mRNA_F-serratus_M_contig8781.20134.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: A0A7J6B7P6_AMEME (Uncharacterized protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6B7P6_AMEME) HSP 1 Score: 54.7 bits (130), Expect = 4.040e-7 Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQTDTSCETSEAGPKTILCRHFIK 168
CSPNPC+NGGIC++D + C C +G+ G+ C+ + C T + K HF++
Sbjct: 255 CSPNPCMNGGICSLDTVKNFHCACQAGFTGLQCENKSGCVTPQ---KPAHGEHFLQ 307
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: A0A5C6PR10_9TELE (Hyaluronan-binding protein 2 n=4 Tax=Takifugu TaxID=31032 RepID=A0A5C6PR10_9TELE) HSP 1 Score: 54.3 bits (129), Expect = 5.440e-7 Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQ 102
C PNPCLNGG+C+V P GG++C C Y G CQ
Sbjct: 73 CEPNPCLNGGVCSVGPDGGFVCSCPELYSGRKCQ 106
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: A0A674N4C3_TAKRU (Uncharacterized protein n=2 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674N4C3_TAKRU) HSP 1 Score: 54.3 bits (129), Expect = 5.440e-7 Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQ 102
C PNPCLNGG+C+V P GG++C C Y G CQ
Sbjct: 79 CEPNPCLNGGVCSVGPDGGFVCSCPELYSGRKCQ 112
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: UPI001B7F72A0 (protein Z, vitamin K-dependent plasma glycoprotein a n=2 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7F72A0) HSP 1 Score: 53.9 bits (128), Expect = 7.360e-7 Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQTD-TSCETSEAGPKTILCRHFIKP 171
CSPNPCLNGG+C D G Y C+C +G+ G C+TD T C + C F KP
Sbjct: 93 CSPNPCLNGGMC-ADSVGRYDCNCKAGFSGDRCETDNTQCRGN--------CNQFCKP 141
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: UPI001EEB20AA (inactive serine protease PAMR1 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEB20AA) HSP 1 Score: 53.5 bits (127), Expect = 1.030e-6 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQTDTSCETSEAGPKTILCRHFI 165
CSPNPC NGG+C++D + C C +G+ G+ C+ + C T PK HF+
Sbjct: 249 CSPNPCRNGGVCSLDTVEAFQCACKAGFTGLQCEKKSGCVTP---PKPAHGDHFL 300
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: UPI0018D967FB (uncharacterized protein LOC119723228 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D967FB) HSP 1 Score: 53.1 bits (126), Expect = 1.420e-6 Identity = 25/60 (41.67%), Postives = 29/60 (48.33%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQTDTSCETSEAGPKTILCRHFIKPVQY 180
CSPNPCLNGGIC GY CDC Y G C+ S P + F+ P Q+
Sbjct: 178 CSPNPCLNGGICDSSSGDGYRCDCPEEYIGEHCEE----RASNCPPGVEMAHCFVDPCQF 233
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: A0A814JB92_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A814JB92_9BILA) HSP 1 Score: 48.5 bits (114), Expect = 3.140e-6 Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQ 102
C+PNPCLNGG+C + GG+ C C G+ G C+
Sbjct: 3 CTPNPCLNGGMCISNGFGGFTCQCPPGFSGQRCE 36
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: A0A5N5K8V9_PANHP (Uncharacterized protein n=4 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5K8V9_PANHP) HSP 1 Score: 51.6 bits (122), Expect = 4.920e-6 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQTDTSCETSE 129
CSPNPC+NGGIC++D + C C +G+ G+ C+ C T +
Sbjct: 244 CSPNPCMNGGICSLDTFKTFHCACQAGFTGLQCENKAGCVTPQ 286
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: UPI000F4EA386 (inactive serine protease PAMR1 n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4EA386) HSP 1 Score: 50.8 bits (120), Expect = 9.200e-6 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQT---DTSCETSE 129
CSPNPC+NGGIC +D + C C +G+ G+ C+ ++ CET +
Sbjct: 255 CSPNPCMNGGICALDTVQTFHCACQAGFTGLLCENKKAESGCETPQ 300
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Match: A0A556TLF5_BAGYA (Excitatory amino acid transporter 2 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556TLF5_BAGYA) HSP 1 Score: 50.4 bits (119), Expect = 1.270e-5 Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 1
Query: 1 CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQ-TDTSCETSEAGPKTILCRHFI 165
C+PNPC+NGGIC++D + C C +G+ G+ C+ T+ C T PK HF+
Sbjct: 176 CNPNPCMNGGICSLDTLKTFHCACQAGFTGLQCENTEFGCVTP---PKPTHGDHFL 228 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8781.20134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8781.20134.1 >prot_F-serratus_M_contig8781.20134.1 ID=prot_F-serratus_M_contig8781.20134.1|Name=mRNA_F-serratus_M_contig8781.20134.1|organism=Fucus serratus male|type=polypeptide|length=62bp CSPNPCLNGGICTVDPAGGYLCDCASGYGGMACQTDTSCETSEAGPKTILback to top mRNA from alignment at F-serratus_M_contig8781:7..192- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8781.20134.1 ID=mRNA_F-serratus_M_contig8781.20134.1|Name=mRNA_F-serratus_M_contig8781.20134.1|organism=Fucus serratus male|type=mRNA|length=186bp|location=Sequence derived from alignment at F-serratus_M_contig8781:7..192- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8781:7..192- >mRNA_F-serratus_M_contig8781.20134.1 ID=mRNA_F-serratus_M_contig8781.20134.1|Name=mRNA_F-serratus_M_contig8781.20134.1|organism=Fucus serratus male|type=CDS|length=372bp|location=Sequence derived from alignment at F-serratus_M_contig8781:7..192- (Fucus serratus male)back to top |