prot_F-serratus_M_contig879.20135.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig879.20135.1
Unique Nameprot_F-serratus_M_contig879.20135.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length311
Homology
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BLAST of mRNA_F-serratus_M_contig879.20135.1 vs. uniprot
Match: D8LSI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI2_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 4.080e-74
Identity = 136/275 (49.45%), Postives = 176/275 (64.00%), Query Frame = 0 
Query:   30 QTLIDTADTHVFHLDLHLRRRSPSNSSPNNTSSVHWFEGFGETMQAGSAAAAVATLSHPIRRMLSFLLKEEVGLKEALLWTKGQGE---------QGYQILDNYLVRVLAGQSTWELPPGAVGEAEFHNAKIALGKFEVLLRADCLAVDLPLLGPYIGRVFSAHNALEITSAGSDAEVSP---VLTPGPIAESLIRRNRWDLQLWDYAESLIMSRSTTLDSYLCSKQTWATKERQPGTGRRAAVFNSPDFHATSLAMFSCVLVSWGFHVTAIVQE 292
            +TLID  D++++HLDL +++   ++++   T+   WF+GFG     G    A  T+ HPI+R+L  L  E VGL+E + W +  G+         QGYQ LDNYLVRVLAG+S W+LPPG VG++E   A+IALGKFEVLLRADCLAVDLPLL PY+ +   A    +      D   S     L  G     L+R NRWDLQLWD+A  L+ SRSTT + YLC     A ++R PG GRRA V+NSP FH T +AMFSCVL+S GF VTA+V+E
Sbjct:   39 RTLIDGTDSNIYHLDLLVQQPYDASTT---TAQPPWFDGFG-----GRDGVAAVTVGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGKSELQAARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAHYLVFGKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLCGSSASARRQRMPGDGRRAVVYNSPSFHITGVAMFSCVLMSLGFDVTAVVKE 305
[Close]
BLAST of mRNA_F-serratus_M_contig879.20135.1 vs. uniprot
Match: A0A6H5KKJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ1_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.960e-73
Identity = 140/279 (50.18%), Postives = 175/279 (62.72%), Query Frame = 0 
Query:   30 QTLIDTADTHVFHLDLHLRRRSPSNSSPNNTSSVHWFEGFGETMQAGSAAAAVATLSHPIRRMLSFLLKEEVGLKEALLWTKGQGE---------QGYQILDNYLVRVLAGQSTWELPPGAVGEAEFH----NAKIALGKFEVLLRADCLAVDLPLLGPYIGRVFSAHNALEITSAGSDAEVSP---VLTPGPIAESLIRRNRWDLQLWDYAESLIMSRSTTLDSYLCSKQTWATKERQPGTGRRAAVFNSPDFHATSLAMFSCVLVSWGFHVTAIVQE 292
            +TLID  D+ + HLDL +++  P ++SP  T+   WF+GFG     G    A  T+ HPI+R+L  L  E VGL+E + W +  G+         QGYQ LDNYLVRVLAG+S W+LPPG VG+ E       A+IALGKFEVLLRADCLAVDLPLL PY+ +   A    +      D   S     L  G     L+R NRWDLQLWD+A  L+ SRSTT + YLC   T A ++R PG GRRA V+NSP FH T +AMFSCVL+S GF VTA+V+E
Sbjct:   39 RTLIDGTDSSIHHLDLLVQQ--PYDASPT-TAQPPWFDGFG-----GRDGVAAVTIGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGKTELQVGIPAARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAYYLVFGKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLCGSSTSARRQRMPGDGRRAVVYNSPSFHVTGVAMFSCVLMSLGFDVTAVVKE 309
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig879.20135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSI2_ECTSI4.080e-7449.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKJ1_9PHAE1.960e-7350.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..310
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.628

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig879contigF-serratus_M_contig879:19084..21917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig879.20135.1mRNA_F-serratus_M_contig879.20135.1Fucus serratus malemRNAF-serratus_M_contig879 12498..42173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig879.20135.1 ID=prot_F-serratus_M_contig879.20135.1|Name=mRNA_F-serratus_M_contig879.20135.1|organism=Fucus serratus male|type=polypeptide|length=311bp
MVPTPSTVVSSIVFAMAASVVVCTDTSVVQTLIDTADTHVFHLDLHLRRR
SPSNSSPNNTSSVHWFEGFGETMQAGSAAAAVATLSHPIRRMLSFLLKEE
VGLKEALLWTKGQGEQGYQILDNYLVRVLAGQSTWELPPGAVGEAEFHNA
KIALGKFEVLLRADCLAVDLPLLGPYIGRVFSAHNALEITSAGSDAEVSP
VLTPGPIAESLIRRNRWDLQLWDYAESLIMSRSTTLDSYLCSKQTWATKE
RQPGTGRRAAVFNSPDFHATSLAMFSCVLVSWGFHVTAIVQERSVLLLIE
EISHVFKSST*
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