mRNA_F-serratus_M_contig875.20112.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A6H5KT91_9PHAE (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT91_9PHAE) HSP 1 Score: 144 bits (363), Expect = 9.960e-33 Identity = 69/79 (87.34%), Postives = 77/79 (97.47%), Query Frame = 3
Query: 252 QMRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
QMRTCGEEVKARGA+L V+TDNP+LA+GLD +PIVIPNNGALTALIAVLPLQFIAYEL++A+GINPDTPRNLAKAVTTD
Sbjct: 702 QMRTCGEEVKARGAQLTVITDNPRLADGLDPNPIVIPNNGALTALIAVLPLQFIAYELSLAKGINPDTPRNLAKAVTTD 780
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A482SH71_9ARCH (Glutamine--fructose-6-phosphate transaminase (isomerizing) (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH71_9ARCH) HSP 1 Score: 132 bits (333), Expect = 2.290e-31 Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EEVKARGA++IV+TDNPKLA+G+DS P+VIPNNG LTALIAVLPLQ IAYELA+ RGINPD PRNLAKAVTTD
Sbjct: 198 MRTAAEEVKARGAQVIVITDNPKLAQGIDSDPLVIPNNGPLTALIAVLPLQLIAYELALLRGINPDVPRNLAKAVTTD 275
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A812XAJ1_SYMMI (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XAJ1_SYMMI) HSP 1 Score: 125 bits (313), Expect = 5.190e-30 Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EE+KARG ++ V+TDNPKLA+GLD +P+VIP+NG LTALIAVLPLQ IAYELAV +GINPD PRNLAKAVT D
Sbjct: 76 MRTAAEEIKARGGQVYVITDNPKLADGLDENPVVIPSNGPLTALIAVLPLQLIAYELAVLKGINPDVPRNLAKAVTVD 153
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A6U2WZ89_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2WZ89_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.860e-28 Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EEV+ARGA++I++TD P+LA LD +PI+IPNNG LTAL AVLPLQ IAYELA+ RGINPDTPRNLAKAVT D
Sbjct: 78 MRTAAEEVRARGAQVIIITDKPELARDLDDNPIIIPNNGPLTALGAVLPLQLIAYELAMIRGINPDTPRNLAKAVTVD 155
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A7S1ZTX7_TRICV (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZTX7_TRICV) HSP 1 Score: 121 bits (304), Expect = 5.320e-27 Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EEVKARGA++I++TD P LA+GLD SPIVIP NG +TAL AVLP+Q IAYELA+ +GINPDTPRNLAKAVT D
Sbjct: 238 MRTAAEEVKARGAQVIIITDKPSLADGLDDSPIVIPQNGPMTALGAVLPMQLIAYELAMIKGINPDTPRNLAKAVTVD 315
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A7S2R8P1_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8P1_9STRA) HSP 1 Score: 125 bits (315), Expect = 8.800e-27 Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = 3
Query: 252 QMRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
QMR EEVKARGAE ++TDNPKLA+GLD P+VIP NG LTAL AVLPLQF+AYELAV RGINPD PRNLAKAVT D
Sbjct: 583 QMRIVAEEVKARGAECFIITDNPKLADGLDPDPLVIPRNGPLTALTAVLPLQFLAYELAVLRGINPDVPRNLAKAVTVD 661
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A7S0B1M1_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B1M1_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.800e-26 Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EEVKARGAE+I++TD LAEGLD PI++P+NG LT+L AVLPLQ IAYELA+ RGINPDTPRNLAKAVT D
Sbjct: 243 MRTAAEEVKARGAEVIIITDKASLAEGLDDDPILVPSNGPLTSLGAVLPLQLIAYELAMLRGINPDTPRNLAKAVTVD 320
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A7S2SCR2_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCR2_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.330e-26 Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EEVKARGA++I++TD LAEGLD P+VIP+NG LTAL AVLP+Q +A+ELA+ R INPDTPRNLAKAVT D
Sbjct: 102 MRTAAEEVKARGADVIIITDKKSLAEGLDDDPLVIPSNGPLTALGAVLPIQLLAFELAMLRNINPDTPRNLAKAVTVD 179
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A6H5L0K1_9PHAE (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K1_9PHAE) HSP 1 Score: 115 bits (289), Expect = 4.980e-26 Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 3
Query: 252 QMRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAK 473
QMRT G EVKARGA++I++TD P LAEGLD PIVIP+N LTALI VLPLQ IAYELA+ +GINPDTPRNLAK
Sbjct: 110 QMRTAGMEVKARGADVIIITDKPALAEGLDEDPIVIPSNDRLTALIGVLPLQLIAYELALLKGINPDTPRNLAK 183
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Match: A0A7S1YXA5_TRICV (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXA5_TRICV) HSP 1 Score: 119 bits (298), Expect = 6.220e-26 Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 3
Query: 255 MRTCGEEVKARGAELIVVTDNPKLAEGLDSSPIVIPNNGALTALIAVLPLQFIAYELAVARGINPDTPRNLAKAVTTD 488
MRT EEVKARGA++IV+TD LAEGLD PI+IP+NG +TAL AVLP+Q IAYELA+ RGINPDTPRNLAKAVT D
Sbjct: 269 MRTAAEEVKARGAKVIVITDKESLAEGLDDDPIIIPSNGPMTALGAVLPMQLIAYELAMLRGINPDTPRNLAKAVTVD 346 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig875.20112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig875.20112.1 >prot_F-serratus_M_contig875.20112.1 ID=prot_F-serratus_M_contig875.20112.1|Name=mRNA_F-serratus_M_contig875.20112.1|organism=Fucus serratus male|type=polypeptide|length=148bp MFRMDKIRADMNKKVARPEGDVDVPELRKDAALREMAAYMKEEAPNNDSKback to top mRNA from alignment at F-serratus_M_contig875:299371..302389- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig875.20112.1 ID=mRNA_F-serratus_M_contig875.20112.1|Name=mRNA_F-serratus_M_contig875.20112.1|organism=Fucus serratus male|type=mRNA|length=3019bp|location=Sequence derived from alignment at F-serratus_M_contig875:299371..302389- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig875:299371..302389- >mRNA_F-serratus_M_contig875.20112.1 ID=mRNA_F-serratus_M_contig875.20112.1|Name=mRNA_F-serratus_M_contig875.20112.1|organism=Fucus serratus male|type=CDS|length=888bp|location=Sequence derived from alignment at F-serratus_M_contig875:299371..302389- (Fucus serratus male)back to top |