prot_F-serratus_M_contig884.20227.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig884.20227.1
Unique Nameprot_F-serratus_M_contig884.20227.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length294
Homology
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BLAST of mRNA_F-serratus_M_contig884.20227.1 vs. uniprot
Match: A0A6H5KLC2_9PHAE (FHA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC2_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 8.690e-56
Identity = 127/250 (50.80%), Postives = 152/250 (60.80%), Query Frame = 0 
Query:   60 PPRRADTPCPAKFQTDRRMQ------YVLLPD---DGRRFIALRTGTT-VVGRGRNTGIRDQHVSRRHVEVTVPEKGTMGSLQGYCSIKYIGRNCRAVLVGGILLKPGQEVPAGPGTKVTLNHNNKGLTRYSYTLIPANKLSAFV-RLVKGGGGQQAVTAETATTRRREPNSAL----DANLENPSQQRQVDEQYEKFMKMLRRMQPLTQSLETIKQRRVH--WHFRKEAQDKLQREREEILKKFGDLKF 292
            P RRA TPCPA  +  R+ Q       +LLPD     RRFI L  GTT VVGR + +GIRD HVSRRHVE+T PE+G  G  QG+C IKYIGRNCR VL+GGILLK GQEVPA PGT+V LN+NNKGL RYSYTL+PAN L A   R      G  A  A      R  P S+     D+++E  S ++Q    +     +    +P   S    KQ+R      FRKEAQ+KLQ+ER+EI  KF DLKF
Sbjct:   50 PIRRAGTPCPAALRWRRQQQDGSIGRLILLPDRAETSRRFIPLEPGTTTVVGRCKKSGIRDHHVSRRHVEITAPEEGDEGFAQGHCRIKYIGRNCRVVLIGGILLKSGQEVPAAPGTRVVLNYNNKGLPRYSYTLLPANNLPATTPRTAHCSVGMGAAGAGDGRPWRGGPVSSSHRLGDSDMEMGSGRKQP---FHGDAHLHAYNRPSRYSTIASKQQRPRPGGRFRKEAQEKLQKERDEIFSKFADLKF 296
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig884.20227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLC2_9PHAE8.690e-5650.80FHA_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.200.20coord: 75..183
e-value: 2.6E-9
score: 38.8
IPR041388PNK, FHA domainPFAMPF17913FHA_2coord: 91..172
e-value: 1.0E-6
score: 28.9
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 78..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig884contigF-serratus_M_contig884:306623..319841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig884.20227.1mRNA_F-serratus_M_contig884.20227.1Fucus serratus malemRNAF-serratus_M_contig884 305517..320172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig884.20227.1 ID=prot_F-serratus_M_contig884.20227.1|Name=mRNA_F-serratus_M_contig884.20227.1|organism=Fucus serratus male|type=polypeptide|length=294bp
MDLSTTGGGFSGPPLPSETLLRAGWAASHQPQGVAALGASTTMFNASHLT
PDHQPRPQPPPRRADTPCPAKFQTDRRMQYVLLPDDGRRFIALRTGTTVV
GRGRNTGIRDQHVSRRHVEVTVPEKGTMGSLQGYCSIKYIGRNCRAVLVG
GILLKPGQEVPAGPGTKVTLNHNNKGLTRYSYTLIPANKLSAFVRLVKGG
GGQQAVTAETATTRRREPNSALDANLENPSQQRQVDEQYEKFMKMLRRMQ
PLTQSLETIKQRRVHWHFRKEAQDKLQREREEILKKFGDLKFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041388FHA_2
IPR008984SMAD_FHA_dom_sf