFEQLYAHAFSSSDTFWVKGSRLAGSQFHDIAALSEMWHMLGHMDGNAIYNNNDPFFVDYVNFTRSRWGMAYSYDVALWTTMSDYPYSWPLWQRYSSKFVATSIVSTIG--SLDKDKAVMGASGSGALFFH 566
CF R V A+L QEE+ +P S F+K+FLD V A++++YD LA+I+W+++VA D SFE+LY AF ++ FWVKGS L G+ FH A +++MW ++GH++GNAIYNNNDP F +YV++TR+R+ Y YDVALW T+SD+PYSWPL+QRYS KFV T+++S +G +D D V A LF H
Sbjct: 36 CFADVRTVYAHLEQEEDVYPKGPSVMFFKMFLDEGVHAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLISYVGYEHVDHD-TVSDAIAGQTLFIH 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig885.20230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig885.20230.1 >prot_F-serratus_M_contig885.20230.1 ID=prot_F-serratus_M_contig885.20230.1|Name=mRNA_F-serratus_M_contig885.20230.1|organism=Fucus serratus male|type=polypeptide|length=263bp MVSANLHQEENRHPMARSFQFYKLFLDPEVRAQVADYDTLALIDWNMVVAback to top mRNA from alignment at F-serratus_M_contig885:118958..127769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig885.20230.1 ID=mRNA_F-serratus_M_contig885.20230.1|Name=mRNA_F-serratus_M_contig885.20230.1|organism=Fucus serratus male|type=mRNA|length=8812bp|location=Sequence derived from alignment at F-serratus_M_contig885:118958..127769+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig885:118958..127769+ >mRNA_F-serratus_M_contig885.20230.1 ID=mRNA_F-serratus_M_contig885.20230.1|Name=mRNA_F-serratus_M_contig885.20230.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig885:118958..127769+ (Fucus serratus male)back to top |