mRNA_F-serratus_M_contig88.20170.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: D7FV48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV48_ECTSI) HSP 1 Score: 184 bits (466), Expect = 4.510e-49 Identity = 121/245 (49.39%), Postives = 151/245 (61.63%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVG---------------GSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQRRLEAKVXXXXXXXXXXXXXKTTIERELQ 691
LE++ML+EQV VHR EF ELEASTTRK SELQL+L ERDKVRAFE+LELEVDGAV+RTGREMLL E + G ++ E SSNR + IPMAP RRLRQAVLLAHKLL+KE EL++A+ EL E + R + E+RA +AEGLLE+VEQPT+YM+D+IR K+ EIE LRA Q+RL AK K+ ++++L+
Sbjct: 702 LEVDMLKEQVAVHRAEFAELEASTTRKTSELQLLLVGERDKVRAFEDLELEVDGAVMRTGREMLLEENGEDGGGGKEHGQE----------DGEHRSSNRSPQQTASPXXXXXXXXXXXXXXXXXXXXXXXXAAIPMAPHRRLRQAVLLAHKLLRKERELEVARSELVELESRVASWESRAVRAEGLLESVEQPTKYMIDSIREKDGEIEGLRAAQQRLVAKTEALERACREAAKEKSMLKKDLE 936
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A5D6XVQ6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVQ6_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.580e-10 Identity = 66/243 (27.16%), Postives = 122/243 (50.21%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVM-----IPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQRRLEAKVXXXXXXXXXXXXXKTTIERELQRSLSRRSD 715
LE+EML +++ VHR EF +LEA++T +I++L+ L+ ER+K++ +E+LE+++D AV++TG +L++ D GN + VG + + + M IP + +RR Q+V LA +L+K + E + +L LE + R L + QP Y+++ + K+ E++ R +L+ ++ K ++++LQ+ L+RRSD
Sbjct: 622 LEVEMLEQKIQVHREEFAKLEATSTTRITQLEAALDIERNKLKEYEQLEVDLDDAVLQTG--AILSD--DRPGN-----------------------------NPVGDENSAVNLNDAMTTFSAIPSSHKRR--QSVSLAQRLVKFQRESLELQQKLKVAAFEHGQLERKVRHLTTQLAHLHQPQSYLIEKLNGKDLELQQARQASSQLQLQLQELREEHTVVVDAKMALQKQLQQVLARRSD 829
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A833SI45_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SI45_PHYIN) HSP 1 Score: 70.9 bits (172), Expect = 3.750e-10 Identity = 57/196 (29.08%), Postives = 99/196 (50.51%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIES 589
LE+EML +V H+ EF LE ++T +I++L+ LE E +K++ +E LE+++DGAV++TG + AE + + + PS + A + +A IP +RR +Q+VLLA K++K + E + +L E L+ + + L T QP Y++D + +E E++S
Sbjct: 530 LEIEMLARKVEAHKEEFARLETTSTTRITQLEAALEVEHNKLKEYELLEIDLDGAVVQTGE--IAAEGEGNHADGGEPSLKLLEAMTTFEA----------------------------IPTTTKRRFQQSVLLAQKVVKSQREAIALEQKLNEATSDRTRLQREITELKAKLVTFHQPQSYLLDKLTRREQELQS 695
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A6A3TDN6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TDN6_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.820e-10 Identity = 56/195 (28.72%), Postives = 99/195 (50.77%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIE 586
LE++ML ++V H+ EF LE ++T +I++L+ LE ER+K++ +E LE+++DGAV++TG +A A D A+ A S + ++ G IP +RR +Q+VLLA +++K + E + +L E L+ + + L T QP Y++D + +E E++
Sbjct: 599 LELDMLTQKVEAHKEEFARLETTSTTRITQLEAALEVERNKLKEYELLEVDLDGAVVQTGE---IA----------------ADGADPANGSAATDSKLQEVMTTFGA-----------IPTTTKRRFQQSVLLAQRVVKSQREAIALEQKLTEVSNERGRLQQEVIELKAKLATFHQPQSYLIDKLTRREQELQ 763
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: K3WNV8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNV8_GLOUD) HSP 1 Score: 64.7 bits (156), Expect = 4.360e-8 Identity = 52/197 (26.40%), Postives = 101/197 (51.27%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESL 592
LE++ML +++ VH+ EF LE+++T KI++L+ LE E++K++ +E+LE+++D AV++TG L+ EE+D S + + + G IP + +RR +Q+VLLA +++K + E + +L + L + + L QP Y++D + K+ E++++
Sbjct: 584 LEIDMLGQKLEVHKEEFARLESTSTTKITQLEAALEIEKNKMKEYEQLEVDLDNAVLQTG--ALVDEEKDESSSLPKLNEIMTTFG--------------------------------AIPTSNKRRFQQSVLLAQRVVKYQRESLDFQHQLKAANAERSRLTLEIEQLKARLANFHQPQSYLIDKLSRKDEELQAV 746
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A0P1AQW4_PLAHL (Progesterone-induced-blocking factor 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQW4_PLAHL) HSP 1 Score: 63.9 bits (154), Expect = 7.830e-8 Identity = 56/238 (23.53%), Postives = 111/238 (46.64%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVMIPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKESEIESLRATQRRLEAKVXXXXXXXXXXXXXKTTIERELQRSLSRRSD 715
LE+EML ++ H+ EF +LE ++T +I++L+ L ER+K++ +E LE+ +D A+++TG +A +D SN + + IP +RR +Q+VLLA +L+K + E +L E + L+ + + L + QP Y+++ + +E E++ + + +++++ +++ +LQ+ LSRR D
Sbjct: 582 LEIEMLTRKIETHKDEFTKLETTSTTRITQLEANLNVERNKLKEYELLEINLDDAILQTGE---IAASKD---------------------------SNEKTDDGSFLKLKEVVNTFGAIPTMKKRRFQQSVLLAQRLVKSQREAIALTQKLNEVISDRSRLQQEIIELKAQLASFHQPQSYLIEKLTRREQELQGAKRKHQEVQSQLQQLRVHYDQIREANLSLQHQLQQLLSRRED 789
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A6G0WMT4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMT4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.300e-7 Identity = 27/60 (45.00%), Postives = 52/60 (86.67%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTG 181
LE EMLR++V VH+ EF +LEA++++ I+ L+L L++ER+K++A+++LE+++D A++++G
Sbjct: 402 LENEMLRQKVEVHKNEFAKLEATSSKSIAHLELALKSEREKLQAYDQLEVDMDNAILQSG 461
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: A0A485LEL3_9STRA (Aste57867_20200 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEL3_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.440e-7 Identity = 27/60 (45.00%), Postives = 51/60 (85.00%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTG 181
LE EML+++V VH+ EF +LEASTT ++++L+L L ERD+++++++LE+++D A++++G
Sbjct: 534 LESEMLKQKVEVHKTEFAKLEASTTNRMAQLELALAFERDRLKSYDQLEVDMDNAILQSG 593
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: W2PIA7_PHYPN (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2PIA7_PHYPN) HSP 1 Score: 62.4 bits (150), Expect = 2.540e-7 Identity = 56/196 (28.57%), Postives = 96/196 (48.98%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVM-----IPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMVDAIRSKE 574
LE+EML ++V + EF LE ++T +I++L+ LE ER+K++ +E LE+++DGAVI+TG E+ + + +G+ GS + EVM IP +RR +Q+VLLA K++K + E + +L E L+ + L + +QP Y++D + +E
Sbjct: 575 LEIEMLTQKVEALKEEFARLETTSTTRITQLEAALEVERNKLKEYELLEIDLDGAVIQTG-EIAVGD----------------------------------KGNQADGS---VKVQEVMTTFGAIPTTTKRRFQQSVLLAQKVVKSQRETIALEQKLNEVTSDRTRLQHEVTGLKTKLASFQQPQSYLIDKLTRRE 732
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Match: H3GZ37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZ37_PHYRM) HSP 1 Score: 60.5 bits (145), Expect = 1.160e-6 Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 2
Query: 2 LEMEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVDGAVIRTGREMLLAEEQDHSGNRSSPSRQRASAGDSADAPAERWSSNRRQGSSVGGSCAGIGGAEVM-----IPMAPQRRLRQAVLLAHKLLKKEAELDLAKGELAETQQRANALETRARKAEGLLETVEQPTRYMV 553
LE+EML ++V H+ EF LE ++T +I++L+ L ER+K++ +E LE+++DGAV++TG E+ E +G + GGS EVM IP +RR +Q+VLLA +++K + E + L E L+ + + L + QP Y+V
Sbjct: 550 LEIEMLSQKVEAHKEEFARLETTSTTRITQLEAALGVERNKLKEYELLEIDLDGAVVQTG-EIAAGE----------------------------------KGEAGGGSKL----QEVMTTFGAIPTTTKRRFQQSVLLAQRVVKSQREAIALEQTLNEVSSERARLQQEVVELKAKLASFHQPQSYLV 699 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig88.20170.1 >prot_F-serratus_M_contig88.20170.1 ID=prot_F-serratus_M_contig88.20170.1|Name=mRNA_F-serratus_M_contig88.20170.1|organism=Fucus serratus male|type=polypeptide|length=270bp MEMLREQVTVHRGEFGELEASTTRKISELQLVLEAERDKVRAFEELELEVback to top mRNA from alignment at F-serratus_M_contig88:624519..627063- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig88.20170.1 ID=mRNA_F-serratus_M_contig88.20170.1|Name=mRNA_F-serratus_M_contig88.20170.1|organism=Fucus serratus male|type=mRNA|length=2545bp|location=Sequence derived from alignment at F-serratus_M_contig88:624519..627063- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig88:624519..627063- >mRNA_F-serratus_M_contig88.20170.1 ID=mRNA_F-serratus_M_contig88.20170.1|Name=mRNA_F-serratus_M_contig88.20170.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig88:624519..627063- (Fucus serratus male)back to top |