mRNA_F-serratus_M_contig871.20082.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A6H5K7Y7_9PHAE (Signal peptidase complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Y7_9PHAE) HSP 1 Score: 314 bits (805), Expect = 2.730e-107 Identity = 147/182 (80.77%), Postives = 166/182 (91.21%), Query Frame = 1
Query: 1 EEELMVPQKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATARSNSRSLRKGMQVKTDFPRFDERYTVSVEERKPGAKPIEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVEKRVKDRNK 546
E+EL+VPQ VETGD+VKMKQ+MDDAVIKAVLEMGY+EDHTLNNAKLA+MALAC+FAVTAQFWPQPFP+SR LLA CC SYF CS LHLIVTYWEKD+ILAT RS+SRSL KG+ V+TDFPRFDE YTVSVEERKPG+KPIEE W+VGKYFDYEG+FDEWG+GDAVK LV R+EKR +D+ K
Sbjct: 3 EDELIVPQSVETGDTVKMKQIMDDAVIKAVLEMGYEEDHTLNNAKLAVMALACVFAVTAQFWPQPFPESRALLAVCCFSYFTCSFGLHLIVTYWEKDLILATKRSSSRSLGKGIFVRTDFPRFDEIYTVSVEERKPGSKPIEEQWHVGKYFDYEGNFDEWGMGDAVKNLVTRLEKRARDKKK 184
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A8J2SMV2_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMV2_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.270e-48 Identity = 80/171 (46.78%), Postives = 113/171 (66.08%), Query Frame = 1
Query: 22 QKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATARSNSRSLRKGMQVKTDFPRFDERYTVSVEERKPGAKPIEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVEKRVK 534
Q ++TGDS+K+KQ++D+A +KAVL GYDE H ++N K+++M +AC+FA AQF P PFP RP+L CC YF S L+V Y E+DI+L T N+ G++V+TDFP+F + +T+ VE P A P EE VGK+FD G+F E G D V+K+V + E + K
Sbjct: 18 QHIDTGDSLKVKQILDEATVKAVLAKGYDEVHFIDNLKISLMIIACLFACAAQFNPIPFPKVRPILGVCCGGYFVFSGIHQLVVKYVERDIVLITKPKNAEH---GLRVRTDFPKFQDLFTIIVEYDTPDAPPYEEKHCVGKFFDTGGYFWEAGFADTVQKMVAKFESKKK 185
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: K8YV93_NANGC (Signal peptidase complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV93_NANGC) HSP 1 Score: 164 bits (416), Expect = 5.280e-48 Identity = 81/176 (46.02%), Postives = 123/176 (69.89%), Query Frame = 1
Query: 19 PQKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATA--RSNSRSLRKGMQVKTDFPRFDERYTVSVEERKPGAKP-IEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVEKRVKD 537
P ++TGD +K+KQV+D+AV+KA+++ GY+E+ +N KLA+M +AC+FA+ AQF+P PFP+SRPLL CC++YF S + LIV+Y E+D IL T RS ++ + ++V+T FPRF + YTV VEE P + +++GK FD EG+F E GL V++L+ R +K++ D
Sbjct: 18 PLHIDTGDQMKVKQVLDEAVVKAIVDAGYEENFFYDNIKLALMVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKA-GEALKVRTQFPRFQDEYTVFVEEAGMQDPPTVSSKFSIGKVFDEEGNFYEEGLAREVQRLLDRYKKQMWD 192
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A7S1Y7Q9_9STRA (Signal peptidase complex subunit 2 n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y7Q9_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.020e-45 Identity = 83/180 (46.11%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 28 VETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATARSNSRSLRK-------GMQVKTDFPRFDERYTVSVE-ERKPGAKPIEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVEKRVKDRN 543
V+ GD +K+KQ++D+ AVLE ED L+N KLAIM LAC+FA AQF P PFPDSRP+L CC YF S L IVT+ +KD IL T +++R+ + G++V+TD PRF E Y V +E E+ P + +TW+VG +FD +G+FDE G+ +AV+ L R+EK D++
Sbjct: 31 VDVGDVIKLKQILDETTSAAVLEF-QKEDFRLDNMKLAIMTLACLFACLAQFAPIPFPDSRPVLGICCCIYFVLSGVLQAIVTFLDKDCILITKPTDARAQKSNPNLHQYGIRVRTDLPRFSEYYKVILEFEKMPNTVKVVQTWSVGNFFDVDGYFDEIGMTEAVQGLYKRLEKGEYDKD 209
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A7R9Z7Z3_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7Z3_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.520e-45 Identity = 82/178 (46.07%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 28 VETGDSVKMKQVMDDAVIKAVLEM-GYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATA-------RSNSRSLRKGMQVKTDFPRFDERYTVSVE-ERKPGA---KP-IEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVE 522
V+ GD VK+KQ++D+ V L+ EDHT++N KL+IMALAC FA+ AQF P PFPDSRP+L CC +YF S L L+ T+W+KD I+ T + NS + G++++T PRF E YTV +E ++K G +P ++ETW+VG++FD EG FDE+GL + +++L R E
Sbjct: 47 VDVGDVVKLKQILDETVAGTFLDKCSLVEDHTVDNIKLSIMALACTFAMVAQFAPLPFPDSRPVLGGCCAAYFVLSGFLQLVTTFWDKDCIMVTKAVEKAKNQKNSDMEKYGLRIRTSLPRFSEFYTVIIEFQKKYGDGENRPYVKETWSVGQFFDVEGMFDEYGLENEIEELYERFE 224
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A7S3V7R4_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7R4_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.100e-44 Identity = 85/197 (43.15%), Postives = 120/197 (60.91%), Query Frame = 1
Query: 1 EEELMVPQKVETGDSVKMKQVMDDAVIKAVLE-------------MGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILAT---------ARSNSRSLRKGMQVKTDFPRFDERYTVSVE-ERKPGAKPIEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVE 522
EEE +V +V+TGD +K+KQ++D+ V LE +G EDH L+N KL +MA+AC FA+ AQF P PFP+ RP+L CC YF+ S L LI T+ +KD IL T ++N + G++V+T FPRF E YTV +E E + +++TW+VG++FD EG FDE+GL AV+KL + E
Sbjct: 10 EEEEVVLLQVDTGDIIKLKQILDETVANTFLEENTLEGHDSRAKNIGLHEDHRLSNIKLILMAVACAFAMVAQFSPLPFPNCRPILGVCCAVYFSLSGVLQLITTFLDKDCILITKALEGKPAVVKNNPNLAKYGLRVRTIFPRFSEFYTVRIEFEGLENSPFVKDTWSVGEFFDKEGMFDEYGLQYAVEKLYRKFE 206
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A7S1Z321_TRICV (Signal peptidase complex subunit 2 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z321_TRICV) HSP 1 Score: 152 bits (383), Expect = 2.470e-42 Identity = 81/176 (46.02%), Postives = 111/176 (63.07%), Query Frame = 1
Query: 28 VETGDSVKMKQVMDDAVIKAVLEM-GYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILAT-------ARSNSRSLRKGMQVKTDFPRFDERYTVSVEERK---PGAKP--IEETWNVGKYFDYEGHFDEWGLGDAVKKLVGR 516
V+ GD VK+KQV+D+ V L+ EDH ++N KL IMA+AC FA+ AQF P PFPDSRP+L CC +YF S L ++ T+W+KD I+ T A N + G++++T PRF E YTV +E +K P K ++ETW+VG++FD EG FDE+GL D V+ L R
Sbjct: 54 VDVGDVVKLKQVLDETVAGTFLDTCKMAEDHAIDNIKLTIMAVACAFAMVAQFAPLPFPDSRPVLGGCCAAYFLLSGILQIVTTFWDKDCIMVTKPVEKGVAPKNLDMEKYGLRIRTILPRFSEYYTVIMEFQKKHEPDEKRKFVKETWSVGQFFDVEGMFDEFGLMDEVEDLYER 229
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A835ZBL5_9STRA (Signal peptidase complex subunit 2 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL5_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.870e-42 Identity = 82/204 (40.20%), Postives = 120/204 (58.82%), Query Frame = 1
Query: 4 EELMVPQKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATARSNSRSLRKG--MQVKTDFPRFDERYTVSVE------------------------------ERKPGAKPIEE---TWNVGKYFDYEGHFDEWGLGDAVKKLV 510
EE P KV+TGDS+K+KQ MD+AV++AV++MG++EDH +N KL +M +AC FA AQ +P+PFP+SRP+LA CC+SYFACS L ++++ E+D+IL T +N KG ++++T FPRF E YT +E ++PG ++ NVG YFD EG+ E G+ + + K V
Sbjct: 48 EEEREPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNN-----KGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAV 246
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A7S1GHQ4_CYCTE (Signal peptidase complex subunit 2 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHQ4_CYCTE) HSP 1 Score: 150 bits (378), Expect = 8.810e-42 Identity = 82/179 (45.81%), Postives = 116/179 (64.80%), Query Frame = 1
Query: 1 EEELMVPQKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATAR---SNSRSLRK-GMQVKTDFPRFDERYTVSVE-ERKPGAKPIEETWNVGKYFDYEGHFDEWGLGDAVKKLVGRVE 522
+EEL + Q V+ GD VK+KQ++D+ V +LE ED+ ++NAKL IM AC+FA+ AQF P PFPDSRP+L ACC YF S L I T+ +KD IL T S + +L+K G++V++ PRF E YT+++E P +E+ W+VG +FD +G FDE GL AV+ + R+E
Sbjct: 53 DEELELLQ-VDVGDMVKLKQILDETVASTILE-NVKEDYRIDNAKLGIMTAACVFAMIAQFAPIPFPDSRPVLGACCCIYFILSGVLQFITTFIDKDCILRTKALPPSGNTNLQKYGLRVRSSLPRFSEFYTLTIEFHGMPETPHVEQKWSVGNFFDVDGMFDEVGLMQAVQDVYKRLE 229
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Match: A0A7S3M684_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M684_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.180e-41 Identity = 77/165 (46.67%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 19 PQKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIFAVTAQFWPQPFPDSRPLLAACCVSYFACSMALHLIVTYWEKDIILATARSNSRSLRKGMQVKTDFPRFDERYTVSVEER-KPGAKPIEETWNVGKYFDYEGHFDEWGLGDAVKKLV 510
P +ETGDSVK+KQV+DDA IKA+ E GYD +++ +N KL +MAL+C+FA+ AQF+P PFP SRPLLA CC +YF S L I+T+ +KD IL S+ M+++T FPRF E +T+ V+ + P K VG+YF +G FDE + V++ V
Sbjct: 31 PFTIETGDSVKVKQVLDDAAIKAITEGGYDANYSWDNMKLLLMALSCVFAMVAQFFPIPFPASRPLLAVCCAAYFIISSVLQYIITFVDKDTILFV--KPSKECAHDMEIRTSFPRFQEYFTLIVQFKGNPNDKKTTAKMYVGRYFTEKGAFDEDAFINDVRRHV 193 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig871.20082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig871.20082.1 >prot_F-serratus_M_contig871.20082.1 ID=prot_F-serratus_M_contig871.20082.1|Name=mRNA_F-serratus_M_contig871.20082.1|organism=Fucus serratus male|type=polypeptide|length=188bp MVPQKVETGDSVKMKQVMDDAVIKAVLEMGYDEDHTLNNAKLAIMALACIback to top mRNA from alignment at F-serratus_M_contig871:253765..256848+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig871.20082.1 ID=mRNA_F-serratus_M_contig871.20082.1|Name=mRNA_F-serratus_M_contig871.20082.1|organism=Fucus serratus male|type=mRNA|length=3084bp|location=Sequence derived from alignment at F-serratus_M_contig871:253765..256848+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig871:253765..256848+ >mRNA_F-serratus_M_contig871.20082.1 ID=mRNA_F-serratus_M_contig871.20082.1|Name=mRNA_F-serratus_M_contig871.20082.1|organism=Fucus serratus male|type=CDS|length=1128bp|location=Sequence derived from alignment at F-serratus_M_contig871:253765..256848+ (Fucus serratus male)back to top |