prot_F-serratus_M_contig875.20114.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig875.20114.1
Unique Nameprot_F-serratus_M_contig875.20114.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length226
Homology
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BLAST of mRNA_F-serratus_M_contig875.20114.1 vs. uniprot
Match: A0A836CM66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM66_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.700e-16
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0 
Query:    1 MSIRNALCAPCDKNPQKAIAYAWFTSIVMVVVAFICACAAAGKSGG----DGSASLGFAAVWT 59
            M IR+ +CAPC +NPQKAIAYAWFTSI++V +AF+CAC AA K  G     GS SL FA++WT
Sbjct:    1 MGIRDNVCAPCARNPQKAIAYAWFTSIILVAIAFVCACVAASKQEGVDAVKGSKSLAFASIWT 63
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BLAST of mRNA_F-serratus_M_contig875.20114.1 vs. uniprot
Match: D7FUW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW1_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 5.410e-5
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   29 MVVVAFICACAAAGKSGGDGSASLGFAAVWT 59
            MV+VAFICACA+A  S GDGSASLGFAAVWT
Sbjct:    1 MVMVAFICACASAAHSDGDGSASLGFAAVWT 31
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig875.20114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CM66_9STRA2.700e-1661.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FUW1_ECTSI5.410e-583.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..53
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig875contigF-serratus_M_contig875:318402..324508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig875.20114.1mRNA_F-serratus_M_contig875.20114.1Fucus serratus malemRNAF-serratus_M_contig875 318402..328843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig875.20114.1 ID=prot_F-serratus_M_contig875.20114.1|Name=mRNA_F-serratus_M_contig875.20114.1|organism=Fucus serratus male|type=polypeptide|length=226bp
MSIRNALCAPCDKNPQKAIAYAWFTSIVMVVVAFICACAAAGKSGGDGSA
SLGFAAVWTTTTAATCGGGVLATGGGALIYLHRKCQHSYAEGKGLTADLK
LAAEERSGLCAENERLHAKADVLREELNRAQGSVLKLEAMVADGQSRTSE
AETLLAAAREKLLLVESRAREILTRKEKEWETRMDTAASDALKQASTSAA
ALVTAQTAAQQREGDLKEGLRALDDR
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