mRNA_F-serratus_M_contig872.20097.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: A0A6H5LIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIB2_9PHAE) HSP 1 Score: 206 bits (525), Expect = 8.580e-59 Identity = 115/195 (58.97%), Postives = 137/195 (70.26%), Query Frame = 1
Query: 1 SVEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSD-LGEKLK---------------------------------------LKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVFT 465
SVEPYLLEKSRVL+QGEGERNFHILY+LVAGA+Q L ++LK L+ + Y ILS+SGC LEG++DADRFKAIQDAFTTVGV+ +AQ+QVW+ALS VLHLS L+ EADH+EGPVAAI+D+ TL+ VAS+LGVE + LE+MLTLKVVPVTRGEVFT
Sbjct: 235 SVEPYLLEKSRVLAQGEGERNFHILYELVAGAVQDGALAKELKVQCARPPAAAVLVLRMKTRRIVQRQGHIECVLRDEDLFVLENATNYRILSASGCITLEGVEDADRFKAIQDAFTTVGVEEDAQMQVWKALSAVLHLSTLEFHEADHQEGPVAAISDKTTLANVASLLGVEEKTLEDMLTLKVVPVTRGEVFT 429
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.680e-47 Identity = 91/154 (59.09%), Postives = 116/154 (75.32%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVFT 465
+E YLLEKSRVL+QG+GERNFHILY LVAGA S +G LKL+ V Y ILS S CT L+ +DDA F+ ++ AF T+G+ E+QLQVWQ L+ VLHLS ++ ++ DHE+G +A I+DRE LST+A++L VE LE MLT +VV VTRGE FT
Sbjct: 231 IETYLLEKSRVLTQGKGERNFHILYQLVAGA--SGVGIDLKLQDVESYKILSQSDCTTLDDVDDAAEFRTVKGAFDTIGMGEESQLQVWQMLASVLHLSNVEFDKVDHEQGEIATISDREALSTLAALLAVEESALEAMLTQRVV-VTRGETFT 381
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: A0A6H5JUQ2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ2_9PHAE) HSP 1 Score: 165 bits (417), Expect = 2.240e-46 Identity = 86/153 (56.21%), Postives = 112/153 (73.20%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVF 462
+E YLLEKSRVL+ G GERNFH+LY LVAGA S L LKL+GV Y ILS CT L+G+DDA+ F+ ++ AF T+G+ E+QLQVWQ L+ +LHLS L+ + DH++G +A I+D ETLST+A +LGV L +MLT +V+ VTRGE F
Sbjct: 246 IETYLLEKSRVLTPGMGERNFHVLYQLVAGA--SGLALNLKLEGVGSYKILSRGDCTALDGVDDANEFRGVRAAFDTIGMSEESQLQVWQMLAAMLHLSNLEFNKVDHQQGEIADISDSETLSTLARLLGVGEGALGKMLTQRVI-VTRGETF 395
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 171 bits (432), Expect = 2.740e-46 Identity = 87/153 (56.86%), Postives = 115/153 (75.16%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVF 462
+E YLLEKSRVL+QG+GERNFHILY+LVAG S L +LKL Y IL +GC L+G+DD +F+ +Q AF T+G+D + QLQVW+AL+ VLH+S L+ ++AD E+G +AAI+DR L+T+AS+LGVE LE+MLT +VV TR EVF
Sbjct: 253 IETYLLEKSRVLTQGKGERNFHILYELVAGGAASGLATELKLGSAETYKILGENGCITLDGVDDVKQFQNVQKAFDTIGMDKDTQLQVWKALAAVLHMSNLRFDKADSEQGEIAAISDRGALATLASLLGVEEAVLEKMLTQRVVQ-TRVEVF 404
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 170 bits (430), Expect = 5.090e-46 Identity = 89/154 (57.79%), Postives = 114/154 (74.03%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVFT 465
+E YLLEKSRVL+ G GERNFH+LY LVAGA SDLG LKL+GV Y ILS CT L+G+DDA+ FK ++ AF T+ + E+QLQVWQ L+ +LHLS L+ + DH++G +A I+D ETLST+A +LGV L +MLT +VV +TRGE FT
Sbjct: 247 IETYLLEKSRVLTPGMGERNFHVLYQLVAGA--SDLGLDLKLEGVGSYKILSHGDCTALDGVDDANEFKGVRAAFDTIRMSEESQLQVWQTLAAMLHLSNLEFNKVDHQQGEIADISDSETLSTLARLLGVGEGALGKMLTQRVV-ITRGETFT 397
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE) HSP 1 Score: 165 bits (417), Expect = 2.850e-44 Identity = 86/154 (55.84%), Postives = 113/154 (73.38%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVFT 465
+E YLLEKSRVL+QG GERNFHILY LVAGA S L + LKL+ V Y IL+ S C L+ +DD + F ++ AF T+G+ +E+Q QVW+ L+ VLH+S L+ ++ DHE+G +A+I+DRE LST+A+ L VE LE MLT +VV VTRGE FT
Sbjct: 245 IETYLLEKSRVLTQGTGERNFHILYQLVAGA--SALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFATVKSAFDTIGMSAESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALSTLAAFLAVEESALEAMLTQRVV-VTRGETFT 395
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 163 bits (412), Expect = 1.350e-43 Identity = 86/154 (55.84%), Postives = 112/154 (72.73%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVFT 465
+E YLLEKSRVL+QG GERNFHILY LVAGA S L + LKL+ V Y IL+ S C L+ +DD + F ++ AF T+G+ E+Q QVW+ L+ VLH+S L+ ++ DHE+G +A+I+DRE LST+A+ L VE LE MLT +VV VTRGE FT
Sbjct: 245 IETYLLEKSRVLTQGTGERNFHILYQLVAGA--SALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFGTVKSAFDTIGMSPESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALSTLAAFLAVEEGALEAMLTQRVV-VTRGETFT 395
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: A0A6H5JLA2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA2_9PHAE) HSP 1 Score: 143 bits (361), Expect = 2.320e-37 Identity = 80/171 (46.78%), Postives = 109/171 (63.74%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQV-----------------WQALSGVLHLSELQIEEADHEEGPVAAITDRETLSTVASMLGVEAQKLEEMLTLKVVPVTRGEVFT 465
+E YLLEKSRVL+Q +GERNFHILY+LV GA +S L + L+L+GV Y +LS+SGCT LEG+DDA F+ ++ A T+G+D + Q+QV W+AL+ VLH+S + E D +G VAA+ D L ++++LGVE LE MLT + V T E FT
Sbjct: 151 IETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQVRRRRGRWLVYVCDEQMVWKALAAVLHMSNVTFEGKDDAQGEVAAVKDPAALKKLSALLGVEPSLLEAMLTQREVK-TMAETFT 320
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.500e-29 Identity = 73/167 (43.71%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETL--------------STVASMLGVEAQKLEEMLTLKVVPVTRGEVF 462
+E YLLEKSRVLSQ GERNFHILY+LVAGA L +L L +Y ILS GC L+G+DDA +F+ + AF TVG+D+ Q QVW+ L+ VLH++ L + + EG VAA+ +A +LGV A+ + ++LT + + TRGE F
Sbjct: 236 METYLLEKSRVLSQARGERNFHILYELVAGA-DPALKRQLGLGSAQDYHILSQGGCIALDGVDDAAQFRDVVHAFGTVGLDAATQGQVWRLLAAVLHVACLAFDVEETAEGEVAAVPKEXXXXXXXXXXXXXXXXXQLIAELLGVSARDVSDLLTTRTMT-TRGETF 400
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.460e-27 Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 4 VEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSILSSSGCTVLEGIDDADRFKAIQDAFTTVGVDSEAQLQVWQALSGVLHLSELQIEEADHEEGPVAAITDRETLST-------------------------------VASMLGVEAQKLEEMLTLKVVPVTRGEVF 462
+E YLLEKSRVLSQ + ERNFHILY+LVAGA L ++L L +Y IL SGCT LEG+DDA++F+ + AF TVG+ +E Q QVW+ L+ VLH + ++ + EG VA + ++ +A +LGV A + ++LT + + T GE F
Sbjct: 252 METYLLEKSRVLSQAQNERNFHILYELVAGA-DPALKKRLGLGSAKDYHILFQSGCTTLEGVDDAEQFRGVVHAFNTVGLTAEVQEQVWRMLAAVLHTACMKFAAEETAEGEVATVPQKDQEEEAAEASAAANCGAPCDVRTARVDMRDEGQGELIAELLGVTADDVSKLLTTRTMT-THGETF 433 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig872.20097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig872.20097.1 >prot_F-serratus_M_contig872.20097.1 ID=prot_F-serratus_M_contig872.20097.1|Name=mRNA_F-serratus_M_contig872.20097.1|organism=Fucus serratus male|type=polypeptide|length=155bp SVEPYLLEKSRVLSQGEGERNFHILYDLVAGALQSDLGEKLKLKGVSEYSback to top mRNA from alignment at F-serratus_M_contig872:244434..247533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig872.20097.1 ID=mRNA_F-serratus_M_contig872.20097.1|Name=mRNA_F-serratus_M_contig872.20097.1|organism=Fucus serratus male|type=mRNA|length=3100bp|location=Sequence derived from alignment at F-serratus_M_contig872:244434..247533- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig872:244434..247533- >mRNA_F-serratus_M_contig872.20097.1 ID=mRNA_F-serratus_M_contig872.20097.1|Name=mRNA_F-serratus_M_contig872.20097.1|organism=Fucus serratus male|type=CDS|length=930bp|location=Sequence derived from alignment at F-serratus_M_contig872:244434..247533- (Fucus serratus male)back to top |