mRNA_F-serratus_M_contig875.20107.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: A0A6H5JP49_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP49_9PHAE) HSP 1 Score: 119 bits (299), Expect = 7.290e-32 Identity = 56/67 (83.58%), Postives = 60/67 (89.55%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
QLLWGGI IPR+LIVVGAGVIGMEYACMINV+PGTTVTV+DPRP VL FAD DVIE+LQY MRQ G
Sbjct: 139 QLLWGGITHIPRDLIVVGAGVIGMEYACMINVVPGTTVTVIDPRPTVLSFADNDVIENLQYTMRQNG 205
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: D7FHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH4_ECTSI) HSP 1 Score: 119 bits (299), Expect = 4.570e-30 Identity = 56/67 (83.58%), Postives = 60/67 (89.55%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
QLLWGGI IPR+LIVVGAGVIGMEYACMINV+PGTTVTV+DPRP VL FAD DVIE+LQY MRQ G
Sbjct: 172 QLLWGGITHIPRDLIVVGAGVIGMEYACMINVVPGTTVTVIDPRPTVLSFADNDVIENLQYTMRQNG 238
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: A0A7S3XQA5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQA5_HETAK) HSP 1 Score: 105 bits (261), Expect = 1.400e-27 Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
Q+LWGG++++PR+LIVVGAGVIGMEYA MINV+PGT VT+VDPR VL F DG++++SL Y MR +G
Sbjct: 48 QILWGGVREVPRDLIVVGAGVIGMEYASMINVVPGTVVTIVDPRTSVLGFVDGEIVDSLMYQMRLRG 114
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: W7TS12_9STRA (Soluble pyridine nucleotide transhydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TS12_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.150e-26 Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
QLLWGGI ++PR+ IVVGAGVIG+EYA MINV+PGT VT++DPRP +L FAD +V+++L Y+MR G
Sbjct: 28 QLLWGGIDRVPRSFIVVGAGVIGIEYASMINVLPGTNVTIIDPRPSLLGFADREVVDALMYSMRHYG 94
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI) HSP 1 Score: 103 bits (258), Expect = 3.120e-24 Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
QLLWGG+ ++PR+LIVVGAGVIGMEYA MINVIPGTTVTV+DPR +VL FAD +V ++L Y+MR+ G
Sbjct: 224 QLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNG 290
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: A0A4D9CNB1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNB1_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.570e-23 Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
QLLWGGI ++PR+ IVVGAGVIG+EYA MINV+PGT VT++DPRP++L FAD +V+++L Y+MR G
Sbjct: 243 QLLWGGIDRVPRSFIVVGAGVIGIEYASMINVLPGTNVTIIDPRPNLLGFADREVVDALMYSMRHYG 309
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 9.540e-23 Identity = 43/67 (64.18%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
QLLWGG++ +PR L+VVGAGVIGMEYA M+N+IPGT VTV+DPR +L FAD +V+++L Y+MR +G
Sbjct: 249 QLLWGGVRDVPRELMVVGAGVIGMEYASMMNIIPGTNVTVIDPRDKMLGFADTEVVQALMYSMRTKG 315
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: W7TTE2_9STRA (Soluble pyridine nucleotide transhydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE2_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.520e-22 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
LL G ++++PR LIVVGAGVIGMEYA M NVIPGT VTV+D RPDVL FAD ++I+SL+Y MRQ+G
Sbjct: 259 DLLSGSLQRVPRELIVVGAGVIGMEYASMFNVIPGTRVTVIDGRPDVLTFADKEIIQSLEYEMRQKG 325
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: F0VZ15_9STRA (Soluble pyridine nucleotide transhydrogenase putative n=2 Tax=Albugo TaxID=65356 RepID=F0VZ15_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.130e-21 Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
Q+LWGG+K +P+ LIVVGAGVIGMEYA M+++IPG VTV+D R ++L AD +V+E+L YAMRQ G
Sbjct: 235 QILWGGVKSVPKRLIVVGAGVIGMEYASMMSIIPGAQVTVIDGRKEILEMADREVVEALTYAMRQTG 301
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Match: A0A8K1C723_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C723_PYTOL) HSP 1 Score: 95.5 bits (236), Expect = 2.920e-21 Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFADGDVIESLQYAMRQQG 201
Q+LWGGI+ +P+ LIVVGAGVIGMEYA M+++IPGT VTV+D R ++L AD +V E+L YAMRQ G
Sbjct: 230 QILWGGIQSVPKRLIVVGAGVIGMEYASMMSIIPGTEVTVIDGRKEILDMADKEVTEALSYAMRQTG 296 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig875.20107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig875.20107.1 >prot_F-serratus_M_contig875.20107.1 ID=prot_F-serratus_M_contig875.20107.1|Name=mRNA_F-serratus_M_contig875.20107.1|organism=Fucus serratus male|type=polypeptide|length=76bp QLLWGGIKQIPRNLIVVGAGVIGMEYACMINVIPGTTVTVVDPRPDVLPFback to top mRNA from alignment at F-serratus_M_contig875:6841..7936+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig875.20107.1 ID=mRNA_F-serratus_M_contig875.20107.1|Name=mRNA_F-serratus_M_contig875.20107.1|organism=Fucus serratus male|type=mRNA|length=1096bp|location=Sequence derived from alignment at F-serratus_M_contig875:6841..7936+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig875:6841..7936+ >mRNA_F-serratus_M_contig875.20107.1 ID=mRNA_F-serratus_M_contig875.20107.1|Name=mRNA_F-serratus_M_contig875.20107.1|organism=Fucus serratus male|type=CDS|length=456bp|location=Sequence derived from alignment at F-serratus_M_contig875:6841..7936+ (Fucus serratus male)back to top |