prot_F-serratus_M_contig883.20211.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig883.20211.1
Unique Nameprot_F-serratus_M_contig883.20211.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length149
Homology
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: D7FP92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP92_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 6.840e-97
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEKMENGGRQVTRVGQQDLDRIAGAVVRGDD 148
            MADYEPRGITVRDVA ADFIKAYAEHLKNTGRVELPSWCD+VKTAPHKEMCPYD DWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRG  TNTHKPA+TG+IRHVLQQLE LKVVEKMENGGR VTRVGQQDLDRIAGAVVRGDD
Sbjct:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPAATGIIRHVLQQLEALKVVEKMENGGRTVTRVGQQDLDRIAGAVVRGDD 148          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A835ZNM6_9STRA (Ribosomal protein S19e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNM6_9STRA)

HSP 1 Score: 231 bits (589), Expect = 7.460e-76
Identity = 112/148 (75.68%), Postives = 126/148 (85.14%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEKMENGGRQVTRVGQQDLDRIAGAVVRGDD 148
            MA YEP+G++VRDVAPA FIKAYA+HLKNTGR ELP W D+VKT   KE+ PYDPDWYY+RAAAVARKVYLRPGRGVGGL+KAFG+  RRG RTN H  AS G+IRH+LQQLE + VVEK E GGR+VTR GQQDLDRIAGAV RGD+
Sbjct:    1 MATYEPQGVSVRDVAPAKFIKAYADHLKNTGRFELPPWVDLVKTGTQKELAPYDPDWYYVRAAAVARKVYLRPGRGVGGLTKAFGSVERRGTRTNHHARASGGLIRHILQQLETMSVVEKTETGGRKVTREGQQDLDRIAGAVSRGDE 148          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A8J2WX61_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX61_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.340e-61
Identity = 97/146 (66.44%), Postives = 116/146 (79.45%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEKMENGGRQVTRVGQQDLDRIAGAVVRG 146
            M +YE RGITVRDVAPA FI+AYA HLKN+ R E+P W D+VKT  HKE+ P D DWY++RAA++ARKVYL+PG GVG L K +G + RRGAR  T + A+ G+IR VLQQLEE KVVEK  +GGR++TRVGQQDLDRIAG V RG
Sbjct:    1 MVEYEARGITVRDVAPAVFIEAYALHLKNSDRFEIPKWTDLVKTGVHKELGPTDDDWYFVRAASIARKVYLKPGVGVGALRKWYGGQYRRGARAKTFQRAAGGLIRSVLQQLEETKVVEKTASGGRRITRVGQQDLDRIAGQVARG 146          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A5D6XW04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW04_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.370e-59
Identity = 97/152 (63.82%), Postives = 117/152 (76.97%), Query Frame = 0
Query:    1 MADYE--PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEK----MENGGRQVTRVGQQDLDRIAGAVVRG 146
            MA+Y+  PRG+TVRDV  ADFIKAYAEHLK +G++ELPSW D+VKTA  KE  P DPDWY++RAA++ARKVYLR   GVG L K +G  ARRG R    + AS G+IRH+LQQLEE+KVV+K    +  GGR++T  GQQDLDRIAG VVRG
Sbjct:    1 MAEYDETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPTDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVRHQRFQKASGGLIRHILQQLEEMKVVDKCPEGVNKGGRKITSHGQQDLDRIAGQVVRG 152          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: K3WSU7_GLOUD (Uncharacterized protein n=2 Tax=Oomycota TaxID=4762 RepID=K3WSU7_GLOUD)

HSP 1 Score: 187 bits (475), Expect = 1.940e-58
Identity = 97/151 (64.24%), Postives = 115/151 (76.16%), Query Frame = 0
Query:    1 MADYE--PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEK----MENGGRQVTRVGQQDLDRIAGAVVR 145
            MA+YE  PRG+TVRDV  ADFIKAYAEHLK +G++ELPSW D+VKTA  KE  P DPDWY++RAA++ARKVYLR   GVG L K +G  ARRG      + AS G+IRH+LQQLEE+KVVEK    +  GGR++T  GQQDLDRIAG VVR
Sbjct:    1 MAEYEETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPNDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVHRQHFQQASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRIAGQVVR 151          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A0P5ZW38_9CRUS (40S ribosomal protein S19 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0P5ZW38_9CRUS)

HSP 1 Score: 187 bits (474), Expect = 2.670e-58
Identity = 95/149 (63.76%), Postives = 115/149 (77.18%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEKMENG----GRQVTRVGQQDLDRIAGAVV 144
            MA+Y+ PRG+TVRDV PADFIKAYAEHLK +G++ELPSW D+VKTA  KE  P DPDWYY+RAA++ARKVYL+   G+G L KA+G  ARRG      + AS G+IRH+LQQLEE+KVVEK E G    GR+++  GQQDLDRIAG V 
Sbjct:    1 MAEYDAPRGVTVRDVKPADFIKAYAEHLKRSGKMELPSWWDVVKTASFKEFSPADPDWYYVRAASIARKVYLKQYTGIGALKKAYGGAARRGVHRQHFQEASGGLIRHILQQLEEMKVVEKCEEGVKKGGRRISSHGQQDLDRIAGQVA 149          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A0W8BY81_PHYNI (40S ribosomal protein S19-1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BY81_PHYNI)

HSP 1 Score: 186 bits (473), Expect = 4.180e-58
Identity = 97/153 (63.40%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 MADYEP----RGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEK----MENGGRQVTRVGQQDLDRIAGAVVR 145
            MADY+     RG+TVRDV PADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P DPDWYYIRAA++ARKVYLR   GVG L K +G  AR+G      + AS G+IRH+LQQLEE+KVVEK    +  GGR++T  GQQDLDRIAG VVR
Sbjct:    1 MADYDEEEVVRGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRIAGQVVR 153          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: H3G8P8_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3G8P8_PHYRM)

HSP 1 Score: 185 bits (470), Expect = 1.200e-57
Identity = 96/153 (62.75%), Postives = 116/153 (75.82%), Query Frame = 0
Query:    1 MADYEP----RGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEK----MENGGRQVTRVGQQDLDRIAGAVVR 145
            MADY+     RG+TVRDV PADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P DPDWYYIRAA++ARKVYLR   GVG L K +G  +RRG +    + AS G+IRH+LQQLEE+KVVEK    +  GGR+++  GQQDLDRIAG VVR
Sbjct:    1 MADYDEEEVTRGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTAAFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGASRRGVQRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKISSHGQQDLDRIAGQVVR 153          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A6A3J4U8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3J4U8_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.020e-57
Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 MADYEP----RGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEK----MENGGRQVTRVGQQDLDRIAGAVVR 145
            MADY+     RG+TVRDV PADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P DPDWYYIRAA++ARKVYLR   GVG L K +G  AR+G      + AS G+IRH+LQQLEE+KVVEK    +  GGR+++  GQQDLDRIAG VVR
Sbjct:   28 MADYDEEEVTRGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPSDPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQQASGGLIRHILQQLEEMKVVEKCAEGVNKGGRKISSHGQQDLDRIAGQVVR 180          
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Match: A0A7S3L966_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L966_9STRA)

HSP 1 Score: 183 bits (464), Expect = 9.170e-57
Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 0
Query:    5 EPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPASTGVIRHVLQQLEELKVVEKMENGGRQVTRVGQQDLDRIAGAVVR 145
            E RGI VRDV+   FIKAYAEHLKN+ + +LP W D +KT+   E+ PY  DWYYIRAA++ARKVYLRPG G+G L K +G   RRGART   + A++GVIR VL QLEE+KVVEK+E+GGR+VT VGQQDLDRIAG+V+R
Sbjct:    4 EARGICVRDVSAVSFIKAYAEHLKNSDKFDLPVWADTIKTSVVNELAPYGDDWYYIRAASIARKVYLRPGIGIGQLQKWYGGAYRRGARTEHFRKAASGVIRSVLLQLEEMKVVEKLESGGRRVTTVGQQDLDRIAGSVIR 144          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig883.20211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP92_ECTSI6.840e-9793.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZNM6_9STRA7.460e-7675.68Ribosomal protein S19e n=1 Tax=Tribonema minus Tax... [more]
A0A8J2WX61_9STRA2.340e-6166.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5D6XW04_9STRA3.370e-5963.82Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WSU7_GLOUD1.940e-5864.24Uncharacterized protein n=2 Tax=Oomycota TaxID=476... [more]
A0A0P5ZW38_9CRUS2.670e-5863.7640S ribosomal protein S19 n=3 Tax=Eukaryota TaxID=... [more]
A0A0W8BY81_PHYNI4.180e-5863.4040S ribosomal protein S19-1 n=3 Tax=Phytophthora T... [more]
H3G8P8_PHYRM1.200e-5762.75Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]
A0A6A3J4U8_9STRA4.020e-5762.75Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A7S3L966_9STRA9.170e-5764.54Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 10..146
e-value: 1.6E-74
score: 263.5
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 10..144
e-value: 7.2E-54
score: 181.2
IPR001266Ribosomal protein S19ePANTHERPTHR1171040S RIBOSOMAL PROTEIN S19coord: 8..143
IPR038111Ribosomal protein S19e domain superfamilyGENE3D1.10.10.2700coord: 2..146
e-value: 4.1E-57
score: 194.2
NoneNo IPR availablePANTHERPTHR11710:SF1440S RIBOSOMAL PROTEIN S19-1-RELATEDcoord: 8..143
NoneNo IPR availablePRODOMPD003854coord: 8..119
e-value: 3.0E-34
score: 359.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 9..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig883contigF-serratus_M_contig883:113143..119848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig883.20211.1mRNA_F-serratus_M_contig883.20211.1Fucus serratus malemRNAF-serratus_M_contig883 113143..119848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig883.20211.1 ID=prot_F-serratus_M_contig883.20211.1|Name=mRNA_F-serratus_M_contig883.20211.1|organism=Fucus serratus male|type=polypeptide|length=149bp
MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEM
CPYDPDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGARTNTHKPA
STGVIRHVLQQLEELKVVEKMENGGRQVTRVGQQDLDRIAGAVVRGDD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001266Ribosomal_S19e
IPR038111Ribosomal_S19e_sf
IPR036390WH_DNA-bd_sf