mRNA_F-serratus_M_contig8716.20086.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI) HSP 1 Score: 301 bits (771), Expect = 8.560e-101 Identity = 141/225 (62.67%), Postives = 179/225 (79.56%), Query Frame = 1
Query: 1 LYFGVWIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQAWWCELLEKNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEVNYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFLG 675
LYF WI+QRLWC+LGLP++C++A PLDVLTDLVVLFTFSL QA+WCE+L +R+E K PW+FGV+ T IIISALGRI GLE W+ + G+DFEFS +RS +F+ GLIA V +AWHF +A++TL G ++SGG VE P+ + H Y+ SR+V++ W ILFT F+I ED+GFDYRGALLAW+LSL+A+FP PVS +WLGV TGIF+QGIG+NRLRFLG
Sbjct: 17 LYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGV--KVEPPKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLG 239
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.250e-39 Identity = 79/219 (36.07%), Postives = 125/219 (57.08%), Query Frame = 1
Query: 16 WIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQAWWCELLEKNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEVNYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFL 672
W+ QRL C+ LP +C++ + L+VLTDL+ L F L QAW+CE+LE+ R+ ++ + V+ +I+SA+ + F ++ ++ +M ++ + V+ +A+HF +A+ TL G VSG ++ E N H Y SR ++V + +L+ F E +G LLAWVLSL A F + S++WL + TG+FIQG GS RLRFL
Sbjct: 50 WLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGIVIIVIGLIVSAIETTDWFQDMRFN---DNSDWRDSHIVMAVVLITFVLVIVAYHFAEAWRTLPGAYYVSGNINLDIVIEE-NLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRFL 264
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.940e-38 Identity = 82/219 (37.44%), Postives = 126/219 (57.53%), Query Frame = 1
Query: 1 LYFGVWIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQAWWCELLEKNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEVNYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSN 657
+Y W++ RL C GLP +C + EPL+VLT L+VL FSL QAW+CE++E+ R+ K + ++ A+ +S L R L E + + + +FI+ LI V + HF +A+ L G ++SG VE E + + Y SRM+++ + IL+ F + D+G+ Y+ LLAWVLSL A F + +S+ WL VTTG+F+QGIG+
Sbjct: 48 MYILGWLLMRLSCYAGLPGDCNLPDEPLEVLTVLLVLLVFSLAQAWFCEIMEERRFRDLASKVYFPLLMVGAALALSGLSRAESLRN---SLQEERRDLTTFQVAIFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVRE-DLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIGNQ 262
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: A0A6H5JIF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIF9_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.230e-29 Identity = 80/230 (34.78%), Postives = 124/230 (53.91%), Query Frame = 1
Query: 4 YFGVWIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQA---WWCELLEKNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKG--ENVERP--EVNYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFL 672
Y W++ ++ C L P N A +PLDVLT+L L F+L QA + C+ L+ R+ + K+ ++ VV + I SAL + G H ED + V + +L +IAV +HF A+ TL G +++SGG E+ P N A Y + +++ + L F+ + ++Y LLAWV+SL+AIF P S++WLGVTTG F+QG+G+ +FL
Sbjct: 20 YVLCWLLMQVSCELEPPGNYRWACQPLDVLTELPFLLAFALGQATTAFLCDTLDSERFHSLSKERYLPVVVVGSGITTSALTKNDGFVD---THEIEDGMTTAVNVVSTLL-VIAVGLAFVYHFFVAWTTLPGAVMISGGVSTPEDATAPVRSGNRFARYMATAVLVAAFVALNAAFVHRRGDNWNYHYTLLAWVMSLIAIFDDPFSVVWLGVTTGAFLQGVGAYSFQFL 245
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.270e-29 Identity = 77/228 (33.77%), Postives = 120/228 (52.63%), Query Frame = 1
Query: 4 YFGVWIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQAWWCELLEKNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEV-----NYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFL 672
Y ++ + C +G+PENC A + +DVLT+L LF F+ A+ C +L R+ A KK + +V A+ + SAL G E PG D + + +L L+A+VF A+H+ A+ L G + G V P N + Y S V++L+ +LF+ F + +DY LLAW++SL+A F +S+ WLG+TTG+F+QG+G+ R L
Sbjct: 54 YIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSKKMYFPVLVIASGLATSALMNNDGFEG--LHDPGGDLSPAEAALSIILLILVALVF--AYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 274
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 6.810e-15 Identity = 48/142 (33.80%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 277 PGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEV-----NYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFL--GYD 681
PG + + + +L L+A+VF A+H+ A+ L G + G V P N + Y S V++++ +LF+ F + +DY LLAW++SL+A F +S+ WLG+TTG+F+QG+G+ R L GYD
Sbjct: 12 PGGELSPAEAALSIILLVLVALVF--AYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVLLQGYD 151
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: A0A7S3XT19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT19_HETAK) HSP 1 Score: 79.0 bits (193), Expect = 5.980e-14 Identity = 59/225 (26.22%), Postives = 96/225 (42.67%), Query Frame = 1
Query: 13 VWIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQAWWCELLEKNR-WEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQA--YMTLEGTLIVSGGKGENVERPEVNYHANYTGSRMVLVLWGILFTCFLIIEDNGFDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFLGY 678
+WII R+ C G P +C P + D+ +L + QAW+ E+LE+ R W + W F VV A + ++ I L EF F SG + + ++A+H + A ++ L+ Y R+ ++L+ +++ E LAW +SL A F P SLL L V+TG+ +QG+G+ F+ Y
Sbjct: 61 LWIITRVTCACGAPNDCVSESSPSTTMNDIQILLLYGFTQAWFVEILERRRFWHVFSLQRWYFWVVLAGTPPVFSV--ISDLPVMEFSI-SSSFSLSGGMVAVLVAAGTGFSLWLAFHILYAKHVYAMDNFLV-------------------YVLGRVGVLLFFLVYMMVAYNEXXXXXXXXXWLAWAVSLFASFNHPASLLLLAVSTGVMVQGLGAYHTDFVFY 263
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: C5L8A4_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L8A4_PERM5) HSP 1 Score: 63.2 bits (152), Expect = 4.190e-8 Identity = 56/212 (26.42%), Postives = 99/212 (46.70%), Query Frame = 1
Query: 97 DLVVLFTFSLVQAWWCELLE---KNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIM-FILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEVNYHANYTGSRM-VLVLWGILFTCFLII---------EDNG--FDYRGALLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFLGYDP 684
+L L F ++QAW+ E+++ +++W ++++ W F A + + + LG + L G ++ ++ F+ +A++ I WH V + L P A Y SR+ V+ ++GI F L+I +DN F +AW+LSL+A F P+SLL L +T+GIF+QGI + + + P
Sbjct: 130 NLANLAMFGIIQAWFVEVIDDPKRSKWIFSLRRWWFFITFFAASTVFTLLGMLDVLSHSSISPSGHLDNWNAFSIVLTFLASFLALL--IIWHVVYSIKVL----------------PTYADAAVYIISRVGVVCIFGITF---LLIHYDDKYNKHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLLMLSITSGIFVQGIAAYSAAGIFFRP 320
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Match: A0A7J6NSF0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NSF0_PEROL) HSP 1 Score: 53.9 bits (128), Expect = 8.060e-5 Identity = 47/208 (22.60%), Postives = 86/208 (41.35%), Query Frame = 1
Query: 94 TDLVVLFTFSLVQAWWCELLE---KNRWEATMKKPWVFGVVPATAIIISALGRIRGLEPWEFKHPGEDFEFSGVRSIMFILGLIAVVFFIAWHFVQAYMTLEGTLIVSGGKGENVERPEVNYHANYTGSRM-VLVLWGILFTCFLIIEDNGFDYRGA-------LLAWVLSLVAIFPAPVSLLWLGVTTGIFIQGIGSNRLRFLGYDP 684
T+L L F ++QAW+ E+++ +++W + + W F A + + + LG + L G ++ +++ WH + L P A Y SR V+ +G+ F +++ D +AW+LSL+A F P+SL+ L +T+GIF+QGI + + + P
Sbjct: 463 TNLANLAMFGIIQAWFVEVIDDPKRSKWIFSFPRWWFFITFFAASTVFTLLGMLDALSHNSISPSGHLDRWNAFSTVL-TXXXXXXXXXXXWHVWYSIKVL----------------PTYPDAAVYILSRFGVVCTFGVTFLLIHFDDEHNHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLIMLAITSGIFVQGIAAYSAAGIFFRP 653 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8716.20086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8716.20086.1 >prot_F-serratus_M_contig8716.20086.1 ID=prot_F-serratus_M_contig8716.20086.1|Name=mRNA_F-serratus_M_contig8716.20086.1|organism=Fucus serratus male|type=polypeptide|length=229bp LYFGVWIIQRLWCNLGLPENCEVAPEPLDVLTDLVVLFTFSLVQAWWCELback to top mRNA from alignment at F-serratus_M_contig8716:1252..3216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8716.20086.1 ID=mRNA_F-serratus_M_contig8716.20086.1|Name=mRNA_F-serratus_M_contig8716.20086.1|organism=Fucus serratus male|type=mRNA|length=1965bp|location=Sequence derived from alignment at F-serratus_M_contig8716:1252..3216- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8716:1252..3216- >mRNA_F-serratus_M_contig8716.20086.1 ID=mRNA_F-serratus_M_contig8716.20086.1|Name=mRNA_F-serratus_M_contig8716.20086.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig8716:1252..3216- (Fucus serratus male)back to top |