mRNA_F-serratus_M_contig88.20170.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig88.20170.1
Unique NamemRNA_F-serratus_M_contig88.20170.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: D7FV48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV48_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 4.510e-49
Identity = 121/245 (49.39%), Postives = 151/245 (61.63%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVG---------------GSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQRRLEAKVXXXXXXXXXXXXXKTTIERELQ 691
            LE++ML+EQV VHR EF ELEASTTRK SELQL+L  ERDKVRAFE+LELEVDGAV+RTGREMLL E  +  G      ++            E  SSNR    +                             IPMAP RRLRQAVLLAHKLL+KE EL++A+ EL E + R  + E+RA +AEGLLE+VEQPT+YM+D+IR K+ EIE LRA Q+RL AK              K+ ++++L+
Sbjct:  702 LEVDMLKEQVAVHRAEFAELEASTTRKTSELQLLLVGERDKVRAFEDLELEVDGAVMRTGREMLLEENGEDGGGGKEHGQE----------DGEHRSSNRSPQQTASPXXXXXXXXXXXXXXXXXXXXXXXXAAIPMAPHRRLRQAVLLAHKLLRKERELEVARSELVELESRVASWESRAVRAEGLLESVEQPTKYMIDSIREKDGEIEGLRAAQQRLVAKTEALERACREAAKEKSMLKKDLE 936          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A5D6XVQ6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVQ6_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.580e-10
Identity = 66/243 (27.16%), Postives = 122/243 (50.21%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVM-----IPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQRRLEAKVXXXXXXXXXXXXXKTTIERELQRSLSRRSD 715
            LE+EML +++ VHR EF +LEA++T +I++L+  L+ ER+K++ +E+LE+++D AV++TG   +L++  D  GN                             + VG   + +   + M     IP + +RR  Q+V LA +L+K + E    + +L         LE + R     L  + QP  Y+++ +  K+ E++  R    +L+ ++             K  ++++LQ+ L+RRSD
Sbjct:  622 LEVEMLEQKIQVHREEFAKLEATSTTRITQLEAALDIERNKLKEYEQLEVDLDDAVLQTG--AILSD--DRPGN-----------------------------NPVGDENSAVNLNDAMTTFSAIPSSHKRR--QSVSLAQRLVKFQRESLELQQKLKVAAFEHGQLERKVRHLTTQLAHLHQPQSYLIEKLNGKDLELQQARQASSQLQLQLQELREEHTVVVDAKMALQKQLQQVLARRSD 829          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A833SI45_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SI45_PHYIN)

HSP 1 Score: 70.9 bits (172), Expect = 3.750e-10
Identity = 57/196 (29.08%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIES 589
            LE+EML  +V  H+ EF  LE ++T +I++L+  LE E +K++ +E LE+++DGAV++TG   + AE + +  +   PS +   A  + +A                            IP   +RR +Q+VLLA K++K + E    + +L E       L+    + +  L T  QP  Y++D +  +E E++S
Sbjct:  530 LEIEMLARKVEAHKEEFARLETTSTTRITQLEAALEVEHNKLKEYELLEIDLDGAVVQTGE--IAAEGEGNHADGGEPSLKLLEAMTTFEA----------------------------IPTTTKRRFQQSVLLAQKVVKSQREAIALEQKLNEATSDRTRLQREITELKAKLVTFHQPQSYLLDKLTRREQELQS 695          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A6A3TDN6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TDN6_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.820e-10
Identity = 56/195 (28.72%), Postives = 99/195 (50.77%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIE 586
            LE++ML ++V  H+ EF  LE ++T +I++L+  LE ER+K++ +E LE+++DGAV++TG    +A                A   D A+  A   S  +   ++ G            IP   +RR +Q+VLLA +++K + E    + +L E       L+    + +  L T  QP  Y++D +  +E E++
Sbjct:  599 LELDMLTQKVEAHKEEFARLETTSTTRITQLEAALEVERNKLKEYELLEVDLDGAVVQTGE---IA----------------ADGADPANGSAATDSKLQEVMTTFGA-----------IPTTTKRRFQQSVLLAQRVVKSQREAIALEQKLTEVSNERGRLQQEVIELKAKLATFHQPQSYLIDKLTRREQELQ 763          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: K3WNV8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNV8_GLOUD)

HSP 1 Score: 64.7 bits (156), Expect = 4.360e-8
Identity = 52/197 (26.40%), Postives = 101/197 (51.27%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESL 592
            LE++ML +++ VH+ EF  LE+++T KI++L+  LE E++K++ +E+LE+++D AV++TG   L+ EE+D S +    +    + G                                 IP + +RR +Q+VLLA +++K + E    + +L       + L     + +  L    QP  Y++D +  K+ E++++
Sbjct:  584 LEIDMLGQKLEVHKEEFARLESTSTTKITQLEAALEIEKNKMKEYEQLEVDLDNAVLQTG--ALVDEEKDESSSLPKLNEIMTTFG--------------------------------AIPTSNKRRFQQSVLLAQRVVKYQRESLDFQHQLKAANAERSRLTLEIEQLKARLANFHQPQSYLIDKLSRKDEELQAV 746          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A0P1AQW4_PLAHL (Progesterone-induced-blocking factor 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQW4_PLAHL)

HSP 1 Score: 63.9 bits (154), Expect = 7.830e-8
Identity = 56/238 (23.53%), Postives = 111/238 (46.64%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQRRLEAKVXXXXXXXXXXXXXKTTIERELQRSLSRRSD 715
            LE+EML  ++  H+ EF +LE ++T +I++L+  L  ER+K++ +E LE+ +D A+++TG    +A  +D                           SN +           +      IP   +RR +Q+VLLA +L+K + E      +L E     + L+    + +  L +  QP  Y+++ +  +E E++  +   + +++++               +++ +LQ+ LSRR D
Sbjct:  582 LEIEMLTRKIETHKDEFTKLETTSTTRITQLEANLNVERNKLKEYELLEINLDDAILQTGE---IAASKD---------------------------SNEKTDDGSFLKLKEVVNTFGAIPTMKKRRFQQSVLLAQRLVKSQREAIALTQKLNEVISDRSRLQQEIIELKAQLASFHQPQSYLIEKLTRREQELQGAKRKHQEVQSQLQQLRVHYDQIREANLSLQHQLQQLLSRRED 789          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A6G0WMT4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMT4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.300e-7
Identity = 27/60 (45.00%), Postives = 52/60 (86.67%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTG 181
            LE EMLR++V VH+ EF +LEA++++ I+ L+L L++ER+K++A+++LE+++D A++++G
Sbjct:  402 LENEMLRQKVEVHKNEFAKLEATSSKSIAHLELALKSEREKLQAYDQLEVDMDNAILQSG 461          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A485LEL3_9STRA (Aste57867_20200 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEL3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.440e-7
Identity = 27/60 (45.00%), Postives = 51/60 (85.00%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTG 181
            LE EML+++V VH+ EF +LEASTT ++++L+L L  ERD+++++++LE+++D A++++G
Sbjct:  534 LESEMLKQKVEVHKTEFAKLEASTTNRMAQLELALAFERDRLKSYDQLEVDMDNAILQSG 593          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: W2PIA7_PHYPN (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2PIA7_PHYPN)

HSP 1 Score: 62.4 bits (150), Expect = 2.540e-7
Identity = 56/196 (28.57%), Postives = 96/196 (48.98%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVM-----IPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKE 574
            LE+EML ++V   + EF  LE ++T +I++L+  LE ER+K++ +E LE+++DGAVI+TG E+ + +                                  +G+   GS   +   EVM     IP   +RR +Q+VLLA K++K + E    + +L E       L+      +  L + +QP  Y++D +  +E
Sbjct:  575 LEIEMLTQKVEALKEEFARLETTSTTRITQLEAALEVERNKLKEYELLEIDLDGAVIQTG-EIAVGD----------------------------------KGNQADGS---VKVQEVMTTFGAIPTTTKRRFQQSVLLAQKVVKSQRETIALEQKLNEVTSDRTRLQHEVTGLKTKLASFQQPQSYLIDKLTRRE 732          
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: H3GZ37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZ37_PHYRM)

HSP 1 Score: 60.5 bits (145), Expect = 1.160e-6
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 2
Query:    2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVM-----IPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMV 553
            LE+EML ++V  H+ EF  LE ++T +I++L+  L  ER+K++ +E LE+++DGAV++TG E+   E                                  +G + GGS       EVM     IP   +RR +Q+VLLA +++K + E    +  L E       L+    + +  L +  QP  Y+V
Sbjct:  550 LEIEMLSQKVEAHKEEFARLETTSTTRITQLEAALGVERNKLKEYELLEIDLDGAVVQTG-EIAAGE----------------------------------KGEAGGGSKL----QEVMTTFGAIPTTTKRRFQQSVLLAQRVVKSQREAIALEQTLNEVSSERARLQQEVVELKAKLASFHQPQSYLV 699          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FV48_ECTSI4.510e-4949.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6XVQ6_9STRA1.580e-1027.16Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A833SI45_PHYIN3.750e-1029.08Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A6A3TDN6_9STRA3.820e-1028.72Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
K3WNV8_GLOUD4.360e-826.40Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AQW4_PLAHL7.830e-823.53Progesterone-induced-blocking factor 1 n=1 Tax=Pla... [more]
A0A6G0WMT4_9STRA2.300e-745.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LEL3_9STRA2.440e-745.00Aste57867_20200 protein n=1 Tax=Aphanomyces stella... [more]
W2PIA7_PHYPN2.540e-728.57Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
H3GZ37_PHYRM1.160e-629.10Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:624519..627063 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score187.2
Seed ortholog evalue1e-44
Seed eggNOG ortholog2880.D7FV48
Preferred namePIBF1
KEGG koko:K16538
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000226,GO:0000278,GO:0000280,GO:0000819,GO:0001817,GO:0001818,GO:0001819,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003674,GO:0005102,GO:0005126,GO:0005136,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010562,GO:0010563,GO:0010565,GO:0010604,GO:0010605,GO:0010646,GO:0010647,GO:0010648,GO:0015630,GO:0016043,GO:0016310,GO:0018108,GO:0018193,GO:0018212,GO:0019216,GO:0019217,GO:0019220,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031392,GO:0031393,GO:0031399,GO:0031400,GO:0031401,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032653,GO:0032655,GO:0032695,GO:0032733,GO:0032814,GO:0032815,GO:0033036,GO:0033365,GO:0033674,GO:0034451,GO:0034613,GO:0036211,GO:0042304,GO:0042325,GO:0042326,GO:0042327,GO:0042509,GO:0042531,GO:0042532,GO:0042976,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044380,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044782,GO:0045717,GO:0045833,GO:0045859,GO:0045860,GO:0045922,GO:0045936,GO:0045937,GO:0046425,GO:0046426,GO:0046427,GO:0046890,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050000,GO:0050730,GO:0050731,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050865,GO:0050866,GO:0051055,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051276,GO:0051303,GO:0051310,GO:0051338,GO:0051347,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060271,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070727,GO:0070851,GO:0070925,GO:0071539,GO:0071704,GO:0071840,GO:0072698,GO:0080090,GO:0090307,GO:0098813,GO:0120031,GO:0120036,GO:0140014,GO:1901564,GO:1902531,GO:1902532,GO:1902533,GO:1902850,GO:1903047,GO:1904892,GO:1904893,GO:1904894,GO:1905508,GO:1905515,GO:2001279
EggNOG OGs28J7Y@1,2QRKC@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons4
Model size817
Cds size810
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20170.1prot_F-serratus_M_contig88.20170.1Fucus serratus malepolypeptideF-serratus_M_contig88 624519..627056 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932565.532392-CDS-F-serratus_M_contig88:624518..6246871622932565.532392-CDS-F-serratus_M_contig88:624518..624687Fucus serratus maleCDSF-serratus_M_contig88 624519..624687 -
1690964368.4817245-CDS-F-serratus_M_contig88:624518..6246871690964368.4817245-CDS-F-serratus_M_contig88:624518..624687Fucus serratus maleCDSF-serratus_M_contig88 624519..624687 -
1622932565.5516524-CDS-F-serratus_M_contig88:625751..6259251622932565.5516524-CDS-F-serratus_M_contig88:625751..625925Fucus serratus maleCDSF-serratus_M_contig88 625752..625925 -
1690964368.4951057-CDS-F-serratus_M_contig88:625751..6259251690964368.4951057-CDS-F-serratus_M_contig88:625751..625925Fucus serratus maleCDSF-serratus_M_contig88 625752..625925 -
1622932565.5700986-CDS-F-serratus_M_contig88:626227..6265771622932565.5700986-CDS-F-serratus_M_contig88:626227..626577Fucus serratus maleCDSF-serratus_M_contig88 626228..626577 -
1690964368.5034359-CDS-F-serratus_M_contig88:626227..6265771690964368.5034359-CDS-F-serratus_M_contig88:626227..626577Fucus serratus maleCDSF-serratus_M_contig88 626228..626577 -
1622932565.5861127-CDS-F-serratus_M_contig88:626939..6270561622932565.5861127-CDS-F-serratus_M_contig88:626939..627056Fucus serratus maleCDSF-serratus_M_contig88 626940..627056 -
1690964368.511864-CDS-F-serratus_M_contig88:626939..6270561690964368.511864-CDS-F-serratus_M_contig88:626939..627056Fucus serratus maleCDSF-serratus_M_contig88 626940..627056 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932565.602914-UTR-F-serratus_M_contig88:627056..6270631622932565.602914-UTR-F-serratus_M_contig88:627056..627063Fucus serratus maleUTRF-serratus_M_contig88 627057..627063 -
1690964368.5256512-UTR-F-serratus_M_contig88:627056..6270631690964368.5256512-UTR-F-serratus_M_contig88:627056..627063Fucus serratus maleUTRF-serratus_M_contig88 627057..627063 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig88.20170.1

>prot_F-serratus_M_contig88.20170.1 ID=prot_F-serratus_M_contig88.20170.1|Name=mRNA_F-serratus_M_contig88.20170.1|organism=Fucus serratus male|type=polypeptide|length=270bp
MEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEV
DGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQ
GSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGEL
AETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQR
RLEAKVDALERTCRETAAEKTTIERELQRSLSRRSDACSRSSDATDRAPR
SEGRDHSPGFHDLQEAEREA
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mRNA from alignment at F-serratus_M_contig88:624519..627063-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig88.20170.1 ID=mRNA_F-serratus_M_contig88.20170.1|Name=mRNA_F-serratus_M_contig88.20170.1|organism=Fucus serratus male|type=mRNA|length=2545bp|location=Sequence derived from alignment at F-serratus_M_contig88:624519..627063- (Fucus serratus male)
GCTGGAGATGGAAATGCTGCGAGAGCAGGTCACGGTCCACCGCGGGGAGT TCGGAGAGCTGGAGGCCTCCACGACACGCAAGATCTCAGAGCTGCAACTC GTCCTCGAGGCTGAGCGAGACAAGGTGGCTGCTGATACCCGCCCAAAAAC GAAATTATACAGCATAGCTCTGCAGTAGCAATGTAAGGGTTGCCTCCCGC GCATTACATCTGCCGGCATTCGATTGTACACACACGTTTGTCGATGCGAG GTCCTCTTCTAGAGAACGTGCGAACTGTTTCATGGATACGCTCGCTCGCG AAATAACTCGATAAGGTCGGCTCCACCCGTCGTCCCCGAGGAGGCACGCA CGCCACGTTTCAGGGAAACCCTGTTAAGGTGTGGGGGCTATGAGCGAGGC AATGTCATTTCCTCCCCTACCGTCCAGCGGCATCCCGAAAAACAAAACAC CTTTCTCTGCAACACGCCTTTCCCCTGTCCTTCAAGGTCCGTGCCTTCGA AGAGCTGGAGCTGGAGGTCGACGGAGCTGTGATACGCACAGGGCGAGAGA TGCTGCTGGCGGAAGAGCAGGACCACTCGGGAAATCGAAGCAGTCCGTCG CGGCAACGAGCAAGCGCTGGCGATTCGGCCGATGCACCCGCAGAAAGGTG GAGTAGCAACAGGAGGCAAGGATCTTCGGTAGGCGGTTCTTGTGCGGGGA TTGGAGGAGCGGAGGTGATGATCCCCATGGCGCCGCAGCGTCGGCTCCGC CAGGCTGTGCTTCTGGCCCACAAACTGCTCAAGAAGGAAGCGGAGCTGGA CCTGGCCAAAGGAGAGCTCGCCGAAACCCAGCAGAGGTGATGGTTTAAAT ATACAAATATGTCTATCTTGTAATGCTGTTCGGAGGTGTTACGGATGGAC GGAGAAAGGGCAGGATATGATGGGAGACAACTCGATACCGTAGCTTTACT ATTATATGACTATTATAGGGAGTGAAGAGAAGGGTAGGTCCTGCTCTTGC GGCGATCAACGGGTTCCGAAGTGTTGAGAGAGGGCGATTTTTCTAGTTTT TAATATTTTTCTGAAAACGTGTAATTTGAAGCGGTCTTTTGATTGTTTTC CCTCCCCGTGCAATCCCTCACACCTTCCGCTCCGAAAGAGCGAACGCGTT GGAAACCCGCGCCAGAAAAGCGGAGGGTTTGCTGGAGACGGTCGAGCAGC CGACGAGGTATATGGTGGACGCCATCCGCTCTAAGGAAAGCGAGATCGAA TCCCTGAGGGCTACCCAGCGTCGGCTGGAGGCCAAAGTGGATGCGTTGGA GCGCACGTGCAGGTACAAGTCAAGAGTGGGCGCTTTTCTCTTTGGGAGGG AAATGTGCAGTGTTTCCGACCGATTTTCCCGCGCGGTGATGTGTTGATAC AGTATTATAGTGTAACAGTGTACAGTAGTGTATTAGTGCACAGTAGTGTA AAAGTGTCAGTAGTGTAGTATGTACAGTAGTATAATACGTAGTGTACAGT AGTGTACTAGTGCACAGTAGTGTTATAGTGTACAGTAGTGCAATAGTGTA CAGTAGTATAATTGTGTACAGTGGTGTAATAGTGTGCAGTAGTATAATGC CACTGTTTTTGTAATGGGTTGTGGTTGCACCGGGCAACGAAAAGGGACCA TCCCTCATCAGGGATCTGGCACGTAGACGCGCAAGTGTAATCTACTTAGT AGCGTAGGCGTTACCTATTTTAGTTTGCAGATCTCTTGCATGGGTACGCT GATGAGGGATCATGTGTACTGTACTTCTGCGATCATGAGCCTCCCCCGCC CCAAGAAAATAAACAAATACGTAATTTGGGTACGTTTTAATTGATGAATC ATGAGAAACGGTTATTTGCGGGGTTTTTTTTTTTAACACGACAGTCATAC GTACACAAGATCAGAGAGCTACGGTAGGTTTTGAAACGGTCAAAAGAGCG GCGAGAGTCTCGTACTTTTATTTCGTAGCAGCGGTACTACTTGCACCAAT GTACCAATCACAGCCACATATATAGCTCTAGACTAGTCAGTTCAATGTAC CATTCGTGGCGATCTATTTGGTGCATTGTACCAGTCATGGCGATCCGCTC GATTCATAACAACAGCAGTCATGGCGATACATGTAGGTCGCTCATTGTCG GAGTTGTAGTGATAATCGGCGTGCTCCTCCGGGGTAGGGGGTGCGCGGCG GACCAATAGATTCCGTTCGTTGTACCAGTCATCGCAGTAGTCTATATTTT ATTCATTGCAACTTTTGTCATGACGATACTTTTGGTTACATTTTTCCAGT CATGGCAATAGTCTACTACTGTGGTTCATTTTTTTCCTAATCGCCGGGGG CGTTCTCAAAATCTCTCGCCCGACAGGGAAACAGCCGCAGAAAAAACCAC AATAGAAAGAGAGCTCCAGCGTTCGCTATCGCGAAGAAGCGACGCGTGCT CTCGTTCATCCGACGCCACGGACAGAGCACCGCGGTCCGAGGGAAGAGAC CACAGCCCTGGGTTTCACGACCTTCAGGAGGCTGAGCGCGAGGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig88:624519..627063-

>mRNA_F-serratus_M_contig88.20170.1 ID=mRNA_F-serratus_M_contig88.20170.1|Name=mRNA_F-serratus_M_contig88.20170.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig88:624519..627063- (Fucus serratus male)
ATGGAAATGCTGCGAGAGCAGGTCACGGTCCACCGCGGGGAGTTCGGAGA
GCTGGAGGCCTCCACGACACGCAAGATCTCAGAGCTGCAACTCGTCCTCG
AGGCTGAGCGAGACAAGATGGAAATGCTGCGAGAGCAGGTCACGGTCCAC
CGCGGGGAGTTCGGAGAGCTGGAGGCCTCCACGACACGCAAGATCTCAGA
GCTGCAACTCGTCCTCGAGGCTGAGCGAGACAAGGTCCGTGCCTTCGAAG
AGCTGGAGCTGGAGGTCGACGGAGCTGTGATACGCACAGGGCGAGAGATG
CTGCTGGCGGAAGAGCAGGACCACTCGGGAAATCGAAGCAGTCCGTCGCG
GCAACGAGCAAGCGCTGGCGATTCGGCCGATGCACCCGCAGAAAGGTGGA
GTAGCAACAGGAGGCAAGGATCTTCGGTAGGCGGTTCTTGTGCGGGGATT
GGAGGAGCGGAGGTGATGATCCCCATGGCGCCGCAGCGTCGGCTCCGCCA
GGCTGTGCTTCTGGCCCACAAACTGCTCAAGAAGGAAGCGGAGCTGGACC
TGGCCAAAGGAGAGCTCGCCGAAACCCAGCAGAGGTCCGTGCCTTCGAAG
AGCTGGAGCTGGAGGTCGACGGAGCTGTGATACGCACAGGGCGAGAGATG
CTGCTGGCGGAAGAGCAGGACCACTCGGGAAATCGAAGCAGTCCGTCGCG
GCAACGAGCAAGCGCTGGCGATTCGGCCGATGCACCCGCAGAAAGGTGGA
GTAGCAACAGGAGGCAAGGATCTTCGGTAGGCGGTTCTTGTGCGGGGATT
GGAGGAGCGGAGGTGATGATCCCCATGGCGCCGCAGCGTCGGCTCCGCCA
GGCTGTGCTTCTGGCCCACAAACTGCTCAAGAAGGAAGCGGAGCTGGACC
TGGCCAAAGGAGAGCTCGCCGAAACCCAGCAGAGAGCGAACGCGTTGGAA
ACCCGCGCCAGAAAAGCGGAGGGTTTGCTGGAGACGGTCGAGCAGCCGAC
GAGGTATATGGTGGACGCCATCCGCTCTAAGGAAAGCGAGATCGAATCCC
TGAGGGCTACCCAGCGTCGGCTGGAGGCCAAAGTGGATGCGTTGGAGCGC
ACGTGCAGAGCGAACGCGTTGGAAACCCGCGCCAGAAAAGCGGAGGGTTT
GCTGGAGACGGTCGAGCAGCCGACGAGGTATATGGTGGACGCCATCCGCT
CTAAGGAAAGCGAGATCGAATCCCTGAGGGCTACCCAGCGTCGGCTGGAG
GCCAAAGTGGATGCGTTGGAGCGCACGTGCAGGGAAACAGCCGCAGAAAA
AACCACAATAGAAAGAGAGCTCCAGCGTTCGCTATCGCGAAGAAGCGACG
CGTGCTCTCGTTCATCCGACGCCACGGACAGAGCACCGCGGTCCGAGGGA
AGAGACCACAGCCCTGGGTTTCACGACCTTCAGGAGGCTGAGCGCGAGGC
CGGAAACAGCCGCAGAAAAAACCACAATAGAAAGAGAGCTCCAGCGTTCG
CTATCGCGAAGAAGCGACGCGTGCTCTCGTTCATCCGACGCCACGGACAG
AGCACCGCGGTCCGAGGGAAGAGACCACAGCCCTGGGTTTCACGACCTTC
AGGAGGCTGAGCGCGAGGCC
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