prot_F-serratus_M_contig873.20104.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig873.20104.1
Unique Nameprot_F-serratus_M_contig873.20104.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length238
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig873.20104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..237
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 214..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig873contigF-serratus_M_contig873:295337..298625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig873.20104.1mRNA_F-serratus_M_contig873.20104.1Fucus serratus malemRNAF-serratus_M_contig873 295220..300813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig873.20104.1 ID=prot_F-serratus_M_contig873.20104.1|Name=mRNA_F-serratus_M_contig873.20104.1|organism=Fucus serratus male|type=polypeptide|length=238bp
MCKIFHVLLIVLHPYMFCLSASFLFCAVANCFCLRRSLCPNITHALSIIY
LRNLSYFILIIDTARSTLFPQKSSIVNSERKALTFEAVESSFFVRVLAFT
VACNDQPSTINLEPVQAPPAKTVLHHKGFHHTDTGDVPEEARHHVHPGYH
HRSGEEKVKGGWRHQDRQWHGHLQLKQLGTRFSLGRSKARERKLMIDKYA
RKEIHKVEFTDSNAGGVWMALGFVSLVFCLVVGNFQP*
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