prot_F-serratus_M_contig871.20085.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig871.20085.1
Unique Nameprot_F-serratus_M_contig871.20085.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length73
Homology
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5JYE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE2_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.640e-12
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG+L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:   63 IRQRRLLFAGSLARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 118          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 4.950e-12
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  195 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 250          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5JFE2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.100e-11
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  325 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 380          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.110e-11
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  458 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 513          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.090e-11
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D+ AFG
Sbjct:  547 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAFG 602          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5K1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 7.190e-11
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG L R   GRLPKR++ G L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  219 IRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 274          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5K2V9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.380e-10
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    7 LWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            L+AG L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  287 LFAGALARQPDGRLPKRLMFGELAGGEKRSRGGQEQNWPKCVLDDLKAFG 336          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5JTZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ8_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.940e-9
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL+AG + R   GRLPKR+V G L G  +R   G+E+ W  CV  D++AFG
Sbjct:  176 IRQRRLLFAGAMARQPDGRLPKRLVLGELAGGEKRRSAGQEQNWPKCVLDDLKAFG 231          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5KQ16_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ16_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.430e-9
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIR 53
            +R RR+L+AG L R   GRLPKR++FG L G  +R RGG+E+ W  CV  D++
Sbjct:  195 IRQRRILFAGALTRQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLK 247          
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Match: A0A6H5K2V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.950e-9
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQSDIRAFG 56
            +R RRLL A  L R   GRLPKR++ G L G  +R RGG+++ W  CV  D++AFG
Sbjct:  175 IRQRRLLLARALARQPDGRLPKRLMLGELAGGEKRRRGGQKQNWPKCVLDDLKAFG 230          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig871.20085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYE2_9PHAE1.640e-1255.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JAH7_9PHAE4.950e-1255.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFE2_9PHAE1.100e-1155.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE1.110e-1155.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KS82_9PHAE2.090e-1155.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1X4_9PHAE7.190e-1153.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2V9_9PHAE6.380e-1054.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTZ8_9PHAE1.940e-950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ16_9PHAE2.430e-950.94Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K2V4_9PHAE6.950e-950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig871contigF-serratus_M_contig871:349949..350167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig871.20085.1mRNA_F-serratus_M_contig871.20085.1Fucus serratus malemRNAF-serratus_M_contig871 349949..350168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig871.20085.1 ID=prot_F-serratus_M_contig871.20085.1|Name=mRNA_F-serratus_M_contig871.20085.1|organism=Fucus serratus male|type=polypeptide|length=73bp
LRTRRLLWAGTLLRMSSGRLPKRIVFGNLEGALRRGRGGKEKEWTDCVQS
DIRAFGISGDWKATALKTEVWVE
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