mRNA_F-serratus_M_contig876.20120.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: D7G408_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G408_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 2.850e-133 Identity = 193/254 (75.98%), Postives = 224/254 (88.19%), Query Frame = 2
Query: 122 KEDKGGEEED--GETVFLPTGAGNDVRLFRAKLRAGSEHNWQQQLRRNVNTLQLGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTYDDL 877
K++ GEEED G+TVFLPTG D RLFRAKLRAGS+ W++QLRRNVN QL GQDAWAHELSAPEKGCLIVAK++ FS+ QTYFNEAVIFLAS+DE GSAGFILNRPTS++LGDL+EG+ L F++ PLYLGGDVGEGNVQI+HPFGP++L ++MEIIPGV IGG+V+EA+RMVA+G AK DDF+F LHLCGWAPGQLE EI+RGVW P ATS+NVI+KHCL LPVP+WREVM LMGPK+GLLARDTYDDL
Sbjct: 136 KKEAEGEEEDKEGDTVFLPTGDNKDFRLFRAKLRAGSDEKWKEQLRRNVNVGQLAGQDAWAHELSAPEKGCLIVAKSTQFSMAQTYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKTPLYLGGDVGEGNVQILHPFGPEKLTDSMEIIPGVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 389
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A0A6H5K1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D3_9PHAE) HSP 1 Score: 345 bits (884), Expect = 2.330e-112 Identity = 180/280 (64.29%), Postives = 211/280 (75.36%), Query Frame = 2
Query: 128 DKGGEE-EDGETVFLPTGAGNDVRLFRAKLRAGSEHNWQQQLRRNVNTLQLGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDV------GEGNVQIIH--------------PFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNV---------IMKHCLGLPVPLWREVMNLMGPKFGLLARDTYDDL 877
D+G EE E+G+TVFLPTG D RLFRAKLRAGS+ W++QLRRNVN QL GQDAWAHELSAPEKGCLI+AK++ FS+ QTYFNEAVIFLAS+DE GSAGFILNRPTS++LGDL+EG+ L F+++PLYLGGDV G+ + H P PDRL+ P V IGG+V+EA+RMVA+G AK DDF+F LHLCGWAPGQLE EI+RGVW P ATS+NV I+KHCL LPVP+WREVM LMGPK+GLLARDTYDDL
Sbjct: 11 DRGEEEHEEGDTVFLPTGDNKDFRLFRAKLRAGSDEKWKEQLRRNVNVGQLAGQDAWAHELSAPEKGCLIIAKSTQFSMAQTYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKSPLYLGGDVVSSRKQGQIDCSTSHESSRLPPSTVVFAAPLSPDRLS-----APQVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVSCKNNWRQVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 285
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A0A836C8M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M7_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.370e-66 Identity = 115/230 (50.00%), Postives = 153/230 (66.52%), Query Frame = 2
Query: 188 DVRLFRAKLRAGSEHNWQQQLRRNVNTLQLGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTYDDL 877
D R FRAKL AGSE W ++L+RNVN +L + WAHEL+APE GCL++A F+ ++ +++AVIFL H+ GS GF+LNRPT +G + G + +F PL GGD+G G VQ++H F +R+ A +II GV +GG V +A VA G AK DF+FFL L G APG L++E++ G W AATS +I+K C+ LPVPLWREV+ LMG K +L R TY DL
Sbjct: 74 DWRRFRAKLIAGSEEAWHERLQRNVNP-RLKDVETWAHELAAPEPGCLLLASPDHFTGQESQYSQAVIFLVQHNANGSVGFVLNRPTQFTIGTVTTG--MEVFNACPLMWGGDLGRGTVQMVHAFDAERMPGARKIIDGVYVGGGVLDAQEAVARGQAKPGDFKFFLQLFGKAPGHLQAEMDAGKWICAATSKELILKPCINLPVPLWREVLTLMGGKHSILGRLTYGDL 300
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: C1MN92_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MN92_MICPC) HSP 1 Score: 187 bits (476), Expect = 9.110e-51 Identity = 93/201 (46.27%), Postives = 123/201 (61.19%), Query Frame = 2
Query: 272 QLGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTYDD 874
+L + WAH + APEKGCL++A F + Q YF++AVI + H E GS G ILNRPT +G + D+ P F N LY GGDVG+G V +H G +A E++PGV +GG + A +V G K DF+FF CGWAPGQLESE ERGVW+P A S + +K + LP PLWREVM L G + ++ +Y +
Sbjct: 164 ELASETPWAHVIGAPEKGCLLLASEEEFKLGQQYFHQAVILVLEHHEKGSMGVILNRPTQYNMGYVGGDDSSP-FANNQLYFGGDVGDGTVSFLH--GSSEVAGGSEVLPGVYLGG-YDSACELVKDGTLKPTDFKFFARYCGWAPGQLESECERGVWYPVACSRQLALKQVIQLPKPLWREVMELCGGELRQTSKRSYGE 360
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: K8EAP8_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EAP8_9CHLO) HSP 1 Score: 187 bits (474), Expect = 1.520e-50 Identity = 95/198 (47.98%), Postives = 121/198 (61.11%), Query Frame = 2
Query: 275 LGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTY 868
L AWAH ++ PEKG LIVA T F +Q YFN+ VI L H + GS G ILNRPT ++ D++ + P F EN LY GGDVG+G V +H G +A+A E+ PGV IGG +A R+V G +F+FF CGWAPGQLE E RGVW+P A S + +K + LP PLWREV+ L G + L A+ Y
Sbjct: 158 LAKDKAWAHVIAKPEKGSLIVAATDDFVTSQQYFNQCVILLLEHSKDGSMGVILNRPTMYKMADVVNDENGP-FSENALYFGGDVGDGTVSFLH--GSPDVADAEEVSPGVFIGG-FNDAGRLVKEGKKDPREFKFFARYCGWAPGQLEDECARGVWYPVACSRQIALKPVIALPKPLWREVLELCGGELALKAKRAY 351
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A0A1Y5IDK1_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IDK1_OSTTA) HSP 1 Score: 185 bits (470), Expect = 2.150e-50 Identity = 113/292 (38.70%), Postives = 156/292 (53.42%), Query Frame = 2
Query: 44 GSEVNHPRGGAEQDAVHAA---GADRARDKEDKGGEEEDGETVFLPTGAGNDVRLFRAKLRAGSEHNWQQQL-----RRNVNTLQ-----LGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAK--KDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTYDD 874
G+ RG VH DR R ED G+ +D + +D R FRA+L A ++ N+ L+ L WAH ++APEKGCL+VA F ++Q YF++AVI + H E GS G ILNRPT +G + G+ F EN LY GGDVG+G V +H G + + ++E++PGV +GG E A +V G+ D+F+FF CGWAPGQLESE ERGVW+P A + + +K + LP PLWRE++ L G + +A Y D
Sbjct: 22 GARAGRMRGRLRGGTVHGRRWRATDRPRAMEDGRGDGDD-----VAPALESDWREFRARLLAREREATPEERASAISEENMKVLEAQNPRLAQAKPWAHVIAAPEKGCLLVAADQEFRMSQQYFHQAVILVLEHHENGSMGIILNRPTQYNMG-YVSGEPSGPFAENALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGVYLGG-YESACELVQQDGSTCHPDEFKFFARYCGWAPGQLESECERGVWYPIAAAKELSLKQVIQLPKPLWREILELCGGELADIAARAYQD 304
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A4S673_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S673_OSTLU) HSP 1 Score: 181 bits (458), Expect = 4.840e-49 Identity = 98/224 (43.75%), Postives = 133/224 (59.38%), Query Frame = 2
Query: 203 RAKLRAGSEHNWQQQLRRNVNTLQLGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAK--KDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTY 868
RA+ A SE N + +N L WAH + APEKGCL+VA F ++Q YF++AVI + H E GS G ILNRPT +G + G+ F +N LY GGDVG+G V +H G + + ++E++PGV +GG + A +V G+ D+F+FF CGWAPGQLESE ERGVWFP A + + +K + LP PLWRE+ L G + +AR Y
Sbjct: 49 RARAAAVSEENLKVLETQNPR---LAASAPWAHVIGAPEKGCLLVAADHEFRMSQQYFHQAVILVLEHHENGSMGVILNRPTQYDMG-YVSGEANGPFAKNALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGVYLGG-YDSACELVQQDGSTCHADEFKFFARYCGWAPGQLESECERGVWFPVAAAKELSLKQVIQLPKPLWREISELCGGELEEMARKAY 265
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A0A7S0PMA6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PMA6_9CHLO) HSP 1 Score: 181 bits (459), Expect = 7.720e-49 Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 2
Query: 185 NDVRLFRAKLRAGSEHNWQQQLR--------RNVNTLQ-----LGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWRE 817
+D R FRAKL A ++ ++ R N+ L+ L WAH ++APEKGCL+VA F ++Q YF++AVI + H E GS G ILNRPT +G + GD +F +N LY GGDVG+G V +H G + + ++E++PG+ +GG + A +V GAK D+F+FF CGWAPGQLESE ERGVWFP A + + +K + LP PLWRE
Sbjct: 98 SDWREFRAKLLAQEKNVKLEEERARAMAASGENLKVLEAQNPKLASAAPWAHVIAAPEKGCLLVAADHEFRMSQQYFHQAVILVLEHHENGSMGVILNRPTQYDMG-YVSGDVDGVFAKNALYFGGDVGDGTVSFLH--GREDVKGSVEVLPGMYLGG-YDSACALVEEQGAKPDEFKFFARYCGWAPGQLESECERGVWFPVAGAKELALKQVIQLPKPLWRE 317
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A0A7S0D198_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D198_MICPS) HSP 1 Score: 182 bits (463), Expect = 1.360e-48 Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 2
Query: 275 LGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTYDD 874
L + WAH + APE+GCL+VA+ F+ Q YF++AVI + H+E GS G ILNRPT +G + GD F +N LY GGDVG+G V +H G + ++E+ GV +GG E A +V TG + +D +FF CGW PGQL+SE ERGVW+P A S + +K + LP PLWREV L+G G +R Y +
Sbjct: 181 LAAEKPWAHVIGAPERGCLLVARGDNFTQGQQYFHQAVILMLEHNEKGSMGVILNRPTQYSMG-YVSGDESGPFAQNALYFGGDVGDGTVSFLH--GSSSVTGSVEVSAGVFLGG-YESACELVKTGEVEANDCKFFARYCGWGPGQLQSECERGVWYPVACSKQIALKQVIQLPKPLWREVSELVGGDVGYESRKAYGE 376
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Match: A0A5J4XP12_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XP12_9CHLO) HSP 1 Score: 177 bits (449), Expect = 3.430e-47 Identity = 98/229 (42.79%), Postives = 136/229 (59.39%), Query Frame = 2
Query: 188 DVRLFRAKLRAGSEHNWQQQLRRNVNTLQLGGQDAWAHELSAPEKGCLIVAKTSVFSVTQTYFNEAVIFLASHDETGSAGFILNRPTSMRLGDLLEGDTL-PLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPGVCIGGSVEEANRMVATGGAKKDDFRFFLHLCGWAPGQLESEIERGVWFPAATSSNVIMKHCLGLPVPLWREVMNLMGPKFGLLARDTYD 871
D R FRA+L AG + V+T G+ WAH++ PEKGCL++A +F +Q YF++AVIFL HD+T SAGFILN+PT LG L+ D L P F +N LYLGGDVG + +H + + A+E++ GV +GG EEA + TG + D FR+F GW PGQLE+E GVWF AA SS+VI+ H +W ++ +MG + L+++ D
Sbjct: 108 DWREFRARLVAGDRGQ-----QGEVSTSTANGR--WAHDVGKPEKGCLLLAHPLMFGSSQGYFSQAVIFLFEHDDTASAGFILNKPTEHVLGKLVGADNLCPEFADNVLYLGGDVGHDTMHFLHGY--SDIQGAVEVVQGVFMGG-FEEARFGIRTGSKQSDQFRWFNRYAGWGPGQLEAECVAGVWFTAAASSHVILNHQNLSGREMWHTILEMMGGDYAALSKNVRD 326 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig876.20120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig876.20120.1 >prot_F-serratus_M_contig876.20120.1 ID=prot_F-serratus_M_contig876.20120.1|Name=mRNA_F-serratus_M_contig876.20120.1|organism=Fucus serratus male|type=polypeptide|length=143bp MRLGDLLEGDTLPLFRENPLYLGGDVGEGNVQIIHPFGPDRLANAMEIIPback to top mRNA from alignment at F-serratus_M_contig876:212416..222871+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig876.20120.1 ID=mRNA_F-serratus_M_contig876.20120.1|Name=mRNA_F-serratus_M_contig876.20120.1|organism=Fucus serratus male|type=mRNA|length=10456bp|location=Sequence derived from alignment at F-serratus_M_contig876:212416..222871+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig876:212416..222871+ >mRNA_F-serratus_M_contig876.20120.1 ID=mRNA_F-serratus_M_contig876.20120.1|Name=mRNA_F-serratus_M_contig876.20120.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig876:212416..222871+ (Fucus serratus male)back to top |