prot_F-serratus_M_contig872.20090.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig872.20090.1
Unique Nameprot_F-serratus_M_contig872.20090.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length480
Homology
BLAST of mRNA_F-serratus_M_contig872.20090.1 vs. uniprot
Match: D7FJW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 3.560e-68
Identity = 168/462 (36.36%), Postives = 229/462 (49.57%), Query Frame = 0
Query:    8 EASFERPDQGAKGTRDFASPERCALVFGLFQSVEAVNTLGSIYKAQLLPELQILRLSVGDTVFEQWDYHSMVYVIVRGTVELKSTKAGVPFRVGKFGVGEVIGSPLAEKCQTTARCTDDSILIGLDGEHLKAIATSSRDAERMAKEAFLKDVAAMSLFSDSDLNVVGKLFKTCTLKENEVLCQEGTRANHLYVVKRGFFRLLKAFLPKASSTGDGIKDRASSEGPYSCGGR----------RLMHFELGEIGPKEMLGESGLFHNEAEASSGAVGTTARAKVPMSAATGEYEAGPLYPPSSASEVENNAEGRIYTPATPKSARVMQAASATRNMNVLSATNTPSPTRPKAGVK-----GDADPTAIFCSPSRPRQRK-------KGYHIVSAVASRGGAQVYVASIFDLKLLLRDLPNLRCFIDITRRVHEARAKCWDAQALAEQLREQIAWEGYKRKVISE 447
            EA  + P   +      ASPE  A+VF +F SV  V +L SIYK QL  E Q+   + G T+F QW++   + VI+RG V L S  +GV F+ G   VGEVIGS        TARC   + ++ L  +   A+   S  AER+AK+AFLK  A  S  +D DLN V  LF T TL +N+V+C+EG+R +H+YVVKRGF R+LKAFLP+                                 RL HF+LGEIGPK+MLGE+G+  +   +S  A  TT                    PP +A+E        +  PA   S    Q        ++   T TP  T            GDA P +   +  R    +       K  +I+SA AS G A+VYVA+++DLK L  D  + R      +R+H+ARA+ W  +ALA+QLR Q  W+  KR V+S+
Sbjct:   75 EADLDTPGS-SSDEATMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFREFQLRHFAAGSTIFRQWEHQDKICVILRGRVHLTSKHSGVLFQAGTCNVGEVIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEXXXXXXXXXXXXXXXXXXXXXXXXXXSADVETRLKHFDLGEIGPKDMLGENGMLKHLDTSS--AFSTT--------------------PPPAATET-------VALPAIASSQEDAQ--------HLSQPTETPGDTTDHGASTPDWDTGDASPPSADAATDRAGSSRVATIGPRKPAYIISAAASGGTAEVYVANVYDLKKLQTD--SFRYCWKTAQRLHQARAQAWGVEALAQQLRRQNEWDARKRGVLSQ 496          
BLAST of mRNA_F-serratus_M_contig872.20090.1 vs. uniprot
Match: A0A6H5KSV6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV6_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.680e-53
Identity = 158/457 (34.57%), Postives = 225/457 (49.23%), Query Frame = 0
Query:    1 MVQNGGTEASFERPDQGAKGTRDFASPERCALVFGLFQSVEAVNTLGSIYKAQLLPELQILRLSVGDTVFEQWDYHSMVYVIVRGTVELKSTKAGVPFRVGKFGVGEVIGSPLAEKCQTTARCTDDSILIGLDGEHLKAIATSSRDAERMAKEAFLKDVAAMSLFSDSDLNVVGKLFKTCTLKENEVLCQEGTRANHLYVVKRGFFRLLKAFLPKASST-GDGIKDRASSEGPYSCGGRR---------LMHFELGEIGPKEMLGESGLFHNEAEASSGAVGTTARAKVPMSAATGEYEAGPLYPPSSASEVENNAEGRIYTPATPKSARVMQAASATRNMNVLSATNTPSPTRPKAGVKGDADPTAIFCSPSRPRQRKKGYHIVSAVASRGGAQVYVASIFDLKLLLRDLPNLRCFIDITRRVHEARAKCWDAQALAEQLREQIAWEGYKRKVISE 447
            +VQ    EA  + P   +  T   ASPE  A+VF +F SV  V +L SIYK QL  EL++   + G T+F QW++ +                             +VIGS        TARC   + ++ L  +   A+   S  AER+AK+AFLK  A  S  +D DLN V  LF   TL +N+V+C EG+R +H+YVVKRGF R+LKAFLP+  +    G    AS+    +   RR         L +F+LGEIGPK+MLGE+G+  +    +S  + TT     P  AAT          P+ AS  E   + +  +  T   A  +   ++T + +   A    SP    A   G   P        +P       +I+SA AS G A+VYVA+++DLK L  D     C+    +R+H+ARA+ W A ALA+QLR +  WE  K +V+S+
Sbjct:   61 IVQRHIREADPDTPGSSSDETT-MASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFRELRLKHFATGSTIFRQWEHQN-----------------------------KVIGSIKPIVGMLTARCETYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTAITLHDNQVICMEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPSHASTVAAGAASARRSSLADVETRLKYFDLGEIGPKDMLGENGMLKHLD--TSLVLSTT-----PAPAATESVTL-----PAIASSQE---DAQHLSQPTDARADTIDHGASTLDGDAGDA----SPPSADAATDGAGSPRVATMGLRKPA------YIISAAASGGTAEVYVANVYDLKKLQTD-SFCYCW-KTAQRLHQARAQAWGAGALAQQLRRRNEWEARKGEVLSQ 460          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig872.20090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJW3_ECTSI3.560e-6836.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSV6_9PHAE1.680e-5334.57Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 414..434
NoneNo IPR availablePANTHERPTHR23011UNCHARACTERIZEDcoord: 116..455
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 152..280
e-value: 1.3E-10
score: 42.9
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 36..151
e-value: 6.5E-10
score: 41.3
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 42..110
score: 9.73
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 152..264
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 31..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig872contigF-serratus_M_contig872:87832..90180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig872.20090.1mRNA_F-serratus_M_contig872.20090.1Fucus serratus malemRNAF-serratus_M_contig872 87723..90556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig872.20090.1 ID=prot_F-serratus_M_contig872.20090.1|Name=mRNA_F-serratus_M_contig872.20090.1|organism=Fucus serratus male|type=polypeptide|length=480bp
MVQNGGTEASFERPDQGAKGTRDFASPERCALVFGLFQSVEAVNTLGSIY
KAQLLPELQILRLSVGDTVFEQWDYHSMVYVIVRGTVELKSTKAGVPFRV
GKFGVGEVIGSPLAEKCQTTARCTDDSILIGLDGEHLKAIATSSRDAERM
AKEAFLKDVAAMSLFSDSDLNVVGKLFKTCTLKENEVLCQEGTRANHLYV
VKRGFFRLLKAFLPKASSTGDGIKDRASSEGPYSCGGRRLMHFELGEIGP
KEMLGESGLFHNEAEASSGAVGTTARAKVPMSAATGEYEAGPLYPPSSAS
EVENNAEGRIYTPATPKSARVMQAASATRNMNVLSATNTPSPTRPKAGVK
GDADPTAIFCSPSRPRQRKKGYHIVSAVASRGGAQVYVASIFDLKLLLRD
LPNLRCFIDITRRVHEARAKCWDAQALAEQLREQIAWEGYKRKVISETVR
LDRLKHIMGSSGIGCSVHRWGGSGDDIDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like