mRNA_F-serratus_M_contig88.20171.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig88.20171.1
Unique NamemRNA_F-serratus_M_contig88.20171.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig88.20171.1 vs. uniprot
Match: D7FV48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV48_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.120e-114
Identity = 210/284 (73.94%), Postives = 255/284 (89.79%), Query Frame = 1 
Query:    1 SHIQSLQKRWLEQIDSLKESQETLELERDSIKARLTDQKDVYKDLAISDALARELRRVPEENRSIKEYVSLKVFDLVASSKGELELTRRELERTQEQLLASTEASDLQRREDARARRLATAREEGLKVDVEALKERAEDMATRAREAQRAADENKDKARRFDEVEALLRTVQMELNAARALSKTQADALVDMADSEKAAARNAQDAAQRSTMLEMDKTYLKRELTEAQSRADRLGREAEAASDRLRDLERAKDAMAAELVTVRERTRTERDEKLQAEVARLREQ 852
            S +Q L+KRWLEQ+ +LK+ QE  E+ERDS++ARL D+KD+Y+DLA+SDALARELRRVPEE +++KEYVSLK +DLVASSK ELE TRRE     EQLLA+TE ++LQRREDARARRLATAREEGLKVD+EAL+ERAE+M+ RAREAQRAADEN DKAR FDEVE+LLRT ++EL+AARALSK+QA ALV++A+SEKAAAR AQDA+QRS MLEMDKTYL+REL+EAQ++ADRL RE+EA S+RLRDLER+KD +AAELV+VRERTR+E +E+L+AEV RLREQ
Sbjct:  320 SQVQILEKRWLEQVAALKKGQEMAEIERDSLEARLRDKKDMYEDLALSDALARELRRVPEEEQTVKEYVSLKAYDLVASSKAELERTRREXXXXXEQLLATTETAELQRREDARARRLATAREEGLKVDLEALRERAEEMSGRAREAQRAADENSDKARGFDEVESLLRTTRLELDAARALSKSQAAALVEVAESEKAAARTAQDASQRSLMLEMDKTYLQRELSEAQNKADRLDRESEAVSERLRDLERSKDTLAAELVSVRERTRSEHEERLEAEVGRLREQ 603
[Close]
BLAST of mRNA_F-serratus_M_contig88.20171.1 vs. uniprot
Match: A0A836CKM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.140e-33
Identity = 103/247 (41.70%), Postives = 144/247 (58.30%), Query Frame = 1 
Query:  109 DQKDVYKDLAISDALARELRRVPEENRSIKEYVSLKVFDLVASSKGELELTRRELERTQEQLLASTEASDLQRREDARARRLATAREEGLKVDVEALKERAEDMATRAREAQRAADENKDKARRFDEVEALLRTVQMELNAARALSKTQADALVDMADSEKAAARNAQDAAQRSTMLEMDKTYLKRELTEAQSRADRLGREAEAASDRLRDLERAKDAMAAELVTVRERTRTERDEKLQAEVARLRE 849
            D+KD+Y+ L ISDALA EL R   E  +++E+V+LK  DL+A+SK ELE  RRELERTQEQLLA+TE  +L+ R+ ARARRLA+AREEGL+++++A K   E    RA+EA++   E  DK RR+D   A                      + ++ D   AAAR A +  +R+ +LE+DK +L+REL  A++RA+   RE+                          R R + +E+L AEVARLRE
Sbjct:  594 DRKDLYRTLEISDALAVELTRRAPEELTVREFVALKAHDLMAASKAELERVRRELERTQEQLLATTETGELRERDGARARRLASAREEGLQLELDAAKGTMEAAKLRAKEAEQQVAELTDKGRRYDAAAARAEAXXXXXXXXXXXXXXXXXXVAELTDGAAAAARRADECERRAALLELDKAHLRRELGAAEARAEAAARESXXXXXXXXXXXXXXXXXXXXXXXXXXRPRADFEERLAAEVARLRE 840
[Close]
BLAST of mRNA_F-serratus_M_contig88.20171.1 vs. uniprot
Match: A0A7S1UE72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE72_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 9.910e-8
Identity = 63/164 (38.41%), Postives = 82/164 (50.00%), Query Frame = 1 
Query:  328 REDARARRLATAREEGLKVDVEALKERAEDMATRAREAQRAADENKDKARRFDEVEALLRTVQMELNAARALSKTQADAL----VDMADSEKAAARNAQDAAQRSTMLEMDKTYLKRELTEAQSRADRLGREAEAASDRLRDLERAKDAMAAELVTVRERTRTE 807
            RE ARARRLA AREEGLK+++ A     +    + + +Q      +DK RRFD V A    ++ E    R  S+ QA +L      +AD EKAAA    D   R   L +DK YL+R L EA +R DR    A    D  R LER +      LV  + R + E
Sbjct:    6 REAARARRLAGAREEGLKLELGAKDAELQSAVQKLKASQSRVATIEDKERRFDAVHAEREALRDEAQNLRRTSEEQAKSLRGFATSLADQEKAAA----DLNTRCIALSIDKDYLERCLAEATARGDRAEANAAQHKDEARRLERRRAEAVDALVEHQRRAQEE 165
[Close]
BLAST of mRNA_F-serratus_M_contig88.20171.1 vs. uniprot
Match: A0A2P6NDK2_9EUKA (Progesterone-induced-blocking factor 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NDK2_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 7.010e-6
Identity = 63/271 (23.25%), Postives = 127/271 (46.86%), Query Frame = 1 
Query:   37 QIDSLKESQETLELERDSIKARLTDQKDVYKDLAISDALARELRRVPEENRSIKEYVSLKVFDLVASSKGELELTRRELERTQEQLLASTEASDLQRREDARARRLATAREEGLKVDVEALKERAEDMATRAREAQRAADENKDKARRFDEVEALLRTVQMELNAARALSKTQADALVDMADSEKAAARNAQDAAQRSTMLEMDKTYLKRELTEAQSRADRLGREAEAASDR-LRDLERAKDAMAAELVTVRERTRTERDEKLQAEVARLR 846
            +I SL   Q+ LE +   +K R++D  +  K   +S+A   EL  +PE  RSI+++V++++F++    +GE+E  RRE++++      + E    +   + R +   ++R++ L+ +++  ++R   +     + Q   DE   +A  ++ +         E    R         L    +      R  +D  +   M+ MDK YL RE   A+ +  R+  +      R + +L+R +D    +L+  RE  ++E + KL A +  +R
Sbjct:  104 EIASLLRRQQELEAKNPVLKERMSDMIEALKGEPVSEATYIELHGIPERERSIRDHVAVRMFEMQQKFRGEIEALRREVQQSN-----NLELEKSKNEMEVRLQAAESSRKQ-LRTELDYAQDRCTKLQQEVTDRQVFNDETTSRAAHYESMRERYEKANAEKETLRHERSLLDSQLKQEKEERSEWTRVKEDMQKEMEMIRMDKAYLSREAESAREKL-RIAEDKNVRKKRKIEELKRMRDTATQQLIRERENQKSEYELKLDAAIGEMR 367
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FV48_ECTSI2.120e-11473.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKM7_9STRA1.140e-3341.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UE72_9STRA9.910e-838.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2P6NDK2_9EUKA7.010e-623.25Progesterone-induced-blocking factor 1 n=1 Tax=Pla... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:629066..633729 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue2.3e-100
Seed eggNOG ortholog2880.D7FV48
Preferred namePIBF1
KEGG koko:K16538
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000226,GO:0000278,GO:0000280,GO:0000819,GO:0001817,GO:0001818,GO:0001819,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003674,GO:0005102,GO:0005126,GO:0005136,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010562,GO:0010563,GO:0010565,GO:0010604,GO:0010605,GO:0010646,GO:0010647,GO:0010648,GO:0015630,GO:0016043,GO:0016310,GO:0018108,GO:0018193,GO:0018212,GO:0019216,GO:0019217,GO:0019220,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031392,GO:0031393,GO:0031399,GO:0031400,GO:0031401,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032653,GO:0032655,GO:0032695,GO:0032733,GO:0032814,GO:0032815,GO:0033036,GO:0033365,GO:0033674,GO:0034451,GO:0034613,GO:0036211,GO:0042304,GO:0042325,GO:0042326,GO:0042327,GO:0042509,GO:0042531,GO:0042532,GO:0042976,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044380,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044782,GO:0045717,GO:0045833,GO:0045859,GO:0045860,GO:0045922,GO:0045936,GO:0045937,GO:0046425,GO:0046426,GO:0046427,GO:0046890,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050000,GO:0050730,GO:0050731,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050865,GO:0050866,GO:0051055,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051276,GO:0051303,GO:0051310,GO:0051338,GO:0051347,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060271,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070727,GO:0070851,GO:0070925,GO:0071539,GO:0071704,GO:0071840,GO:0072698,GO:0080090,GO:0090307,GO:0098813,GO:0120031,GO:0120036,GO:0140014,GO:1901564,GO:1902531,GO:1902532,GO:1902533,GO:1902850,GO:1903047,GO:1904892,GO:1904893,GO:1904894,GO:1905508,GO:1905515,GO:2001279
EggNOG OGs28J7Y@1,2QRKC@2759
Ec32 ortholog descriptionProgesterone-induced-blocking factor 1
Ec32 orthologEc-12_005140.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons8
Model size855
Cds size852
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20171.1prot_F-serratus_M_contig88.20171.1Fucus serratus malepolypeptideF-serratus_M_contig88 629068..633729 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932565.6479552-CDS-F-serratus_M_contig88:629067..6292501622932565.6479552-CDS-F-serratus_M_contig88:629067..629250Fucus serratus maleCDSF-serratus_M_contig88 629068..629250 -
1690964368.5402522-CDS-F-serratus_M_contig88:629067..6292501690964368.5402522-CDS-F-serratus_M_contig88:629067..629250Fucus serratus maleCDSF-serratus_M_contig88 629068..629250 -
1622932565.6889648-CDS-F-serratus_M_contig88:629599..6296561622932565.6889648-CDS-F-serratus_M_contig88:629599..629656Fucus serratus maleCDSF-serratus_M_contig88 629600..629656 -
1690964368.556864-CDS-F-serratus_M_contig88:629599..6296561690964368.556864-CDS-F-serratus_M_contig88:629599..629656Fucus serratus maleCDSF-serratus_M_contig88 629600..629656 -
1622932565.703529-CDS-F-serratus_M_contig88:630029..6301621622932565.703529-CDS-F-serratus_M_contig88:630029..630162Fucus serratus maleCDSF-serratus_M_contig88 630030..630162 -
1690964368.5696018-CDS-F-serratus_M_contig88:630029..6301621690964368.5696018-CDS-F-serratus_M_contig88:630029..630162Fucus serratus maleCDSF-serratus_M_contig88 630030..630162 -
1622932565.7228575-CDS-F-serratus_M_contig88:630408..6305181622932565.7228575-CDS-F-serratus_M_contig88:630408..630518Fucus serratus maleCDSF-serratus_M_contig88 630409..630518 -
1690964368.5814002-CDS-F-serratus_M_contig88:630408..6305181690964368.5814002-CDS-F-serratus_M_contig88:630408..630518Fucus serratus maleCDSF-serratus_M_contig88 630409..630518 -
1622932565.74134-CDS-F-serratus_M_contig88:631097..6312001622932565.74134-CDS-F-serratus_M_contig88:631097..631200Fucus serratus maleCDSF-serratus_M_contig88 631098..631200 -
1690964368.5922918-CDS-F-serratus_M_contig88:631097..6312001690964368.5922918-CDS-F-serratus_M_contig88:631097..631200Fucus serratus maleCDSF-serratus_M_contig88 631098..631200 -
1622932565.7597973-CDS-F-serratus_M_contig88:632646..6327141622932565.7597973-CDS-F-serratus_M_contig88:632646..632714Fucus serratus maleCDSF-serratus_M_contig88 632647..632714 -
1690964368.6051471-CDS-F-serratus_M_contig88:632646..6327141690964368.6051471-CDS-F-serratus_M_contig88:632646..632714Fucus serratus maleCDSF-serratus_M_contig88 632647..632714 -
1622932565.771719-CDS-F-serratus_M_contig88:633004..6331191622932565.771719-CDS-F-serratus_M_contig88:633004..633119Fucus serratus maleCDSF-serratus_M_contig88 633005..633119 -
1690964368.6167696-CDS-F-serratus_M_contig88:633004..6331191690964368.6167696-CDS-F-serratus_M_contig88:633004..633119Fucus serratus maleCDSF-serratus_M_contig88 633005..633119 -
1622932565.7841976-CDS-F-serratus_M_contig88:633646..6337291622932565.7841976-CDS-F-serratus_M_contig88:633646..633729Fucus serratus maleCDSF-serratus_M_contig88 633647..633729 -
1690964368.6350486-CDS-F-serratus_M_contig88:633646..6337291690964368.6350486-CDS-F-serratus_M_contig88:633646..633729Fucus serratus maleCDSF-serratus_M_contig88 633647..633729 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig88.20171.1

>prot_F-serratus_M_contig88.20171.1 ID=prot_F-serratus_M_contig88.20171.1|Name=mRNA_F-serratus_M_contig88.20171.1|organism=Fucus serratus male|type=polypeptide|length=284bp
SHIQSLQKRWLEQIDSLKESQETLELERDSIKARLTDQKDVYKDLAISDA
LARELRRVPEENRSIKEYVSLKVFDLVASSKGELELTRRELERTQEQLLA
STEASDLQRREDARARRLATAREEGLKVDVEALKERAEDMATRAREAQRA
ADENKDKARRFDEVEALLRTVQMELNAARALSKTQADALVDMADSEKAAA
RNAQDAAQRSTMLEMDKTYLKRELTEAQSRADRLGREAEAASDRLRDLER
AKDAMAAELVTVRERTRTERDEKLQAEVARLREQ
back to top

mRNA from alignment at F-serratus_M_contig88:629066..633729-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig88.20171.1 ID=mRNA_F-serratus_M_contig88.20171.1|Name=mRNA_F-serratus_M_contig88.20171.1|organism=Fucus serratus male|type=mRNA|length=4664bp|location=Sequence derived from alignment at F-serratus_M_contig88:629066..633729- (Fucus serratus male)
TCGCATATCCAGAGCCTGCAGAAGCGGTGGCTGGAGCAGATCGACAGCCT
CAAGGAGTCTCAGGAGACGCTCGAGCTCGAAAGGTGGGCGTTCTCCCTGT
GGCCCAATCTCACCTGACAGAAAAACCCCCGTCCGACGTGGACGGGAAGT
CAACGTTAAGTCGTTATCTTGTAAGAACTAATATATTAAGTACGTGTATA
CGATGACAGCGGGGGTAGAGCGTTCTGCGGCGGCCTTTTTTCTCCTCGCG
TTTTGATGATTCGAGACCCATCGGGCTGCAGCTGGGTTGGAGTTCGTGGA
GAACACCGTTCAAGGAAGCATTTTTTATTACAGTAGTCAGGAAGGAATGA
CTTGCGAACGGTATTCCGCAAACGATATTCTGCGAACGATATCTTTGCGC
TTGCAAGCCTTGAAAAGGTGCGTTTCCCCGAGAACTTGACATTCGATGCC
GCCGCAGATTCACTTAGAACTCCCTACACCGAGAGAAAACGTAAGAGAGA
ACCTTTCCTTCCGCTTGTCTCTCCTTGTTTATTTATTTCTAAATACGAAC
ACTTGTGTGTGCTTGTGCGTATTTTCCGTGTGTGCGTTGCGTGAAAACGT
TGTGAATCAGAGATTCCATAAAGGCGCGTCTAACAGACCAAAAGGACGTT
TACAAGGACTTGGCCATCAGCGATGCGTTGGCGAGAGAGCTGAGAAGAGT
GCCCGAGGAAAATCGAAGCATTAAGGCGAGAGGCCCATGCTTATCTCACG
CATGGGACGACAATAAACCCCCAAACATACCGTCATTCTGTGATTGCCAT
AGTCGCGGGGGAAGGGTAGACTATATAATAACGGTACACTCACTTGCCCG
CTGTCCTGTCAAATTTGAGTCCTCCATACCAACTAGGTACTGTAGTAATA
GTAATATACCAGATTTCGCATTGTGTTGCAGTGTTTACTAGAAGGCATCG
CCACCCGTAACGCCCGCTTGTGAGAGTGGAAACCTAACCAAACCAAACTA
AACCTAACGGTGCAGGAATATGTGTCCCTCAAAGTGTTCGACCTGGTGGC
ATCGAGCAAGGGAGAGCTGGAGCTCACTCGAAGGTGAGGTTTGTACCCTC
GCGTATCCCTTTCCATGCATGCCTCCATCACGACCCCGGAATCTCGTTTT
GTCCCGCGCGGGTCTTTCGTCGGGGAATTATGTTTAATCCCGTCGACTAC
GTCCGCACGAGTTTGTTTCTTATTTTCGAACCCGGAATACCCCCCCCCCC
CCTCCCGCTTCCAACGCGACATTCTACTGGAAATAGTCTCTATGATATCA
CACTATCGCCTCAGCCTTGAATCCTCCAAGACTACTGTATGTGTATCGCA
CATACCCACTGTCACGCCTCCGATATTTTCTCCAAGACACTTGTCCACTA
CATACTACATACTATATATAGTATACCCAATAGTGTGCCGGTCGACCCCG
GTAGCTCACACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCC
CGGCAAACAGGATTTTTCTCACTAAAAACTAAAAAACCAAAATAAAAATG
CCCAACGGGTGGAGAACGATTAATTCGTTAAACAAAATTCGACTTCACGG
TCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACAAAAATCAAGTG
AAAAATCCTGTGTGACCTTCCTCCTGACCCCGGCTGGTAAACGAACTTGA
TGTCCAGAATGGATGGGAAGAAAACACAAAAACACACACACAATAGTGGG
TGAGGAAAAAGAGAGACGCACAAAAATTGGTTCGTAGTGATACCTGAAAA
GGCAGCACACGTGGAATGCTGGCCCTGTGCCGGCGGATTCTCGGGAATGA
ACGCCATCGACGCGCATTTGCGTGACCCGGTAAATTCGGGACTAGCCCGG
CCCGATGTCGGTTGACGGTATATACGGACACCGTCGTGGAAAGCGGGAGG
AATTCCGTCGGTGAGCTCCAGATTCAGCCTGAAAGTGGAGAATAGACGAG
CTGACGCCGGACGGGACGGTCGAACCCGTCTCGCGAGACCAAGTTTTTAT
GCGCGAACGGGGATAGGAAGAAATTACTTTCCCTGTTCAGCTGACCAATA
GCAGGATTGGCAACCATGTCCAGTTGATCCTTACTCTGTTAAATTTGCTG
ACCATACACCCATGCTACGGGCGCTTGCTGCCCCTTGGTGACCACAAAGC
TCGGCATGGCATCCATAAATAGCGAAGGTTTCGGCTCGTTTTCAACTATG
CACGGTAAAGCTAATTCGAGTGTTCTTTTTTGCCCAGTGCAGTCCGACAA
ACTTTCCGACGAACGTTCTGCCACTCCCATGTCGAGCGACAACGCGCGAG
TTCGCCCCATCCCCCGCAGCAATCGTTTTCCACTGACGTTGACGGGAACG
CGACTCGTTGGAAGAAGATACACGGAAGGGGTCCCGTTGTGTCGTCGGAG
GGCCGTGGTGTTGTGGCGATACGCTGTTACTCGCGATTTTTAGAATATCG
TGGTGTTATGGTCCGGCTCTGTGTCTCAGGGAGCTCGAGAGGACGCAGGA
GCAGCTTCTCGCCTCGACAGAAGCGAGTGACCTGCAGCGAAGGGAAGACG
CTAGAGCCCGGCGTCTGGCCACGGCCCGGGAGGTGGGTCTCGCTTGTGGT
TTATGCGTGCGTGTGTTCTTGAGTGAGCCATGTGGACTTGGTGAGGTCGT
ACGTACCAGGCACAGGAAGTTTTGAAAACCACGGTCGGTGTCCATGCTTA
AGAAGGAGTGCCTGCCGGCGATCGATTCCTGTTGGGTCATGTGTTGTTGA
TAGATCCATCCGTGTGTTCGTCGTTCGGTTTGATATTCCCAGCTCTTTTG
TGTTTGCTGCGCCAACCAGGCTGGAAAGAACCGCAGATGCCGTCGTATGG
TACAATTGGGTCCTGCAATTTGACGCGTCGCCTGTGAACCGCCAGCGGCG
CTCCCACCCTCGCTCGCCCACTTCCACGCTTTCGAGGAAGCCACTTTAGC
TCTATAGTTGCATGGTCTTTCGTCTGCTGGTGGATTTAACCCCCACTCCT
CACCCAACAACTCACTCCCCGTTACCCTCCCTGATTCTTGCTGCTCGTTC
ACCCCCCCCCCCCACACACTATGTCCTCCGCTCGACGTCTTTCCTCTCTC
AATTTCCTGCCTTTCGCACATGTTTTCTCGCGCTATTTTTTGTCGCACAT
ACCACCCAAAGGAGGGTTTGAAGGTGGACGTCGAGGCGTTGAAGGAGAGG
GCGGAGGACATGGCCACGAGGGCGAGAGAGGCCCAGCGGGCGGCCGATGA
AAACAAGGACAAGGCGCGAAGGTGTAGAAACATCCGCAAAGCCAGAACTT
ATCTAGTAGAAGGAGATGGGAGGCGTTTTTTTGGGGGGGGGATTTGGCGA
GCGTTACCCCCCCCCGTTCAACCGTACAATTTGTTCGAAAATCGCGTCCA
ATGGATTGTGTAACTGAAAGCTTTTCCGCCAGGTGAAAGGGTGATGAGGG
GTGTTCCCCACAAGTAAAAGGCGTGTGTGTGTTTGTATGTGTATACTATT
TGGCTTCCCCTTTTCAGGTTTGATGAAGTCGAGGCCCTGCTACGCACGGT
ACAGATGGAGCTGAACGCCGCGCGAGCCCTGTCCAAAACCCAGGCGGATG
CGCTGGTGGACATGGCGGACTCGGAAAAGGCGGCCGCGCGCAACGCCCAG
GTTCGTTGAGATCTTTTGAGCGGGTGGGAGGAGGTCAAGGATTCAACTCA
TCCATGCCCTTACGATTGTTCTCCGCTCAAGTGCGAAACGTGCTGGCATT
TGGCCACTCAAGACAAATACAACTCGAGCTTGTGGTTCTCAACATATGAC
AAGGCGTCAATAGCGTGCTGTTATTTGTCATTTCGTCGAATCTACAGCCC
GGGACAGCACATTGCGTTCCGATGAATAAAAAGTGCAGTGTTTCGGTGAT
TTTTTTCTCTGTCGAATCGAAGCCGCGGGCGTGCCTGATCCCCTGCGGCC
CCTGACGCTTTGGCGCGCACCACTCGTCGTTTTTATTTACTTTATTTATT
TATTGGGGGGGGGTTCTTGACAGGACGCCGCACAACGGAGCACCATGCTT
GAGATGGACAAGACCTATCTGAAACGGGAGGTAGGTCACCGATGACCGTG
CACGAACCGCCAGCATTCTCTTTCTGGTAGTCGCATCGGCGTCGACGCGA
GCGCCCACGAGGACAGGCCGCAATTTGTTTCAAGCAAGAAAATATCGACA
AGGTTGTGTGTCACGAAGTTTTTGAGGTTCAAGTTTCGCAAATATAATGG
AGGAGCGGGGGTCGCTGTCGAATCAACAAGCCTGCCCTTAACGCGGTGGC
CACGACAGCACCACATATATATGTAAAGAGTTTTTAATGCTATTTAAGAT
ATAATTTCAAGTCTAAGGCCGCTTTCATCCGCGCATCCCCGCACCCCTTC
CCCTACGCCGCCTTTTCGTCGCTGGACAGCTGACGGAGGCACAGAGCCGG
GCGGATCGCTTGGGCAGGGAGGCTGAAGCGGCCAGCGACCGCCTGAGGGA
CCTCGAGCGCGCTAAGGACGCGATGGCGGCGGAACTGGTGACGGTTCGCG
AGCGGACGCGCACGGAACGCGATGAGAAGCTGCAAGCAGAGGTGGCGAGG
CTGCGGGAGCAGAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig88:629066..633729-

>mRNA_F-serratus_M_contig88.20171.1 ID=mRNA_F-serratus_M_contig88.20171.1|Name=mRNA_F-serratus_M_contig88.20171.1|organism=Fucus serratus male|type=CDS|length=1704bp|location=Sequence derived from alignment at F-serratus_M_contig88:629066..633729- (Fucus serratus male)
TCGCATATCCAGAGCCTGCAGAAGCGGTGGCTGGAGCAGATCGACAGCCT
CAAGGAGTCTCAGGAGACGCTCGAGCTCGAAAGTCGCATATCCAGAGCCT
GCAGAAGCGGTGGCTGGAGCAGATCGACAGCCTCAAGGAGTCTCAGGAGA
CGCTCGAGCTCGAAAGAGATTCCATAAAGGCGCGTCTAACAGACCAAAAG
GACGTTTACAAGGACTTGGCCATCAGCGATGCGTTGGCGAGAGAGCTGAG
AAGAGTGCCCGAGGAAAATCGAAGCATTAAGAGATTCCATAAAGGCGCGT
CTAACAGACCAAAAGGACGTTTACAAGGACTTGGCCATCAGCGATGCGTT
GGCGAGAGAGCTGAGAAGAGTGCCCGAGGAAAATCGAAGCATTAAGGAAT
ATGTGTCCCTCAAAGTGTTCGACCTGGTGGCATCGAGCAAGGGAGAGCTG
GAGCTCACTCGAAGGAATATGTGTCCCTCAAAGTGTTCGACCTGGTGGCA
TCGAGCAAGGGAGAGCTGGAGCTCACTCGAAGGGAGCTCGAGAGGACGCA
GGAGCAGCTTCTCGCCTCGACAGAAGCGAGTGACCTGCAGCGAAGGGAAG
ACGCTAGAGCCCGGCGTCTGGCCACGGCCCGGGAGGGAGCTCGAGAGGAC
GCAGGAGCAGCTTCTCGCCTCGACAGAAGCGAGTGACCTGCAGCGAAGGG
AAGACGCTAGAGCCCGGCGTCTGGCCACGGCCCGGGAGGAGGGTTTGAAG
GTGGACGTCGAGGCGTTGAAGGAGAGGGCGGAGGACATGGCCACGAGGGC
GAGAGAGGCCCAGCGGGCGGCCGATGAAAACAAGGACAAGGCGCGAAGGA
GGGTTTGAAGGTGGACGTCGAGGCGTTGAAGGAGAGGGCGGAGGACATGG
CCACGAGGGCGAGAGAGGCCCAGCGGGCGGCCGATGAAAACAAGGACAAG
GCGCGAAGGTTTGATGAAGTCGAGGCCCTGCTACGCACGGTACAGATGGA
GCTGAACGCCGCGCGAGCCCTGTCCAAAACCCAGGCGGATGCGCTGGTGG
ACATGGCGGACTCGGAAAAGGCGGCCGCGCGCAACGCCCAGGTTTGATGA
AGTCGAGGCCCTGCTACGCACGGTACAGATGGAGCTGAACGCCGCGCGAG
CCCTGTCCAAAACCCAGGCGGATGCGCTGGTGGACATGGCGGACTCGGAA
AAGGCGGCCGCGCGCAACGCCCAGGACGCCGCACAACGGAGCACCATGCT
TGAGATGGACAAGACCTATCTGAAACGGGAGGACGCCGCACAACGGAGCA
CCATGCTTGAGATGGACAAGACCTATCTGAAACGGGAGCTGACGGAGGCA
CAGAGCCGGGCGGATCGCTTGGGCAGGGAGGCTGAAGCGGCCAGCGACCG
CCTGAGGGACCTCGAGCGCGCTAAGGACGCGATGGCGGCGGAACTGGTGA
CGGTTCGCGAGCGGACGCGCACGGAACGCGATGAGAAGCTGCAAGCAGAG
GTGGCGAGGCTGCGGGAGCAGCTGACGGAGGCACAGAGCCGGGCGGATCG
CTTGGGCAGGGAGGCTGAAGCGGCCAGCGACCGCCTGAGGGACCTCGAGC
GCGCTAAGGACGCGATGGCGGCGGAACTGGTGACGGTTCGCGAGCGGACG
CGCACGGAACGCGATGAGAAGCTGCAAGCAGAGGTGGCGAGGCTGCGGGA
GCAG
back to top