mRNA_F-serratus_M_contig882.20199.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: D7G2R6_ECTSI (Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R6_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 3.580e-146 Identity = 232/367 (63.22%), Postives = 268/367 (73.02%), Query Frame = 2
Query: 98 MVPRHPLCLVYVAILALELRSVSARPLTRLVAARSPPRDDKYDSAAIARGRISGVGERPTAFQLGRRRKTFPGEKLRVYRGAWGLKTVVKHVRDLRGGAVPSDDSDENFDSLSEEDDDDLELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYLRAEYARAGKEYGQDTPLDDDED 1198
MV RHP CL V +LAL L + R RL+A S + + + +R A +LG R++F +GAWGL TV LRGGA DD D DFGEA+F RLKQDW KTP++TR +FQVS+ I + A N+NQWP+FLLLDWRP + KLQLWRL TPFL LGPLG+NF LT HF+WTYMS LEKLHYREPHTFVMLL FGMSSL+LLTL+TGGDVN+SYTLGHS++CF+V +WSRKFAGT+VN+LDMFELPTELLPYFFVAQTLMMEGVIPWVDLSG+LIGYAWQT SLKGLL+APKPLVNLFRNNA+LRAEYA+AGKEYGQD PL DD+D
Sbjct: 1 MVLRHPACLGSVVLLALGLTPTAGRVSPRLLALGSSFSGRHENGKQRQQPEQESLQQRAAALRLGGDRQSFLAHSGNGRKGAWGL-TVAS---GLRGGA---DDEDXXXXXXX------XXXXXXXDFGEASFVDRLKQDWKKTPVITRAYFQVSVAITLAAAALNENQWPTFLLLDWRPAIFKLQLWRLFTPFLNLGPLGLNFALTAHFAWTYMSHLEKLHYREPHTFVMLLAFGMSSLLLLTLVTGGDVNSSYTLGHSMNCFLVMIWSRKFAGTRVNMLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGILIGYAWQTLSLKGLLKAPKPLVNLFRNNAFLRAEYAKAGKEYGQDVPLHDDDD 354
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: A0A7S2Y3M2_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3M2_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.900e-56 Identity = 98/235 (41.70%), Postives = 152/235 (64.68%), Query Frame = 2
Query: 464 VDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYLRAEYARAGKEYG 1168
+DE DF + R+K W KTP +++ + S+ I + F NQWP LL+DW L KLQ+WRL+T FL+ G G++++LT HF WTY+ QLEKLH+R+P F ++L FGM+ L + L+ ++ + LGH+LSCF+V +W++K+ G VNV+D+F + ELLP+FFVAQTL++ G +P D+ G+ G+ + +LK + AP+ L +F ++ ++ Y R +EYG
Sbjct: 102 IDEADFKGESILVRMKTAWKKTPPISKIYVLSSMSITIGAWAFKNNQWPQLLLMDWDKVLKKLQVWRLVTSFLYFGNFGLDYILTLHFVWTYLGQLEKLHFRKPADFFVMLAFGMTVLHISLLILKNYLSPN-VLGHNLSCFLVYIWAKKYEGNDVNVMDLFHMSAELLPWFFVAQTLVLTGELPIADIIGIAAGHMYHYLNLKKMTSAPEFLQRIFEIDS-IKMRYERYEEEYG 334
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: A0A6V1KE03_HETAK (Derlin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KE03_HETAK) HSP 1 Score: 199 bits (505), Expect = 8.020e-55 Identity = 110/281 (39.15%), Postives = 163/281 (58.01%), Query Frame = 2
Query: 350 LKTVVKHVRDLRGGAVPSDDSDENFDSLSEEDDDDLELVD--------EEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYLRAEYARAGKEYG 1168
+ V H +RGGA DS+ +F+ + DD E D E+ F EA +R+ W K+ +T+ F +S+ I V C + N+NQWP+ L LDW+ Q WR LTPF GPLGVN++LT F WTYM+ LEK+ +EPH F ++ V G ++L+ L G D LGH+L+CF+V VWSR G V + D FE+ L+P+FF Q ++MEG+IP+ D+ G+LIG+A+ K LL AP + ++F++ L+++Y +E+G
Sbjct: 50 VSKCVFHNLAIRGGADSESDSESDFEYDDGDLSDDEEYFDGAVGDEGNEDSFKEATLVQRIMISWNKSAPLTKAFISLSVFITVVCQITNKNQWPAALQLDWKKATAGFQFWRFLTPFFHFGPLGVNYILTAQFVWTYMNDLEKIGCKEPHDFAIMCVIGGAALIALYGAMGWDPAG---LGHNLACFLVYVWSRVHEGQSVLLFDFFEMKAVLMPWFFALQPMIMEGMIPYPDILGILIGHAYYYLKTKKLLVAPAFIKSIFQH-PILKSKYLVFEEEFG 326
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: W7TX70_9STRA (Derlin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX70_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.150e-50 Identity = 91/212 (42.92%), Postives = 141/212 (66.51%), Query Frame = 2
Query: 458 ELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAP 1093
E V EEDF + +FA +LK+++ +TP VT+ + S+ + +FN+NQWP +LLLDW + +LQ+WR T FL+ G G N++L+ HF WTYM+ LEKL + P FV +++FG+S L++ + L G + LGH+LSC++V VWSR F G V+V+ +F LP +LP+FFVAQT+++E +P DL G+ +G+ + S + L++ P
Sbjct: 193 EGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQ---PHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPP 401
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: F0YAW8_AURAN (Derlin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAW8_AURAN) HSP 1 Score: 182 bits (461), Expect = 1.070e-48 Identity = 91/225 (40.44%), Postives = 138/225 (61.33%), Query Frame = 2
Query: 494 FAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYLRAEYARAGKEYG 1168
F R + W +TP +T+ + S+ + + NQWP +L L+W + Q+WR LT FLF GP G++++LT HF WTYM LEKL + EP F++++ FG SL+L L G ++ LGH+LSCF+V +W+R + G +V+V++ F + ELLP+FF AQT ++E +P DL G+ IG+ + + +L APKPL +LF +N L A Y +E+G
Sbjct: 98 FKSRTLKSWAETPPMTQAYVGASLALTCGSFLAFNNQWPEWLHLNWGAVFKRAQVWRPLTAFLFYGPFGLSYLLTIHFVWTYMGTLEKLSHTEPWEFLVMMAFGAGSLLLGVGLGGMK---THFLGHNLSCFLVYIWARTYEGQEVSVMEFFNIKAELLPWFFAAQTYLLEHELPIHDLLGIAIGHLYTVARQRKILGAPKPLQDLFTSNPALMARYEAMAEEFG 319
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: B7G004_PHATC (Derlin n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G004_PHATC) HSP 1 Score: 180 bits (456), Expect = 9.450e-48 Identity = 105/278 (37.77%), Postives = 164/278 (58.99%), Query Frame = 2
Query: 371 VRDLRGGAVPS-DDSDENF-----DSLSEEDD-DDLELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVN--ASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYL----RAEYARAGKEY 1165
+ D RGGA +DSD D L DD DD ++ E +F E N R+ W KTP +T+ + S + +FN+N++P+ LLLDW+P L KLQ+WRLLT FL GPLG+ +++T HF WTYM+ LE+L++ P+ F +++ FG S+V+ G + + LGH+LS F+V +WSR G +VN+ ++F E+LP+FF+AQT ++EG +P +D G++ G+ + G+LRAP +V + ++ L R+EY ++
Sbjct: 66 LTDTRGGAAAVFEDSDXXXXXXXXDFLFGMDDADDFDMA-ESEFAEDNTVDRMIDAWRKTPPLTKGYLSASFAATLYGYLFNRNEFPTVLLLDWKPVLQKLQIWRLLTSFLNFGPLGLGYLMTAHFVWTYMATLERLNHDRPYDFWIMIFFGQLSMVV-----GYPIFKLSPRFLGHNLSTFLVYIWSRYHEGMEVNMFELFNTRAEMLPWFFLAQTFLLEGELPVLDFLGIVFGHIYHHCKTVGILRAPDVVVEWYNGDSSLARRIRSEYKPISSDF 337
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: A0A7S1ZIK9_9STRA (Derlin n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK9_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.170e-47 Identity = 101/283 (35.69%), Postives = 164/283 (57.95%), Query Frame = 2
Query: 380 LRGGAV-PSDDSDENFDSLSEEDDD--------DLELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYT--------LGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAY----LRAEYARAGKEY 1165
+RGGA+ SDDS+ +FDS +DDD D E+ E+DF E R + + KTP T+ + S + ++N +P L L+W+PTL +LQLWR +T FL GPLG+ +++T HF WTYM+ LE+L++ P+ F ++++FG +S+V A Y+ LGH+LS F+V VWSR G +VN+ ++F E+LP+FF+AQT ++EG +P +DL G++ G+ + + +LR P L+N + ++ +R +Y + ++
Sbjct: 48 IRGGAILDSDDSEYDFDSDFSDDDDAFFDLNEEDFEISAEDDFNEDTSLSRFMEAFAKTPPFTKAYMTASFIATSVGYLTSKNDFPPLLQLNWKPTLTRLQLWRPITAFLNFGPLGLGYIMTCHFVWTYMATLERLNHAAPYDFWVMILFGCASMV-----------AGYSCLGLSPRFLGHNLSTFLVYVWSRYHEGMEVNMFELFNTRAEMLPWFFLAQTFLLEGELPVLDLLGIVFGHIYHHYKTTHVLRTPTFLINWYNSDGVYSTAVREKYKKISSDF 319
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: A0A7S1ZWZ3_TRICV (Derlin n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWZ3_TRICV) HSP 1 Score: 177 bits (449), Expect = 1.720e-46 Identity = 89/235 (37.87%), Postives = 140/235 (59.57%), Query Frame = 2
Query: 458 ELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYT--------LGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYLRA 1138
+++ E+DFGE +R W KTP T+ + S+ + + N+N++P LLLDW+P L ++QLWR LT FL +GP G+ + +T HF WTYMS LE+L++ P+ F ++++FG ++V A YT LGH+LS F+V VWSR G +VN+ ++F E LP+FF+AQT ++EG +P +DL G+ G+ + G++RAP+ LV + + +A
Sbjct: 125 DVIGEDDFGEDGTLERASAAWAKTPPFTKMYLSASVAATLWGYLLNKNEFPGVLLLDWKPILTRMQLWRPLTAFLNVGPFGLGYAMTGHFVWTYMSTLERLNHDRPYDFWIMILFGCVTMV-----------AGYTFLNISPRFLGHNLSTFLVYVWSRYHEGMEVNMFELFVTRAETLPWFFLAQTFLLEGELPVLDLLGIFFGHIYHHCKTSGIIRAPRALVEWYEKSESSKA 348
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: A0A836CBA0_9STRA (Derlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA0_9STRA) HSP 1 Score: 174 bits (441), Expect = 3.420e-46 Identity = 100/266 (37.59%), Postives = 154/266 (57.89%), Query Frame = 2
Query: 371 VRDLRGGAVPSDDSDENFDSLSEEDDDDLELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLVLLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAYLRAEYARAGKEYG 1168
V +GGA DD D+ FD E + +EDF E R+ Q W +TP +T+ FF VS + VFN+N WP L L+W +L+ Q+WR+ F G LG+N +++ +F WTYM +LE+++++ P F ML+ FG L++ T L G ++ + LGHS R++ G +VNV DMF L ELLP+FFVAQTL++EG +P +DL G+ +GY + ++ L++AP+ + F+ A + +Y R +E+G
Sbjct: 16 VLTAKGGA---DDEDDEFD----------EDIADEDFEEGAVGNRIGQLWARTPYLTKRFFYVSFALTAYAFVFNKNAWPKLLDLEW-DKVLRGQIWRVAATFFCFGALGMNCIISMYFVWTYMGELERMYFKRPQDFAMLMGFGALCLLVFTSLMG--IHGQF-LGHS----------REYEGVEVNVNDMFSLKAELLPWFFVAQTLVLEGEVPLLDLLGIFVGYLYMQLKIRKLIKAPEFVTQFFKLPAIAK-DYKRFEREFG 253
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Match: A0A1Z5JIU9_FISSO (Derlin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIU9_FISSO) HSP 1 Score: 173 bits (439), Expect = 2.190e-45 Identity = 95/247 (38.46%), Postives = 145/247 (58.70%), Query Frame = 2
Query: 449 DDLELVDEEDFGEANFAKRLKQDWVKTPIVTRTFFQVSIGIAVCCAVFNQNQWPSFLLLDWRPTLLKLQLWRLLTPFLFLGPLGVNFVLTTHFSWTYMSQLEKLHYREPHTFVMLLVFGMSSLV----LLTLLTGGDVNASYTLGHSLSCFMVTVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGLLIGYAWQTFSLKGLLRAPKPLVNLFRNNAY----LRAEYARAGKEY 1165
DD E+ E DF EAN R+ + W +TP +T+ + S G + +FN+N++P L L+W+P L +LQ+WR T FL GP G+ ++LT F WTYM+ LE+L++ P F +L++FG S+V LL L + LGH+LS ++V +WSR G +VN+ +MF ELLP+FF+AQT ++EG P +D G++ G+ + G+LRAP LV + ++ +R EY E+
Sbjct: 93 DDFEVA-EADFAEANTLDRVLEAWKRTPPLTKAYLTASFGATMYGYLFNKNEFPRILTLEWKPVLQRLQIWRPFTSFLNFGPFGLGYILTAQFVWTYMATLERLNHNRPFDFWILMLFGQLSMVIGYPLLKL-------SPRFLGHNLSTYLVYIWSRYHEGVEVNMFEMFNTKAELLPWFFLAQTFLLEGEPPVLDFLGIVFGHIYHHCKTVGILRAPDALVAWYHGDSEVAKRIREEYKVITSEF 331 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig882.20199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig882.20199.1 >prot_F-serratus_M_contig882.20199.1 ID=prot_F-serratus_M_contig882.20199.1|Name=mRNA_F-serratus_M_contig882.20199.1|organism=Fucus serratus male|type=polypeptide|length=526bp MVPRHPLCLVYVAILALELRSVSARPLTRLVAARSPPRDDKYDSAAIARGback to top mRNA from alignment at F-serratus_M_contig882:147312..152610+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig882.20199.1 ID=mRNA_F-serratus_M_contig882.20199.1|Name=mRNA_F-serratus_M_contig882.20199.1|organism=Fucus serratus male|type=mRNA|length=5299bp|location=Sequence derived from alignment at F-serratus_M_contig882:147312..152610+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig882:147312..152610+ >mRNA_F-serratus_M_contig882.20199.1 ID=mRNA_F-serratus_M_contig882.20199.1|Name=mRNA_F-serratus_M_contig882.20199.1|organism=Fucus serratus male|type=CDS|length=3156bp|location=Sequence derived from alignment at F-serratus_M_contig882:147312..152610+ (Fucus serratus male)back to top |