prot_F-serratus_M_contig884.20225.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig884.20225.1
Unique Nameprot_F-serratus_M_contig884.20225.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length346
Homology
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BLAST of mRNA_F-serratus_M_contig884.20225.1 vs. uniprot
Match: D8LR43_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LR43_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 6.480e-57
Identity = 211/317 (66.56%), Postives = 245/317 (77.29%), Query Frame = 0 
Query:   28 SQDPCCSTDADCLALLSDEQMVYNDRFEKTLVCDMGCPGKLNCNMFGLCDFCRGCFTTCEGVMTYLDETNASEDNIFFCPTGEVEELSECYEATSGSGGTGSASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSRIADIPGCTCGEAELDDATTAFFCDFGESSMYCDLECVDGSDTMNRLFPEMGGLWCKPFGYEGCRLCMFDCTDYDGEYCVPCPEGVKQWC 344
            S   CCS D+DC  LLS   + +N  F KT+ CD  CPG +NCNMFG+C+ CRGCF TCEG M ++++T +  + I FC    + ++++C +   GSG       +XXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXX   R+A+I GC CG AEL+ A  A+FC+ G+S MYCDLECVDGSD  + LFP MGGLWC+P G+EGCR+C FDCTDY+G++CVPCP G+K WC
Sbjct:   23 SAQSCCSQDSDCTELLSPADIEHNSIFSKTVECDQDCPGLINCNMFGICEQCRGCFETCEGAMLFMEKTGSPAEYITFCSGIGIADMAQCEDDVYGSG-------AXXXXXXXXXXXXXXXXXXXGGSEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXTGIASXXXXXXXXXXXXXXXXXXXXXXXXXRVAEIEGCDCGTAELEPAFAAYFCENGKS-MYCDLECVDGSDPDDVLFPSMGGLWCQPEGWEGCRMCKFDCTDYEGDFCVPCPSGLKNWC 331
[Close]
BLAST of mRNA_F-serratus_M_contig884.20225.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.680e-5
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 0 
Query:   31 PCCSTDADCLALLSDEQMVYNDRFEKTLVCDMGCPGKLNCNMFGLCDFCRGCFTTCEGVMTYLDET-----NASEDNIF-FCPTGEVEELSECY 118
            P CS D+   A      +  ND + +    +   P  L CN  GL   CRGCF TC G +TY+D+         ED +  FCP  EV +L+EC+
Sbjct:  582 PSCSMDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHILEYGEDAVINFCPQSEVSDLAECH 675
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig884.20225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR43_ECTSI6.480e-5766.56Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
D8LDU6_ECTSI1.680e-536.17N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37612FAMILY NOT NAMEDcoord: 121..255
NoneNo IPR availablePANTHERPTHR37612:SF6coord: 121..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..345
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.621

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig884contigF-serratus_M_contig884:248724..254054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig884.20225.1mRNA_F-serratus_M_contig884.20225.1Fucus serratus malemRNAF-serratus_M_contig884 248485..254054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig884.20225.1 ID=prot_F-serratus_M_contig884.20225.1|Name=mRNA_F-serratus_M_contig884.20225.1|organism=Fucus serratus male|type=polypeptide|length=346bp
MQAVMKLSPAFRLAAAAAAAAMVVIAQSQDPCCSTDADCLALLSDEQMVY
NDRFEKTLVCDMGCPGKLNCNMFGLCDFCRGCFTTCEGVMTYLDETNASE
DNIFFCPTGEVEELSECYEATSGSGGTGSASGSGTGSASGSGTGSASGSG
TGSASGSGTGSASGSGTGSASGSGTGSASGSGTGVGTGSGSTSGSGMGSA
SGSGIGSASGSGTGSASGSGTGSASGSGTGSASGSGTGSASGSGTGSASG
SASSRIADIPGCTCGEAELDDATTAFFCDFGESSMYCDLECVDGSDTMNR
LFPEMGGLWCKPFGYEGCRLCMFDCTDYDGEYCVPCPEGVKQWCP*
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