prot_F-serratus_M_contig88.20149.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig88.20149.1
Unique Nameprot_F-serratus_M_contig88.20149.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length110
Homology
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BLAST of mRNA_F-serratus_M_contig88.20149.1 vs. uniprot
Match: D7FNU7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU7_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 1.650e-5
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:   50 RLLELDACPNLISLDVSSNALTELDEATGLSKXXXXXXXXXXXXSLEAVGGLRSFMALGHL 110
            RL+ LDACP++ SLDVS NALTELD A  L +             LE++GGL   MALG+L
Sbjct:    3 RLVGLDACPSVTSLDVSWNALTELDSAC-LEECKELWIVDASHNRLESLGGLSRVMALGYL 62
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BLAST of mRNA_F-serratus_M_contig88.20149.1 vs. uniprot
Match: A0A6H5J9X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X4_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 5.730e-5
Identity = 31/61 (50.82%), Postives = 36/61 (59.02%), Query Frame = 0 
Query:   50 RLLELDACPNLISLDVSSNALTELDEATGLSKXXXXXXXXXXXXSLEAVGGLRSFMALGHL 110
            RL+ LDACP + SLDVS NALTELD A  L               LE++GGL   MALG+L
Sbjct:    3 RLVGLDACPGVTSLDVSWNALTELDSAC-LEGCKELWIVDASHNRLESLGGLSRVMALGYL 62
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNU7_ECTSI1.650e-550.82Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5J9X4_9PHAE5.730e-550.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 12..110
e-value: 8.4E-11
score: 43.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 59..80
score: 7.073
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 84..105
score: 5.871
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 39..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:243973..244690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20149.1mRNA_F-serratus_M_contig88.20149.1Fucus serratus malemRNAF-serratus_M_contig88 243971..244690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig88.20149.1 ID=prot_F-serratus_M_contig88.20149.1|Name=mRNA_F-serratus_M_contig88.20149.1|organism=Fucus serratus male|type=polypeptide|length=110bp
ILYSATRTPIDRLVKVMGVTIIRPGILRHLCKEPLGEVESVRLRGRGILR
LLELDACPNLISLDVSSNALTELDEATGLSKCRNLWMLDASNNSLEAVGG
LRSFMALGHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt