prot_F-serratus_M_contig883.20214.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig883.20214.1
Unique Nameprot_F-serratus_M_contig883.20214.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length126
Homology
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BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A343C617_FUCDI (Ribosomal protein S12 n=3 Tax=Fucus TaxID=3011 RepID=A0A343C617_FUCDI)

HSP 1 Score: 245 bits (625), Expect = 4.890e-82
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKKG 124
            MSRPNISQWVKRC GKKITKIKSVGLKGCPQKKGVCLR+FICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKKG
Sbjct:    1 MSRPNISQWVKRCQGKKITKIKSVGLKGCPQKKGVCLRIFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKKG 124
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BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A1L2F1H2_9PHAE (Ribosomal protein S12 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H2_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 5.920e-74
Identity = 108/123 (87.80%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPNI+QWVK+C G KITK +SVGL+GCPQKKGVCL+VF+CSPKKPNSARRKVVKVRL+N+IRLTAYIPGQ+HRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDL+GL GRKT RSKYGTKK
Sbjct:    1 MSRPNITQWVKKCQGNKITKKRSVGLRGCPQKKGVCLKVFVCSPKKPNSARRKVVKVRLANRIRLTAYIPGQIHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLEGLGGRKTARSKYGTKK 123
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BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A8F0FDA5_9PHAE (Ribosomal protein S12 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FDA5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 6.470e-73
Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKKG 124
            MSRPNI+QW+KRC  KK TK KSVGL+GCPQKKGVCL+VF+CSPKKPNSARRKVVKVRLSNK+RLTAYIPGQ HRLQEHSQVLVRGGRIPDLPGVKYRLVRNK DL+GL GRKT RSKYGTKKG
Sbjct:    1 MSRPNINQWLKRCQDKKRTKPKSVGLRGCPQKKGVCLKVFVCSPKKPNSARRKVVKVRLSNKVRLTAYIPGQTHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKLDLEGLLGRKTARSKYGTKKG 124
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BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A7U1G3H6_9PHAE (Ribosomal protein S12 n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A7U1G3H6_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.630e-71
Identity = 106/123 (86.18%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPNI+QW  +  GKK TK+KSVGL+GCPQK+GVCL+VFICSPKKPNSARRKVVKVRLSNK++LTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRL+RNK DL+GLSGRKT RSKYGTKK
Sbjct:    1 MSRPNINQWFNKSHGKKQTKVKSVGLRGCPQKRGVCLKVFICSPKKPNSARRKVVKVRLSNKVKLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLIRNKLDLEGLSGRKTSRSKYGTKK 123
[Close]
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A4D6E517_9PHAE (Ribosomal protein S12 n=10 Tax=Laminariales TaxID=2886 RepID=A0A4D6E517_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 7.750e-70
Identity = 102/123 (82.93%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPN +QW  +  GKK TK+KSVGL+GCPQK+G+CL+VF+CSPKKPNSARRKVVKVRLSNK++LTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRL+RNK DL+GL GRKT RSKYGTKK
Sbjct:    1 MSRPNTNQWFNKSQGKKQTKVKSVGLRGCPQKRGICLKVFVCSPKKPNSARRKVVKVRLSNKVKLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLIRNKLDLEGLPGRKTSRSKYGTKK 123
[Close]
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A8E8PDL4_9PHAE (Ribosomal protein S12 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PDL4_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 9.980e-70
Identity = 100/123 (81.30%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPN++QW  +C G++++K +SVGL+GCPQK+GVCL+VFICSP+KPNSARRKV+KVRLSNK+RLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYR +RNK DLDGL+GRKT RSKYGTKK
Sbjct:    1 MSRPNLNQWAYKCQGERLSKPRSVGLRGCPQKRGVCLKVFICSPRKPNSARRKVIKVRLSNKVRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRCIRNKLDLDGLAGRKTSRSKYGTKK 123
[Close]
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: D0IPT7_SACAN (Ribosomal protein S12 n=44 Tax=Phaeophyceae TaxID=2870 RepID=D0IPT7_SACAN)

HSP 1 Score: 214 bits (544), Expect = 1.100e-69
Identity = 103/123 (83.74%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPNI+QW  +  GKK T+ KSVGL+GCPQK+GVCL+VF+CSPKKPNSARRKVVKVRLSNK++LTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRL+RNK DL+GL GRKT RSKYGTKK
Sbjct:    1 MSRPNINQWFNKSQGKKQTRAKSVGLRGCPQKRGVCLKVFVCSPKKPNSARRKVVKVRLSNKVKLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLIRNKLDLEGLPGRKTSRSKYGTKK 123
[Close]
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A0U1Z5R7_9PHAE (Ribosomal protein S12 n=21 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1Z5R7_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 2.220e-69
Identity = 106/123 (86.18%), Postives = 112/123 (91.06%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPNI QW K+  G K  K KSVGL+GCPQKKGVCL+VF+CSPKKPNSARRKVVKVRLSNKIRLTAYIPGQ+HRLQEHSQVL+RGGRIPDLPGVKYRLVRNK DL GLSGRKT RSKYGTKK
Sbjct:    1 MSRPNIIQWFKKSNGTKKKKKKSVGLRGCPQKKGVCLKVFVCSPKKPNSARRKVVKVRLSNKIRLTAYIPGQIHRLQEHSQVLIRGGRIPDLPGVKYRLVRNKLDLGGLSGRKTARSKYGTKK 123
[Close]
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: Q2TUG4_9PHAE (Ribosomal protein S12 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUG4_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 4.060e-69
Identity = 105/123 (85.37%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRP I+QW KR  GKKI+++KSVGL+GCPQK+GVCL+VF+ SPKKPNSARRKVVK+RLSNK+RLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNK DL+GLSGRKT RSKYGTKK
Sbjct:    1 MSRPTINQWFKR-QGKKISRVKSVGLRGCPQKRGVCLKVFVSSPKKPNSARRKVVKIRLSNKVRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKLDLEGLSGRKTSRSKYGTKK 122
[Close]
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Match: A0A3G5FPN2_9PHAE (Ribosomal protein S12 n=4 Tax=Ectocarpales TaxID=2877 RepID=A0A3G5FPN2_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.220e-68
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 0 
Query:    1 MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSARRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLVRNKFDLDGLSGRKTGRSKYGTKK 123
            MSRPNI+QW K    K++TK KSVGLKGCPQK+GVCL+VF+CSPKKPNSARRKVVKVRLSNK++LTAYIPGQVHRLQEHSQVLVRGGR+PDLPGVKYRL+RNK DL+GL  RKT RSKYGTKK
Sbjct:    1 MSRPNINQWFKNKKTKRLTKSKSVGLKGCPQKRGVCLKVFVCSPKKPNSARRKVVKVRLSNKVKLTAYIPGQVHRLQEHSQVLVRGGRVPDLPGVKYRLIRNKLDLEGLPDRKTSRSKYGTKK 123
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig883.20214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A343C617_FUCDI4.890e-8298.39Ribosomal protein S12 n=3 Tax=Fucus TaxID=3011 Rep... [more]
A0A1L2F1H2_9PHAE5.920e-7487.80Ribosomal protein S12 n=1 Tax=Coccophora langsdorf... [more]
A0A8F0FDA5_9PHAE6.470e-7387.90Ribosomal protein S12 n=1 Tax=Analipus japonicus T... [more]
A0A7U1G3H6_9PHAE1.630e-7186.18Ribosomal protein S12 n=3 Tax=Phaeophyceae TaxID=2... [more]
A0A4D6E517_9PHAE7.750e-7082.93Ribosomal protein S12 n=10 Tax=Laminariales TaxID=... [more]
A0A8E8PDL4_9PHAE9.980e-7081.30Ribosomal protein S12 n=1 Tax=Phaeophyceae sp. Tax... [more]
D0IPT7_SACAN1.100e-6983.74Ribosomal protein S12 n=44 Tax=Phaeophyceae TaxID=... [more]
A0A0U1Z5R7_9PHAE2.220e-6986.18Ribosomal protein S12 n=21 Tax=Sargassaceae TaxID=... [more]
Q2TUG4_9PHAE4.060e-6985.37Ribosomal protein S12 n=2 Tax=Desmarestia TaxID=31... [more]
A0A3G5FPN2_9PHAE2.220e-6882.93Ribosomal protein S12 n=4 Tax=Ectocarpales TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PRINTSPR01034RIBOSOMALS12coord: 29..44
score: 56.6
coord: 112..124
score: 63.57
coord: 79..96
score: 74.38
coord: 96..112
score: 34.64
coord: 44..59
score: 79.69
coord: 60..79
score: 54.58
IPR006032Ribosomal protein S12/S23PIRSFPIRSF002133RPS12p_RPS12a_RPS23e_RPS12ocoord: 3..125
e-value: 1.6E-49
score: 164.5
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 17..123
e-value: 6.1E-33
score: 112.8
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 19..120
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 45..52
NoneNo IPR availableGENE3D2.40.50.140coord: 1..125
e-value: 3.2E-49
score: 167.9
NoneNo IPR availablePANTHERPTHR11652:SF128S RIBOSOMAL PROTEIN S12, MITOCHONDRIALcoord: 19..120
IPR005679Ribosomal protein S12, bacterial-typeTIGRFAMTIGR00981TIGR00981coord: 4..123
e-value: 5.6E-48
score: 159.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 5..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig883contigF-serratus_M_contig883:127476..127853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig883.20214.1mRNA_F-serratus_M_contig883.20214.1Fucus serratus malemRNAF-serratus_M_contig883 127476..127853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig883.20214.1 ID=prot_F-serratus_M_contig883.20214.1|Name=mRNA_F-serratus_M_contig883.20214.1|organism=Fucus serratus male|type=polypeptide|length=126bp
MSRPNISQWVKRCLGKKITKIKSVGLKGCPQKKGVCLRVFICSPKKPNSA
RRKVVKVRLSNKIRLTAYIPGQVHRLQEHSQVLVRGGRIPDLPGVKYRLV
RNKFDLDGLSGRKTGRSKYGTKKGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006032Ribosomal_S12/S23
IPR005679Ribosomal_S12_bac
IPR012340NA-bd_OB-fold