prot_F-serratus_M_contig88.20152.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig88.20152.1
Unique Name	prot_F-serratus_M_contig88.20152.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	97

Homology

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: D7FNU5_ECTSI (Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU5_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.070e-58
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0

Query:    1 QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLS GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSA+RIPEFHIEPELALELLMAANFLDC
Sbjct:    6 QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLS-GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A1V9Z8H2_9STRA (Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z8H2_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.040e-38
Identity = 68/95 (71.58%), Postives = 82/95 (86.32%), Query Frame = 0

Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            E+VKL+SAEG EF+V RKCA+VSGTIKAMLS G F E+  G+V F +IS PILEKVIQ++YYK RY+NS +RIP+F IEPE+ALELLMAAN+LDC
Sbjct:    9 EYVKLISAEGHEFFVARKCALVSGTIKAMLS-GHFSES-KGEVRFPDISAPILEKVIQYMYYKKRYSNSNARIPDFGIEPEMALELLMAANYLDC 101

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: L8GYQ9_ACACA (Elongin-C n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYQ9_ACACA)

HSP 1 Score: 131 bits (330), Expect = 6.420e-38
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    4 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGG-FGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLD 95
            VKL+SA+G EF VDRK AMVSGTIK+MLS  G F E A G+++F EISTPILEKVIQ+ YYK+RYTNS + IPEF IEPE+ALELLMAANFLD
Sbjct:   10 VKLISADGHEFVVDRKAAMVSGTIKSMLSGPGTFTEQAMGEINFREISTPILEKVIQYFYYKLRYTNSTTEIPEFPIEPEVALELLMAANFLD 102

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A6U1KLA4_9STRA (Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLA4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.010e-37
Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 0

Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            ++VKL+SAEG EF+VDR+CA  SGTIKAMLS G F E+ SG++ F EISTPILEKVIQ+ YYK  Y NS  RIPEF IEPE+ALELLMAANFLDC
Sbjct:   26 QYVKLISAEGHEFFVDRQCAQTSGTIKAMLS-GSFTES-SGEIKFPEISTPILEKVIQYFYYKASYKNSQVRIPEFAIEPEVALELLMAANFLDC 118

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A7S2XYA0_9STRA (Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA0_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.950e-37
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    4 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            VKLVS+EG EF+ DR+CAMVSGTI AMLS G F E+  G+V F EIS+ ILEK+IQ+ YYKVRYTNS SRIP+F IEPE+ALELLMAANFLDC
Sbjct:   15 VKLVSSEGHEFYCDRRCAMVSGTINAMLS-GQFAES-RGEVTFPEISSAILEKIIQYCYYKVRYTNSTSRIPDFPIEPEIALELLMAANFLDC 105

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A6G0WB49_9STRA (Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB49_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.610e-37
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 0

Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            ++VKL+SAEG EF+V RKCAMVSGTIKAML+ G F E+  G+V F +IS PILEK+IQ+ Y+KVRY+NS +R+P+F IEPE+ALELLMAAN+LDC
Sbjct:   11 DYVKLISAEGQEFYVARKCAMVSGTIKAMLT-GHFSES-KGEVRFPDISAPILEKIIQYFYFKVRYSNSNARLPDFTIEPEIALELLMAANYLDC 103

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A1W0A8X8_9STRA (Elongin-C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8X8_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.940e-37
Identity = 66/95 (69.47%), Postives = 82/95 (86.32%), Query Frame = 0

Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            E+VKLVSAEG EF+V RKCA+VSGTIKAML  G F E+  G++ F +IS PILEKVIQ++YYK RY+NS +RIPEF+IEPE++LELLMAAN+L+C
Sbjct:   13 EYVKLVSAEGHEFYVARKCALVSGTIKAML-LGQFSES-KGEIRFPDISAPILEKVIQYLYYKKRYSNSNARIPEFNIEPEMSLELLMAANYLEC 105

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: K8Z122_NANGC (Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z122_NANGC)

HSP 1 Score: 129 bits (323), Expect = 6.630e-37
Identity = 66/95 (69.47%), Postives = 81/95 (85.26%), Query Frame = 0

Query:    2 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            ++VKL+SAEG EF VDRKCA VS TI+AML AG F E+  G+++F EIST ILEKVIQ++YYKVRYTNS  ++P+F +EPE+ALELLMAANFLDC
Sbjct:    7 KYVKLISAEGHEFIVDRKCACVSKTIEAML-AGNFAES-KGEINFPEISTNILEKVIQYLYYKVRYTNSPQKVPDFKMEPEIALELLMAANFLDC 99

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: F0YER3_AURAN (Elongin-C (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER3_AURAN)

HSP 1 Score: 127 bits (318), Expect = 3.120e-36
Identity = 67/93 (72.04%), Postives = 75/93 (80.65%), Query Frame = 0

Query:    8 SAEGAEFWVDRKCAMVSGTIKAMLSAGG----FGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 96
            SAEG EFWVDRKCA  SGTIKAMLS       F E+ SG++ F EISTPILEKVIQ+ YYK+RYTNS  RIPEF I+PE+ALELLMA+NFLDC
Sbjct:    1 SAEGHEFWVDRKCANTSGTIKAMLSGPRGPRQFTES-SGEIKFPEISTPILEKVIQYFYYKLRYTNSQVRIPEFQIDPEMALELLMASNFLDC 92

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BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A6B2LUV1_9EUKA (Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LUV1_9EUKA)

HSP 1 Score: 126 bits (317), Expect = 4.300e-36
Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 0

Query:    6 LVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLD 95
            ++S+EG EF VDRKCAMVSGTI++ML  GGF E+ +G++ F EI+T ILEKVIQ+ YYKV+YTNS  + P+F IEPE+ALELLMAANFLD
Sbjct:    1 MISSEGHEFIVDRKCAMVSGTIRSMLDGGGFLESEAGEISFKEINTNILEKVIQYFYYKVKYTNSTGQTPDFPIEPEIALELLMAANFLD 90

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNU5_ECTSI	1.070e-58	97.92	Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN...	[more]
A0A1V9Z8H2_9STRA	6.040e-38	71.58	Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID...	[more]
L8GYQ9_ACACA	6.420e-38	74.19	Elongin-C n=1 Tax=Acanthamoeba castellanii str. Ne...	[more]
A0A6U1KLA4_9STRA	1.010e-37	72.63	Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=356...	[more]
A0A7S2XYA0_9STRA	1.950e-37	74.19	Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 ...	[more]
A0A6G0WB49_9STRA	2.610e-37	68.42	Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=1008...	[more]
A0A1W0A8X8_9STRA	3.940e-37	69.47	Elongin-C n=1 Tax=Thraustotheca clavata TaxID=7455...	[more]
K8Z122_NANGC	6.630e-37	69.47	Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 Rep...	[more]
F0YER3_AURAN	3.120e-36	72.04	Elongin-C (Fragment) n=1 Tax=Aureococcus anophagef...	[more]
A0A6B2LUV1_9EUKA	4.300e-36	67.78	Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 1..96 e-value: 1.5E-15 score: 67.6
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 3..64 e-value: 1.9E-9 score: 37.6
None	No IPR available	GENE3D	3.30.710.10		coord: 1..96 e-value: 3.8E-30 score: 106.3
None	No IPR available	PANTHER	PTHR20648:SF0	ELONGIN-C	coord: 2..96
IPR039948	Elongin-C	PANTHER	PTHR20648	FAMILY NOT NAMED	coord: 2..96
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 3..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig88	contig	F-serratus_M_contig88:250200..258582 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig88.20152.1	mRNA_F-serratus_M_contig88.20152.1	Fucus serratus male	mRNA	F-serratus_M_contig88 250200..258582 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig88.20152.1 ID=prot_F-serratus_M_contig88.20152.1|Name=mRNA_F-serratus_M_contig88.20152.1|organism=Fucus serratus male|type=polypeptide|length=97bp
QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEIS
TPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001232	SKP1-like
IPR016073	Skp1_comp_POZ
IPR039948	ELC1
IPR011333	SKP1/BTB/POZ_sf