mRNA_F-serratus_M_contig883.20219.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig883.20219.1
Unique NamemRNA_F-serratus_M_contig883.20219.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: D7FP98_ECTSI (Flagellar radial spoke protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP98_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.740e-120
Identity = 211/416 (50.72%), Postives = 278/416 (66.83%), Query Frame = 1
Query:  154 DPLGPVNIHHDPRIARGSTFAGNRIDT--SAEQLAKLKTKGKPRSRMRRGRLRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWTTPIIQ-----FLPWLFERVAAEVDKSFSASEVVESLFDEAKERAAAALADRVESTLRELEAAEKAARTARDRVIDLFVPAELVGGEVGQRFGPISVRAGETVRAVEQRVIGWLEADGRVEEVTAPEGGFLAGYLREARKRSRGIRLAKASLLMELQEVMGV-SNDVLLQAAFD 1377
            DP  P+NIHHDPR+ARG+TFAG+R D   SAE   K   K K R R+ + R RG SS F     SQ  LREELD SR+L++P D   R + +A T TDDF+ERPQTPD++PKKTGVD  TQ+    KLFD+  E+QP+L VLVGKTL+QAR+EVEREHEL CI   A  L   R +E  ++ +L +AA+ AE+              +RR  KEKVA LQLVRQVLPL+L+ AFE+L  KSW T  +Q     FLPWLF RVAA+V +  S  + ++SL +   E A  A   R++   RE EA  +AAR AR+RVI LFVP E+VGGE G+R GP++V+AGETV+A E +V  WL  +    E+  P+GGFL GYLREAR++  G R+ + S+L++LQ ++G  S++V+L++ F+
Sbjct:   46 DPFFPINIHHDPRVARGNTFAGDRRDAQPSAEPGPKTVAK-KSRKRLGQSRSRGSSSSFFDTRASQPVLREELDLSRYLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKTLEQARMEVEREHELLCIREAATALVHQRAEEVQQVLELKQAAVEAEKXXXXXXXXXXXXXNRRRLAKEKVACLQLVRQVLPLSLDRAFEQLSAKSWETQSVQQIKKVFLPWLFGRVAADVGQRSSVLDALDSLLESVDETAETARNQRIQDRDREAEARREAARVARERVIRLFVPGEVVGGEEGERLGPVAVKAGETVKAAEAKVARWLAKERETGELEDPQGGFLGGYLREARRKGGGRRVGQGSMLLDLQVMLGAPSDEVVLRSNFE 460          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: A0A6H5KBC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC6_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.730e-81
Identity = 153/339 (45.13%), Postives = 209/339 (61.65%), Query Frame = 1
Query:  379 HLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWTTPIIQ-----FLPWLFERVAAEVDKSFSASEVVESLFDEAKERAAAALADRVESTLRELEAAEKAARTARDRVIDLFVPAELVGGEVGQRFGPISVRAGETVRAVEQRVIGWLEADGRVEEVTAPEGGFLAGYLREARKRSRGIRLAKASLLMELQEVMGV-SNDVLLQAAFD 1377
            +L++P D   R + +A T TDDF+ERPQTPD++PKKTGVD  TQ+    KLFD+  E+QP+L VLVGK L+                                   L +AA+ AE++ E      RE A  RR  KEKVA LQLVRQVLPL+L+ AFE+L  KSW T  +Q     FLPWLF RVAA++ +  S  + + SL +   E A  A   R++   RE E   +AAR AR+RVI LFVP E+VGGE G+R GP++V+AGETV+A E +V  WL  +   EE+  P+GGFL GYLREAR++  G R+ + S+L++LQ ++G  S++V+L++ F+
Sbjct:   20 YLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKVLE-----------------------------------LKQAAVEAEKKKEXXXXXXREEANHRRLAKEKVACLQLVRQVLPLSLDRAFEQLSAKSWQTQSVQQIKKVFLPWLFGRVAADLGQRSSVLDALGSLLESVDETAETARIQRIQDRDREAETRREAAREARERVIRLFVPGEVVGGEEGERLGPVAVKAGETVKAAEAKVASWLAIERETEELEIPQGGFLGGYLREARRKGGGRRVGQGSMLLDLQAMLGAPSDEVVLRSNFE 323          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: A0A835YQI5_9STRA (Radial spoke protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.030e-35
Identity = 131/417 (31.41%), Postives = 197/417 (47.24%), Query Frame = 1
Query:  118 FRSDIQHQQDPL------DPLGPVNIHHDPRIARGSTFAGNRIDTSAEQLAKLKTKGKPRSRMRRGRLRGPSS--------LFETAAPSQRSLREELDFSRHLIDPR-----DAVVRLQLQAG-------------THTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKS-WTTPII-----QFLPWLFERVAAEVDKSFSASEVVESLFDEAKERAAAALADRVESTLRELEAAEKAARTARDRVIDLFVPAELVGGEVGQRFGPISVRAGETVRAVEQRVIGWLEADGRVEEVTAPEGGFLA 1254
            +R D+  Q D        D   P+NIH DPR+AR +T+A   +      L  + T    + R++ GR+   +S        L++    +  + ++ELD S++L+ P      DA  R+  Q               T TD+F E+P    Y     G D +T++    +LFD++REI+PLLDVL+GKTL+QA++EVER  EL+ IA+        R  EA    +L+ AA+                A  R    +KVA++ ++RQ  P  L  A E L     W  P       +F+PWL + V A      +A  V + L +EA  R  A LA+  E+ ++       AA  A      L+V    VG E G + GP++V    ++ AVE+ +  W E +G   EV  PEGGFL+
Sbjct:   25 YRGDVVQQDDDALTEPDTDDYYPINIHQDPRVARVNTYARRPV------LPPIGTASSSKKRVKPGRVVSIASQRAALSAQLYDPNYGTYNNQKQELDLSKYLVAPEPQIEDDASERINRQRAPASMPFYGFSDSVTQTDEFAEKPDEVYYKQPLGGADAATEV-INTELFDFDREIKPLLDVLIGKTLEQAKLEVERSWELQQIAQATDRFNAERVAEARAQEQLEAAAIERXXXXXXXXXXXXXXALSRWQATQKVAAVCMMRQCWPGVLRGACEALRAAGRWCEPRAIDIADEFMPWLLDSVGARAGALSAAYAVTDGLCEEALRRGEA-LAEAHEAAVQREAKEAAAASAAAGATTQLWVEGAAVGLE-GGKLGPVTVTNDSSIAAVEKSIADWFEENGLAAEV--PEGGFLS 430          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: F0Y5T0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5T0_AURAN)

HSP 1 Score: 116 bits (290), Expect = 4.380e-25
Identity = 97/290 (33.45%), Postives = 147/290 (50.69%), Query Frame = 1
Query:  163 GPVNIHHDPRIARGSTFAGNRI----DTSAEQLAKLKTKGKPRSRMRRGRLRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELE-RKSWTTPIIQ-----FLPWLFERVAAEVDKSFSASEVVESLF----DEAKER 990
            GP+NI  DPR+ RGST++  R         E        G P  + RR + +        A PS  S ++ LD + +L++   A   ++  A   TD F E+P    + P KTGVD ST +    + F +N E+QPLL VLV KTL+QA +EVE+E EL  IA + +     +  E +R+  +++A +  E+         R A  + ++   KVAS +LV Q+LP   E A+   E R SW  P++       LPWL+ RV  E+  +   +++V+ L     D+AK R
Sbjct:   40 GPLNIMSDPRVVRGSTYSLYRSLPGDGAPMEDTVPPTPGGAPARKARRKKKKADGRSIFDAKPSSNS-KQALDLTPYLVEKEYASSAVEEAA--QTDGFLEQPPPAPFAPPKTGVDASTSMED-DQPFVFNNEVQPLLAVLVSKTLEQAMLEVEQEEELAAIADDMSDKLARQAAEKARVEAMEQAEVDREKAKLGDFESARAALVEEQTLARKVASSRLVDQLLPEIFEGAYRHFEDRGSWVEPVLHEIKATTLPWLYARVDEELGGADLGAKLVDDLLQYCVDQAKMR 325          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: D7G937_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G937_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.320e-25
Identity = 89/289 (30.80%), Postives = 150/289 (51.90%), Query Frame = 1
Query:  160 LGPVNIHHDPRIARGSTFAGNRIDTSAEQLAKLKTKGKPRSRMRRGRLRGP-----SSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKS-WTTPIIQ-----FLPWLFERVAAEVDKSFSASEVVESLFDEAKERA 993
            L   NI +D R+ RG+T+A   +  SA++ + L+ + +   RMR   LR       S++  T  P Q  +  +      L +  D  V   ++  T T+ F +RP +P ++P K+GVD  TQ+  +G+LFD++ E++P+L+VLVGKTL+ + +E+  E EL  I R  AT  R R+ E + + +++  A     E     ++ +E  + R +  EKVA+    +  L       F++LE +  +  P+ +     FLPWL   +  +VDK+  +  VV+ L   A E A
Sbjct:   36 LASNNIMYDRRVVRGNTYAAQVVTQSAQRES-LRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIE--TQTEAFMDRPSSPLFVPAKSGVDADTQV-VVGELFDFDLEVEPILEVLVGKTLELSVLELMEEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHA 320          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: UPI00148F8BE7 (radial spoke head protein 3 homolog n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F8BE7)

HSP 1 Score: 114 bits (286), Expect = 8.420e-25
Identity = 91/282 (32.27%), Postives = 146/282 (51.77%), Query Frame = 1
Query:  172 NIHHDPRIARGSTFAGNRIDTSAEQ-LAKLKTKGKPRSR-MRRGRLRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWTTPIIQ------FLPWLFERVAAEVDKSFSASEVVESL-FDEAKER 990
            NI +D R+ RG+T+A + I T+ +Q LA L+ + + R R + R R +     F    P     R  +D    L     + V +       TDDF +RP TP +IP K+G D+ TQ+   G+LFD++RE+QPLL+VLVGKT++Q+  EV  E EL  +  +    +  R +E + + +L E              + REA ++ R T EK+A+    ++ L     S F  L    +    ++      FLPWL + V   +D+  +A E+++S+ FD A++R
Sbjct:   44 NIMYDRRVVRGNTYAKHIIPTTTQQHLADLQRQQEIRRRAIARKRAQ---EQFRPKTPEALQGRTHVDVQTELYLEELSNVTVAADIECQTDDFLDRPATPLFIPAKSGKDVETQIEE-GELFDFDREVQPLLEVLVGKTIEQSLEEVMEEEELATLKAQQRAFQELRNNELAEVQRLQEQERRXXXXXGHRISQQREALKKERETAEKIAARAYTQKYLADLFPSVFTSLRSNGFFYDPVEKDIETNFLPWLMDEVNNRMDERHTARELLDSIIFDVAQKR 321          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: UPI001FAC462E (radial spoke head protein 3 homolog isoform X1 n=2 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAC462E)

HSP 1 Score: 112 bits (281), Expect = 3.940e-24
Identity = 85/279 (30.47%), Postives = 138/279 (49.46%), Query Frame = 1
Query:  172 NIHHDPRIARGSTFAGNRIDTSAEQLAKLKTKGKPRSRMRRGRLRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWT-TPI-----IQFLPWLFERVAAEVDKSFSASEVVESLFDEAKER 990
            NI +D R+ RG+TFA   I    +Q    K +   R  + R + R       T +P     R+ +D    L     + V         TD+F ++P TP +IP K+GVD  TQ+   G+LFD++ E+QP+L+VLVGKT++Q+ +EV  E EL C+  +    +  R +E + + +L E              + +EA ++ R T EK+A+    +Q L   L S F  L    +   P+     + FLPWL   V  ++ K F A E+++++  E  ++
Sbjct:   44 NIMYDRRVVRGNTFAQYPIPRQTDQSDPAKQQAFKRRAIARRQAR---VHLRTKSPEALQGRQHVDVQTDLYLEELSNVIEATDIDCQTDEFLDKPATPLFIPAKSGVDAGTQIEE-GELFDFDLEVQPVLEVLVGKTIEQSLLEVMEEEELACLRTQQRIFQELRNNELAEVQRLQEQERXXXXXXXXRVAQQKEALKKERETAEKIAAQAFSQQYLAGLLPSVFTSLRNHGYFYDPVEKDIEVNFLPWLMAEVNDQLKKRFVARELLDTIIYEVSQK 318          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: UPI0014715971 (radial spoke head protein 3 homolog n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014715971)

HSP 1 Score: 112 bits (279), Expect = 6.670e-24
Identity = 90/305 (29.51%), Postives = 151/305 (49.51%), Query Frame = 1
Query:   94 TFGPESDAFRSDIQHQQDPLDPLGPV----NIHHDPRIARGSTFAGN--RIDTSAEQLAKLKTKGKPRSRMRRGRLRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWTTPIIQ------FLPWLFERVAAEVDKSFSASEVVESLF 972
            TF     A  +  ++++ P D         NI +DPR+ RG+T+A     I T  + +   + +   R  M R R R    L  T  P Q  +  ++   R+L +  D VV   +Q    TD F +RP TP +IP K+G D+STQ+   G+LFD++ E+QP+L+VLVGKT++Q+ +EV  E EL C+  +    +  R  E + + +L+E                 EA ++ R T EK+A+    +Q L   + + F  L+   +    ++      FLPWL + V   +++   A E+++++ 
Sbjct:    8 TFSSRPRAVENRSKYREPPADQRDVKCHYGNIMYDPRVVRGNTYAKKVIPIKTQPDLVEIQRQEAMRRKAMARKREREQYRL-RTPEPVQGRMHIDIQTDRYLEELSDIVVTADIQC--QTDPFLDRPATPLFIPAKSGKDVSTQIEE-GELFDFDSEVQPILEVLVGKTIEQSLLEVMEEEELACLRAQQRAFEVLRNAELAELQRLEERERXXXXXXXXXXXXXXEALQKERETAEKIAARAYSQQFLANLVPTVFTSLKNHGYIYDPVERDVETNFLPWLMDGVHNILERRNVARELLDNII 308          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: UPI001A98002C (radial spoke head protein 3 homolog n=2 Tax=Percomorphaceae TaxID=1489872 RepID=UPI001A98002C)

HSP 1 Score: 112 bits (279), Expect = 7.660e-24
Identity = 83/283 (29.33%), Postives = 147/283 (51.94%), Query Frame = 1
Query:  172 NIHHDPRIARGSTFAGNRIDTSAE-QLAKLKTKGKPRSR-MRRGRLRGPSSLFETAAPSQRSLREELDFSR--HLIDPRDAVVRLQLQAGTHTDDFKERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWTTPIIQ------FLPWLFERVAAEVDKSFSASEVVESLFDEAKER 990
            NI +D R+ RG+T+A + I T+A+   A+++ + + R R + R R R P   F    P     R+ +D     +L +  D +V   ++    TD F ++P TP +IP K+G D+ TQ+   G+LFD++RE+QP+L+VLVGKT++Q+ +EV  E EL C+  +    +  R +E + + +L E                 E  +Q R T EK+A+    +Q L   L + F  L    +    ++      F PWL   V   ++K ++A ++++++  +  ++
Sbjct:   44 NIMYDRRVVRGNTYAQHIIPTTAQPDPAEIQRQQEIRRRAVARKRAREP---FRPRTPEALQGRKHIDVQTDLYLEELNDVIVATDIEC--QTDAFLDKPATPLFIPAKSGKDVETQIEE-GELFDFDREVQPVLEVLVGKTIEQSLLEVMEEEELACLRAQQRAFEELRNNELAEVQRLQEQXXXXXXXXXXXXXXXXEVLKQERETAEKIAARAYTQQYLADLLPAVFTSLRSHGYFYDPVEKDIETNFFPWLMAEVNNSLEKRYTARQLLDTIIHDVAQK 320          
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Match: A0A067CH65_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH65_SAPPC)

HSP 1 Score: 112 bits (280), Expect = 1.090e-23
Identity = 108/372 (29.03%), Postives = 179/372 (48.12%), Query Frame = 1
Query:  172 NIHHDPRIARGSTFAG-NRIDTSAEQLAKLKTKGKPRSRMRRGRLRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDF--KERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQARVEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAE--RENEALRRRHREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKS-WTTPIIQ-----FLPWLFERVAAEVDKSFSASEVVESLFDEAKERAAAALADRVESTLRELEAAEKAARTARDRVIDLF-VPAELVGGEVGQRFGPISVRAGETVRAVEQRVIGWLEADGRVEEVTAPEGGFL 1251
            NI +DPR+ARGS +A  N I    +      T   P   +++  +  P +   T  P        +D +  L++    +  L +Q  T TD F   ++ + P ++ KKTG+D ST++     LF+++ E+QPLL+VLV KTL QAR EVERE EL  I+   + L   +  EA  +AKL EAA+ A+  +E E   R  R A       ++KVA+L++  ++L   + +A  +L +   +  P+ +     F+ W++ +  A VD       +++ L + +  +       R+ +TL  L            R +DL+ VPA           GPI+     T   +E  +  WL+ +    E+  P+GG+L
Sbjct:   33 NIMNDPRVARGSVYAAANSIHLKRDAAPPAPTAPPPTVPVKKNSIYEPPTSLSTYIP--------VDLTAFLVEQTPTIESLDVQ--TQTDAFLPNDKHKKP-FVLKKTGIDASTEILEEDGLFNFDAEVQPLLNVLVNKTLQQARAEVERETELHHISLYLSDLHVKKRVEADGVAKLVEAAVAAQEAKERETTERAQRLAEMD--ILQQKVAALKVGHRLLDDAIANADAQLRKNGVFYDPLKRLVETGFMKWMYTQADAAVDAHLVTHALLDDLLEYSLHK------QRILATLARLPTTGDGCLLLDARHVDLWNVPA----------VGPIAYSPRHTFAVIEAHIEAWLQGNESTAELPRPDGGYL 375          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig883.20219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP98_ECTSI1.740e-12050.72Flagellar radial spoke protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KBC6_9PHAE1.730e-8145.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQI5_9STRA3.030e-3531.41Radial spoke protein 3-domain-containing protein n... [more]
F0Y5T0_AURAN4.380e-2533.45Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
D7G937_ECTSI5.320e-2530.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00148F8BE78.420e-2532.27radial spoke head protein 3 homolog n=1 Tax=Notola... [more]
UPI001FAC462E3.940e-2430.47radial spoke head protein 3 homolog isoform X1 n=2... [more]
UPI00147159716.670e-2429.51radial spoke head protein 3 homolog n=1 Tax=Thalas... [more]
UPI001A98002C7.660e-2429.33radial spoke head protein 3 homolog n=2 Tax=Percom... [more]
A0A067CH65_SAPPC1.090e-2329.03Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig883contigF-serratus_M_contig883:212312..217241 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.5
Seed ortholog evalue2.9e-100
Seed eggNOG ortholog2880.D7FP98
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Radial spoke protein 3
EggNOG OGs2BDNM@1,2S132@2759
Ec32 ortholog descriptionRadial spoke 3
Ec32 orthologEc-08_000250.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1385
Cds size1383
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig883.20219.1prot_F-serratus_M_contig883.20219.1Fucus serratus malepolypeptideF-serratus_M_contig883 212312..217241 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932573.7335644-CDS-F-serratus_M_contig883:212311..2125521622932573.7335644-CDS-F-serratus_M_contig883:212311..212552Fucus serratus maleCDSF-serratus_M_contig883 212312..212552 +
1690964372.8195171-CDS-F-serratus_M_contig883:212311..2125521690964372.8195171-CDS-F-serratus_M_contig883:212311..212552Fucus serratus maleCDSF-serratus_M_contig883 212312..212552 +
1622932573.7489276-CDS-F-serratus_M_contig883:213103..2132391622932573.7489276-CDS-F-serratus_M_contig883:213103..213239Fucus serratus maleCDSF-serratus_M_contig883 213104..213239 +
1690964372.833734-CDS-F-serratus_M_contig883:213103..2132391690964372.833734-CDS-F-serratus_M_contig883:213103..213239Fucus serratus maleCDSF-serratus_M_contig883 213104..213239 +
1622932573.7672758-CDS-F-serratus_M_contig883:214970..2151751622932573.7672758-CDS-F-serratus_M_contig883:214970..215175Fucus serratus maleCDSF-serratus_M_contig883 214971..215175 +
1690964372.843422-CDS-F-serratus_M_contig883:214970..2151751690964372.843422-CDS-F-serratus_M_contig883:214970..215175Fucus serratus maleCDSF-serratus_M_contig883 214971..215175 +
1622932573.7840955-CDS-F-serratus_M_contig883:215546..2158491622932573.7840955-CDS-F-serratus_M_contig883:215546..215849Fucus serratus maleCDSF-serratus_M_contig883 215547..215849 +
1690964372.853882-CDS-F-serratus_M_contig883:215546..2158491690964372.853882-CDS-F-serratus_M_contig883:215546..215849Fucus serratus maleCDSF-serratus_M_contig883 215547..215849 +
1622932573.8046987-CDS-F-serratus_M_contig883:216743..2172411622932573.8046987-CDS-F-serratus_M_contig883:216743..217241Fucus serratus maleCDSF-serratus_M_contig883 216744..217241 +
1690964372.8707569-CDS-F-serratus_M_contig883:216743..2172411690964372.8707569-CDS-F-serratus_M_contig883:216743..217241Fucus serratus maleCDSF-serratus_M_contig883 216744..217241 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig883.20219.1

>prot_F-serratus_M_contig883.20219.1 ID=prot_F-serratus_M_contig883.20219.1|Name=mRNA_F-serratus_M_contig883.20219.1|organism=Fucus serratus male|type=polypeptide|length=461bp
SPDSFLHQLQVVLLKRRYILYNMMKPRPTAKTFGPESDAFRSDIQHQQDP
LDPLGPVNIHHDPRIARGSTFAGNRIDTSAEQLAKLKTKGKPRSRMRRGR
LRGPSSLFETAAPSQRSLREELDFSRHLIDPRDAVVRLQLQAGTHTDDFK
ERPQTPDYIPKKTGVDISTQLGALGKLFDWNREIQPLLDVLVGKTLDQAR
VEVEREHELECIAREAATLKRHREDEASRIAKLDEAALLAERENEALRRR
HREAARQRRSTKEKVASLQLVRQVLPLTLESAFEELERKSWTTPIIQFLP
WLFERVAAEVDKSFSASEVVESLFDEAKERAAAALADRVESTLRELEAAE
KAARTARDRVIDLFVPAELVGGEVGQRFGPISVRAGETVRAVEQRVIGWL
EADGRVEEVTAPEGGFLAGYLREARKRSRGIRLAKASLLMELQEVMGVSN
DVLLQAAFDD*
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mRNA from alignment at F-serratus_M_contig883:212312..217241+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig883.20219.1 ID=mRNA_F-serratus_M_contig883.20219.1|Name=mRNA_F-serratus_M_contig883.20219.1|organism=Fucus serratus male|type=mRNA|length=4930bp|location=Sequence derived from alignment at F-serratus_M_contig883:212312..217241+ (Fucus serratus male)
TCGCCCGACTCATTCCTCCACCAGTTGCAAGTAGTCCTGCTAAAAAGAAG ATACATACTGTACAACATGATGAAGCCTCGACCAACAGCAAAAACGTTTG GACCGGAGTCGGATGCTTTTAGAAGCGATATCCAACACCAGCAGGACCCG CTCGACCCGCTCGGTCCTGTTAACATCCACCACGACCCACGGATAGCACG AGGGAGCACGTTTGCGGGCAACAGGATCGATACGTCGGCAGGTATTCGCT CTGTTCCTGAGCGGACACGTTTTTTGTTTCCTACTGGAGGTACTTCGAGC AAATCACTTACCGGTACGTACTATTATATACCAGTATGGTACAGTCCCAA GGGTTGATCGAAAGGGGGGACCCAATCACCCTTTAACACTGTTGTGCCTG ATTCAGCATTGCCTAAGAAAGGTCTTCATACAAATAATAGGTTGCTGCTC TCGTGATACAGCTGTCGCTTCAGCATCACGGGCTGCCTATGCTATACAGA GTATAACAGCAACCCAGGGTGGTCACACGTGTGGTCGTAGTACAGGATAC TTCGATCAAAACGATTATTATCTATAGTAGCAAAGATTGAACTTCTCCCT GCAACAACGTATCGATGTTCTCCGAAGGTGATATCTATTGCATAAGAGAG GATTTGCAGCCGCTTTCTTGGCGCCTTGGAGAGGCTCACAGTTTCTTAAA TTGTGTTATTAGTCTGTCTATATCCCCGCCGTTGTTAAGGCTGATAAGGC CTACGGTACCGCATTTGTTTTGTCTCTCATCGTGAAACACAGAACAACTG GCGAAGCTGAAGACGAAAGGCAAGCCAAGGAGTCGTATGAGACGTGGCCG CCTGCGAGGCCCTTCTTCGCTCTTCGAGACGGCAGCACCCAGTCAGCGTT CCCTACGGGAGGAGCTCGACTTCTCTAGGTACAGTACTACAAGCAGTAGT AGTATTATAGTATGTACCTCTCTTGATATGTACAGGAAATCGCTTTATTA CGAGTAGTGATGAGTCCGCTTCTTATGGTCGGGTAAATTACGACATTTAT GCCGATAATATTTGACCGCTCTGTCAGACGTCGATACTTTCAACATGCCC ACTTCGTACTAATAATAGTGGATGTGGGAAAGAGAGGCACACATTAATGA TCCATGGTGATGCAAAGGCAGCACTTGTTTCCGGAACTACATTGCGAGGT TTACTGGCCCCGTGCCGGCGGACTCTCGGCAGTGAACGCCGTCGGTACGC AATAGCGTGACCCGATAAACTCGGGACTGACCCGATGGTGTATGGCGGTT TAAATAATACATAAATGGTCGCTGCCGATGAAATCGGGAGGAATCCCATA AGGAAGCACCAGATTCAGTCCGTGTGTGGAGATGGGCAGGCTGACACGGG ACGGGATTACCGGAACCGTCTCGCGAGACCAAATTCTCCGGCGCGAACGG AGACAGGAAAATACTAAATATTCATTTTCCTTGTTCAGCTGACCACGACG AGTAGGATTGGTAACCTTAGACGGCAAAACCCAGCCAGCAATCCCTAAGA GAGGAGCTCGACTTCTCTAGGTACTACAAGCAGTAGCACTATGTACCGCC GGCTCTTGATACGTACAGGAAATCGCTTTATTACGAGTAGTTATGAGCCC GCTTCTTGTGGACGGGTACATGACGTGATATGCCGATAATTTTTGACTGC CCGGTCAGACGTTGATACTTTCAACATGCCCACTTCATACCAATAATAGT GGGGGAAAGAGAAGCGCACATTAGTGGTTCATGGTGATGCAAAGACATCA CCCGTTTCTGGAACCACCTTGAGGTTTACTGGGCCTAATCTGGTGGACTC TGGGCAGTGAACGCCGTCTGTACGCAATAGCGTGACCCGATAAACTCGGG ACTGACCCGATGACGTATGGCGGAAATAAATGGACGTCGCCGCGGAAATC GGGAGGAATTTCATAAGTAAGCACCAGATTCAGTCCTTGTGTGGAGGCGG GCAGGCTGACGCGGGACGGAACTGCCGAAACCATCTCGCGAGACCAAATT CTCAGGCGCGAACGGGGACAGAGAAATATGAAATATTCATCTTCCTTGTT GAGACCACGACGAGCAGGATTGGGAACCTTACCCGGTTGATCGTACTTAC TATTCTTGCTATATGTGATGACCATACATACATGCCAGGGTGCCTGTTAA GCTCCGAGGGAAATAAAATGCATAGACTAGAAGCCGATCATTCATAGTTT TATTTCCGGTTTAGGAATCCTTGGGCTAGGATTCTGTAAGGAGCCGGATG AAACTCTTTAAAATTACTTACCTGAATCCGCCCGCCCTTCCCACAGCATT ATTTATGATTCGGTCAATGTTCGAACGTACCTCGCTGGGTTCGGACTTCA CGTCGATCAGCGCAACGCAGTGGCACAGACGCGACGACTTTACAGCTGTG AAGTCGAACTTTTCACGAGAACAAGCTATCTGGCGACTGCTTTTTTTGTA GCTCAACGAAAAAGCGATTTTTTCCCCCTGACTGGGGGATGCTCAGAAGG TCCAGGTGCGTTCTGTATTTTCTTCAAAAAAGGGACCATCATCGTTCAAG CCCGACCCAACGGTCATGTCGATCATGATGAGAAGATTTTTCGCGTCGAC ATGATGCAGGCACCTCATCGACCCTCGAGACGCAGTTGTCCGACTCCAGC TTCAGGCGGGCACGCACACTGACGACTTCAAGGAACGACCGCAAACCCCT GATTACATTCCCAAGAAAACGGGGGTGGATATATCCACCCAGTTAGGAGC GTTGGGAAAGCTGTTCGATTGGAACAGAGAGATTCAGCCATTGTTAGATG TTCTGGTCGGAAAGGTCCGTTCACAATTGTTATTATTGTAGCTGAAATCG TAGACCTTTTTTGCCCACGGCATAACACTTTAACGTTTTCCCCCCGAGCT CTCTTTCAAGTAGCAAAAAAAAAAAGCTGCTGAGTGCCATACACACACAC ACACTGTGAACGCAGTAGGATTTCAAATGACAACTCGCACGCGTCATCTG TGCCTGGATACTAATATTGAAAGTAGGATCCTCGGTAGTTATTACTTGAG CCACGGAACGGCTTGTTAGGTACAGTACTTAGATATATACTCAGCAGGCA ACATCATCCCATTAGGTACTTACACACACATCAGACAATATCCCATGTTT TCTCTCAACGCATCTCGGCGATAAAACGTACGTAGACCCTTGATCAGGCA AGAGTAGAAGTGGAGCGTGAGCACGAGCTCGAGTGCATTGCACGGGAGGC CGCCACGCTGAAACGTCACCGCGAGGATGAGGCATCAAGAATTGCGAAGC TCGATGAAGCGGCGTTGTTAGCCGAGCGCGAGAACGAGGCACTGCGACGG CGACACAGAGAAGCGGCGAGACAGAGGCGCTCGACGAAGGAAAAGGTCGC CTCCTTGCAGCTCGTGCGGCAAGTGCTGCCACTCACACTCGAAAGCGCCT TCGAGGAACTGGAGAGAAAATCGTGGACCACACCGATAGTGTACCAGGCA AGGGATCGAGAAATCTTAAGACCAATAGACGCTGCTCCGAGAAGTTTCGC TCACGTAAAGTTGTGAATTTGAGAGGCCTGATTTGATTGTGTGAGCCCGT GCGTCCTACTCTAGAGTCAATATGTTTATCCAGGACCGCTGTGCTGGTAC TCTGCCTCTAGCTTTATAGAATCGCTTGTGTTCGGATGTTCCAGCTGCCG CCCGACGTGTGCTTCATTTTGGAAGTTGGTTCATGCCCCCCCCCCCCGAT ATTTTCAAACATCAAAACGCCTGGAAGTATCGAGTCTACGACAGGTGTTT GCAGACAGTCCGGGCGCGGCCATAAATATAATTAAACACAATGTTAATAT TAATTGGAGTACATGTTTGGACCCTGTCTGGTGAAAATCCATGTTGATGG CACCAGCCTCGCGTAGACCTGGGCATGAACGCTCCGTAAAACTACGGTTT TAGCATGGACCTCTTCAGATTTCTCTTGAAGCTCCAATTCTAATTCGATA CTTAATGCAACAACTCGACGCGTCTAGCCCCACTCTGCCGTAGCAGGTAT CCAGCACAGAGGGCTGTTGTGTTCGCGTGTATTAAGGTCTCAATATCGAT TTGATTTCTCGGGTAGAGCTCTGACTATATTATAGTTTCGGTCAAGATCT CTCATTCACCTATGCTTCAACCAGGCCTCCAACGAGACCACTCGTTAGTT GATCGATCAAATCTTTAGGTTTCGAGCGAGCAGCCGTACCACAACGTTCT TACCGCGCGGCCAACGGTCACCGTCGTGGTCAGGCCAGTCGCGATTTCAC GCACACCACCGCATTCCTATCGCATGCTTCACCAACACCGTCTGAACTGA CGTGACCCTTATCTTCCTTCCTTCAGATGAAGATCCAGTTTTTACCCTGG CTCTTCGAACGTGTGGCTGCGGAAGTCGACAAGAGTTTTTCAGCGAGCGA AGTCGTGGAAAGCCTGTTCGACGAGGCCAAGGAGAGGGCCGCGGCAGCAT TAGCAGATCGCGTCGAGTCAACCCTGCGGGAGCTGGAGGCAGCAGAGAAG GCAGCTCGTACCGCACGCGATCGCGTCATCGATCTTTTTGTCCCGGCGGA GTTGGTTGGTGGAGAAGTAGGTCAGCGATTTGGCCCAATTTCTGTACGGG CCGGAGAAACGGTCAGAGCTGTAGAGCAGAGGGTGATTGGATGGCTAGAG GCGGACGGTAGGGTCGAAGAGGTCACGGCGCCGGAAGGAGGTTTCCTCGC CGGCTACCTTCGAGAAGCGAGAAAACGAAGTCGCGGCATCCGATTGGCGA AGGCATCCTTGCTGATGGAGCTCCAAGAAGTGATGGGGGTTTCTAATGAT GTTCTGCTTCAGGCAGCCTTCGATGATTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig883:212312..217241+

>mRNA_F-serratus_M_contig883.20219.1 ID=mRNA_F-serratus_M_contig883.20219.1|Name=mRNA_F-serratus_M_contig883.20219.1|organism=Fucus serratus male|type=CDS|length=2766bp|location=Sequence derived from alignment at F-serratus_M_contig883:212312..217241+ (Fucus serratus male)
TCGCCCGACTCATTCCTCCACCAGTTGCAAGTAGTCCTGCTAAAAAGAAG
ATACATACTGTACAACATGATGAAGCCTCGACCAACAGCAAAAACGTTTG
GACCGGAGTCGGATGCTTTTAGAAGCGATATCCAACACCAGCAGGACCCG
CTCGACCCGCTCGGTCCTGTTAACATCCACCACGACCCACGGATAGCACG
AGGGAGCACGTTTGCGGGCAACAGGATCGATACGTCGGCAGTCGCCCGAC
TCATTCCTCCACCAGTTGCAAGTAGTCCTGCTAAAAAGAAGATACATACT
GTACAACATGATGAAGCCTCGACCAACAGCAAAAACGTTTGGACCGGAGT
CGGATGCTTTTAGAAGCGATATCCAACACCAGCAGGACCCGCTCGACCCG
CTCGGTCCTGTTAACATCCACCACGACCCACGGATAGCACGAGGGAGCAC
GTTTGCGGGCAACAGGATCGATACGTCGGCAGAACAACTGGCGAAGCTGA
AGACGAAAGGCAAGCCAAGGAGTCGTATGAGACGTGGCCGCCTGCGAGGC
CCTTCTTCGCTCTTCGAGACGGCAGCACCCAGTCAGCGTTCCCTACGGGA
GGAGCTCGACTTCTCTAGAACAACTGGCGAAGCTGAAGACGAAAGGCAAG
CCAAGGAGTCGTATGAGACGTGGCCGCCTGCGAGGCCCTTCTTCGCTCTT
CGAGACGGCAGCACCCAGTCAGCGTTCCCTACGGGAGGAGCTCGACTTCT
CTAGGCACCTCATCGACCCTCGAGACGCAGTTGTCCGACTCCAGCTTCAG
GCGGGCACGCACACTGACGACTTCAAGGAACGACCGCAAACCCCTGATTA
CATTCCCAAGAAAACGGGGGTGGATATATCCACCCAGTTAGGAGCGTTGG
GAAAGCTGTTCGATTGGAACAGAGAGATTCAGCCATTGTTAGATGTTCTG
GTCGGAAAGGCACCTCATCGACCCTCGAGACGCAGTTGTCCGACTCCAGC
TTCAGGCGGGCACGCACACTGACGACTTCAAGGAACGACCGCAAACCCCT
GATTACATTCCCAAGAAAACGGGGGTGGATATATCCACCCAGTTAGGAGC
GTTGGGAAAGCTGTTCGATTGGAACAGAGAGATTCAGCCATTGTTAGATG
TTCTGGTCGGAAAGACCCTTGATCAGGCAAGAGTAGAAGTGGAGCGTGAG
CACGAGCTCGAGTGCATTGCACGGGAGGCCGCCACGCTGAAACGTCACCG
CGAGGATGAGGCATCAAGAATTGCGAAGCTCGATGAAGCGGCGTTGTTAG
CCGAGCGCGAGAACGAGGCACTGCGACGGCGACACAGAGAAGCGGCGAGA
CAGAGGCGCTCGACGAAGGAAAAGGTCGCCTCCTTGCAGCTCGTGCGGCA
AGTGCTGCCACTCACACTCGAAAGCGCCTTCGAGGAACTGGAGAGAAAAT
CGTGGACCACACCGATAACCCTTGATCAGGCAAGAGTAGAAGTGGAGCGT
GAGCACGAGCTCGAGTGCATTGCACGGGAGGCCGCCACGCTGAAACGTCA
CCGCGAGGATGAGGCATCAAGAATTGCGAAGCTCGATGAAGCGGCGTTGT
TAGCCGAGCGCGAGAACGAGGCACTGCGACGGCGACACAGAGAAGCGGCG
AGACAGAGGCGCTCGACGAAGGAAAAGGTCGCCTCCTTGCAGCTCGTGCG
GCAAGTGCTGCCACTCACACTCGAAAGCGCCTTCGAGGAACTGGAGAGAA
AATCGTGGACCACACCGATAATCCAGTTTTTACCCTGGCTCTTCGAACGT
GTGGCTGCGGAAGTCGACAAGAGTTTTTCAGCGAGCGAAGTCGTGGAAAG
CCTGTTCGACGAGGCCAAGGAGAGGGCCGCGGCAGCATTAGCAGATCGCG
TCGAGTCAACCCTGCGGGAGCTGGAGGCAGCAGAGAAGGCAGCTCGTACC
GCACGCGATCGCGTCATCGATCTTTTTGTCCCGGCGGAGTTGGTTGGTGG
AGAAGTAGGTCAGCGATTTGGCCCAATTTCTGTACGGGCCGGAGAAACGG
TCAGAGCTGTAGAGCAGAGGGTGATTGGATGGCTAGAGGCGGACGGTAGG
GTCGAAGAGGTCACGGCGCCGGAAGGAGGTTTCCTCGCCGGCTACCTTCG
AGAAGCGAGAAAACGAAGTCGCGGCATCCGATTGGCGAAGGCATCCTTGC
TGATGGAGCTCCAAGAAGTGATGGGGGTTTCTAATGATGTTCTGCTTCAG
GCAGCCTTCGATGATTAGATCCAGTTTTTACCCTGGCTCTTCGAACGTGT
GGCTGCGGAAGTCGACAAGAGTTTTTCAGCGAGCGAAGTCGTGGAAAGCC
TGTTCGACGAGGCCAAGGAGAGGGCCGCGGCAGCATTAGCAGATCGCGTC
GAGTCAACCCTGCGGGAGCTGGAGGCAGCAGAGAAGGCAGCTCGTACCGC
ACGCGATCGCGTCATCGATCTTTTTGTCCCGGCGGAGTTGGTTGGTGGAG
AAGTAGGTCAGCGATTTGGCCCAATTTCTGTACGGGCCGGAGAAACGGTC
AGAGCTGTAGAGCAGAGGGTGATTGGATGGCTAGAGGCGGACGGTAGGGT
CGAAGAGGTCACGGCGCCGGAAGGAGGTTTCCTCGCCGGCTACCTTCGAG
AAGCGAGAAAACGAAGTCGCGGCATCCGATTGGCGAAGGCATCCTTGCTG
ATGGAGCTCCAAGAAGTGATGGGGGTTTCTAATGATGTTCTGCTTCAGGC
AGCCTTCGATGATTAG
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