mRNA_F-serratus_M_contig885.20234.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig885.20234.1 vs. uniprot
Match: D7FZ31_ECTSI (Viral A-type inclusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ31_ECTSI) HSP 1 Score: 372 bits (954), Expect = 3.970e-99 Identity = 699/1370 (51.02%), Postives = 824/1370 (60.15%), Query Frame = 3
Query: 2124 QSLFIDLNITLYKCSTMVKTAEEDRADALRRLAAAEEQAAQVSAKLKYTEALEVRAEAAEKSLSELRAKQSQLDEAAHDFKRRERLVAEREGAARAWETSLRSERSAAQQALSDAATRVRETEERDALLKDREQALEVRLQELGLLKEEQRKTLKSAALQHQAQRKDLDRQKQQVAESLRRSAASFLWSRVASLPRRRLENAWLTWRLRGLDVGSEALREGEAEARARAAELQASMERGLHELRVGKEGLEEEAARVEQVRRRAEADLRQVGRQHKEALALKEKAARDLSDAEARRAALEKERHALRSEADSAQTLAKTIARDKAVVENSQRMVSEEAKELDKRRTALEDIQEIGRRELDAXXXXXXXXXXGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREELQRVRSDLDRFTARVGEEKAAXXXQMSELEKKEASVASREESIRALGAETEXXXXXAGRVIKDLDRERTELRAWXXXXXGRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRATGRELGISLDQGRSVLGRERGKXXXXXXXXXXXXLAIEADRDDLEKTRGQLRQREVALSLKETTLDSREAEVRRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEVEARLRRKEEEMDHARALLETAREDALNHARVAEKATSEARELRVAME---------------------------------------EATEELSGKEAKAKGVQEAVKAXXXXXXXXXXXXXXXXXDNRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALLKAAKAAEATTLEEEHKAEAVRSELSRSRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKREAAAEADKLDERREFLEREDAK-------VQQESQRLSESFLAQKSELEGSMRISEERVKISDGKVAALQRELNTIRRTLSGVEAERDQALEAVGELSSKTDSLEGQLERLGNLLKQAQDRTAEKAKQLMDTERSWSDVLARSKDESSSQVQDRESRLRHAMQELDETRKALAEARKAADTTAADL-------SDSRARTSELHKLGVDMERELTAMLQDKEEMEASRRRKEEGWQSLMGEKDSEIDHLKHRVLDLERTRSEVEKKLEQHAKDELXXXXXXXXXXXXXXXXXXXXXXXSTSRAAELHKRHEESRAGVEAASRGMRELRQQIARLEENNDGLSSRLRQREEELGEAALLMTETKDDLKALRGQAKKAIDLSQRLQAAEAASTLLQEELEETRQTLTW 6074
+SL D +C K AE +R DA+ RL A E+ A + +L +TE+L+ RAEAAE+SLS LR K S++D+A HD RRERLV EREGAARAWE+SLRSE+++A+QALS+A RV+ +EER+A LK+ E RL LK+ QR+ LK A +H A+RK+LD ++ + LRRSAASFL+SR++SLPRRRLE AWL RLRG+D SEALRE EAEAR RA+ELQASMERGL ELRVGKEGLEEEAARV+Q R R EADLRQV RQHKE L LKEKA+ XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXX XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+R TGRE+G+SLDQGRSVLGRER K A++ D +L+ +R QL+++E L+ L++REAE +R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V R +LE AR+DA NHAR AE AT EAR L+ +E EA+E S EA + + XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LL AKAAE+ E E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R++A+ + Q+SQRL+ SFL QK ELEG+ R +EER +D K++A+ LG LL++A+ R +EKA+QL ERSW + L++SKD S++ VQDRE+RL A Q L++T+K L AR+ A AA+L S SRARTSELH LGVDMERELTAML+DKE+ A+R EE W++ E+D +I+ L+ R+L+ ER + E E KLEQ E S SRA EL +RH E RAGVEAASRGM+ELR+++ RLEE+++GLSSRLRQR++EL EAA LMTET+ DL ALR ++K+ +S+RL+AAEAA+TLL+EEL ETRQ ++W
Sbjct: 841 ESLARDAAAERDRCVERAKVAESERGDAVVRLRTAMEELAGLKGRLSHTESLQARAEAAEESLSLLRVKLSEMDDAKHDVNRRERLVGEREGAARAWESSLRSEQASARQALSEAGARVKLSEEREASLKEAEXXXXXRLXXXXRLKQXQREALKEKAAEHNAKRKELDEAGRKAHQDLRRSAASFLFSRLSSLPRRRLEGAWLQLRLRGVDADSEALREREAEARGRASELQASMERGLQELRVGKEGLEEEAARVQQARVRVEADLRQVARQHKEVLHLKEKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDTGREVGLSLDQGRSVLGRERDKLRDEADNLARRRRALDVDLAELDASRNQLQEKETGLASTTRALETREAEAKRLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXARXXXXXXXXXDMLEQARKDAENHAREAEAATLEARSLKEDLEGSWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEASESTSKLEADRLSQERNFRERSEALEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLLKAKAAESALKEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEAELYQAKDDILQQSQRLTSSFLEQKGELEGTTRRAEERASAADAKLSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLGRLLEEARKRVSEKAQQLQHAERSWDEALSKSKDASATLVQDREARLVQANQGLEDTKKDLELAREEAAAIAAELQREQEALSVSRARTSELHTLGVDMERELTAMLKDKEQAAAARELAEEEWRAKAEERDGQIERLEGRLLEAERAQGEAEDKLEQ-VSSEACLARERVDQVLEELEDAKEGMQRSDSRAQELQRRHSEGRAGVEAASRGMKELRRELNRLEEHSEGLSSRLRQRDQELAEAAALMTETQRDLTALRNRSKEMEQVSERLEAAEAAATLLKEELTETRQAVSW 2209
BLAST of mRNA_F-serratus_M_contig885.20234.1 vs. uniprot
Match: A0A6H5KJI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI0_9PHAE) HSP 1 Score: 343 bits (880), Expect = 1.870e-90 Identity = 291/633 (45.97%), Postives = 353/633 (55.77%), Query Frame = 1
Query: 49 ELRNALARAIGALRNACVGAASSTAELLGGEDPTGFAEEVRALASAHEKELAAELTKGTIEGAGHTGNENKEVSTTGSAATQGH-----------------VGRSG----TGLEFWSRQSDLWSGVFAEQQMGLLQMVRAQEAELRQGKRRISSLERELAVLNDRR----------AAAAVAAGSEGQRAG----RGQSSRSLGEKEASEWRQRLERMQADYERRSASLQGREVAIEAAEQRLKIRATELXXXXXXXXXXXXXXXXXXXXXXXXGKEAAERHRKLSAWQAALEKREEEAEDLTERSRHQDEAERRVREWERESQKRLSLMEEQLSLXXXXXXXXXXXXXKARQEIAEREKVVERGELQGMEATETRAAEEKEALDREASRLRQEKAKLDVFSRHVKDKGDKQLREELQREAQRLSRKEREGKLNLDKIRRDLKRREDAVQDEAKEVETLKKAAEEALALARQERDRVERERDEMLKGFQEIRTDLEVFLTEKKEDALRRGQESLTKAKERWERERKRATENRNHELSTALRRAEADRDLAVRESEAKVKSARELEDRLHTRLEEADKREEGARLAASKCNATLSSLEKDAAEVEALKQGLDHRLRQAEKDAQALAASERELTR 1842
ELR ALAR IGALRNACVGAASSTAELLGGEDPTGFA+EVRALA+AHEKEL L E+KE A V SG GLEFWSRQSDLWSGVF EQQ GLLQMVRAQEAELRQGKRRISSLE+ELA L+++R A A AAG EG++ G G + RSL E E ++WR+RLERMQA++ERR +++Q RE A++AAE R++ RA EL K+AAER RKL+ WQA L+KRE AED+ ERSRH +E ER+ L L+EEQLS+ XXXXXX KAR+EIAERE+ V+R + + + EKE LD+E +RLRQE+ +LD +R + +K REAQRLSR + EGK+ L K KE AL R ++ L++AK+R++RER +A +N E ++RRAEA+RDLAV ESEA KSARELE RL A AA+KC TLSSLE DAAEV+ALK+GLD R RQAEK+A A E+EL R
Sbjct: 152 ELRVALARTIGALRNACVGAASSTAELLGGEDPTGFAQEVRALANAHEKELEQALV------------EDKEGQLGAPTAAXXXXXXXXXXXXXXXXDVVPVASSGPAVAVGLEFWSRQSDLWSGVFTEQQTGLLQMVRAQEAELRQGKRRISSLEQELAALDEKRKEIVAAAXXXTANASAAGKEGRKGGSNRDEGHADRSLKESEVNDWRRRLERMQAEHERRLSAVQEREAAVQAAELRVEGRARELGSERDRLAAGAVALSAEADGLRAGAKDAAERERKLALWQAGLDKRELAAEDVRERSRHLEEMERQXXXXXXXXXXSLLLLEEQLSVKEKXXXXXXADLEKARREIAEREEAVQRDRREAYSKVQDESRLEKERLDKEVARLRQEERRLDGLNRELDEK-TLXXXXXXXREAQRLSRAQEEGKIALAKDXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAALGRERDGLSRAKDRFDRERAKAARLQNQESIASVRRAEAERDLAVEESEAAKKSARELESRLXXXXXXXXXXXXXAEEAATKCGVTLSSLEGDAAEVDALKKGLDRRHRQAEKEAAEFAVREQELAR 766 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig885.20234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig885.20234.1 >prot_F-serratus_M_contig885.20234.1 ID=prot_F-serratus_M_contig885.20234.1|Name=mRNA_F-serratus_M_contig885.20234.1|organism=Fucus serratus male|type=polypeptide|length=2620bp MVKTAEEDRADALRRLAAAEEQAAQVSAKLKYTEALEVRAEAAEKSLSELback to top mRNA from alignment at F-serratus_M_contig885:312935..352434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig885.20234.1 ID=mRNA_F-serratus_M_contig885.20234.1|Name=mRNA_F-serratus_M_contig885.20234.1|organism=Fucus serratus male|type=mRNA|length=39500bp|location=Sequence derived from alignment at F-serratus_M_contig885:312935..352434+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig885:312935..352434+ >mRNA_F-serratus_M_contig885.20234.1 ID=mRNA_F-serratus_M_contig885.20234.1|Name=mRNA_F-serratus_M_contig885.20234.1|organism=Fucus serratus male|type=CDS|length=15720bp|location=Sequence derived from alignment at F-serratus_M_contig885:312935..352434+ (Fucus serratus male)back to top |