prot_F-serratus_M_contig875.20109.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig875.20109.1
Unique Nameprot_F-serratus_M_contig875.20109.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length87
Homology
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BLAST of mRNA_F-serratus_M_contig875.20109.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 2.490e-8
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:    1 MQEIAVPGRIKLVEKAINDSEGAIRIPAGWKDALYYV-LGTG-GPAET 46
            MQEIAVPG IK+ E AI DS+G +  P GWKDALYY  LGTG  P +T
Sbjct:   77 MQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQT 124
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig875.20109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV02_ECTSI2.490e-864.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig875contigF-serratus_M_contig875:217249..217509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig875.20109.1mRNA_F-serratus_M_contig875.20109.1Fucus serratus malemRNAF-serratus_M_contig875 216970..217625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig875.20109.1 ID=prot_F-serratus_M_contig875.20109.1|Name=mRNA_F-serratus_M_contig875.20109.1|organism=Fucus serratus male|type=polypeptide|length=87bp
MQEIAVPGRIKLVEKAINDSEGAIRIPAGWKDALYYVLGTGGPAETCAFH
VAVTRLLVYISALTLSPCLLVVGVIAVAHTAVLHDE*
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