prot_F-serratus_M_contig127.2005.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig127.2005.1
Unique Nameprot_F-serratus_M_contig127.2005.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1339
Homology
BLAST of mRNA_F-serratus_M_contig127.2005.1 vs. uniprot
Match: D7FK56_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK56_ECTSI)

HSP 1 Score: 665 bits (1715), Expect = 9.910e-213
Identity = 607/1389 (43.70%), Postives = 740/1389 (53.28%), Query Frame = 0
Query:    1 MTSKDGVASLSVPESCGGDGEGVKPTAEDVSRVDVHETNSVQILNVINEGIRSPKEVDYLSYGVSRPSTLLSLSLHSNRVSSLEGLSSMTALTSLNLSSNELDGATIRSCAPKLGALSCXXXXXXXXXXXXALLGLPFLPRLSRLLVPYNRLASLDGVQVLASSLTFLDARDNRISGPTGSHAPHLAALGRLKNLLLMSPGGGQR---NPVCYCPDYREGVLSAAPWLQTFDG-----------TPTCPLRVAP-----------------------DSPAHIKPAPRRDAVSGGRTARGENSRPRSGSRGEDPEAGAESERRREDTVGAAPEEVVPTPRIDAVAGRFLRRRGRGQPKRDSRWCLPDEGRGVVESSVEYSDGDGSPRAXXXXXXXXXRLAGDDGWSESK-EGVDRSDVGPAEHPE----DSVGRYVIGVSRSIET-----RARVGREREQGV-LGDDEELSGHGEGSGEDVAAEEQRLLNRLRSVAQEARLEAMDSRLQDMHVSWC---AKDAVEARRATAAAXXXXXXXXXXXXXXXVAARRTDIVTAGKLQRKKDDRHNLLQVDSNDGGGIPRT-QGAFGRGAARSRGVVGSKLATRPYNRESRRIWRRDTASETLPPSGIAPALDSNVTLSRNATLEASPLRRGLEDLTIRPHCCSS------------GGPALAPGVPGNSATAFSMSTSSNRVARRTTTSSPAR---ATGIARPRRLVGTSSL----LGSPGRGATAEASAVVGGTSMGXXXXXXXXXXXXXAALAGVTRRRSALCFLRWARHTERARAEATVAAAEAALAEARADAGRERLAWESLEKSLEASAATREREARETAEEEGREGVRIAQAACRSAEEAAVVLRRKLAQAEXXXXXXXXXXXXXXXXXXXXXXRGRAGAESEAATVVLGARA----ERLEEQLHGKARGEEEAEEECRRVRALLREVESRCRGLQDQVEXXXXXXKRVSEAAEDARTRAEAEAEKKVATAVEAEREPALALKRKLKETEAAARASTAVLREAEERQARGRRAVEELAQLARHQKAALQISRAEVGAARTEADKARRGAAEAKDKASRLTTEMQEQMKFLETRDEELAALRRSRRQEEKRLQAEKDRAQAFEKDAKEFESKLEASARAQGDLRAALMVKDKVLEDREKLVKELRDREEDALSEARTWRDRLDAHQSEADLQLDAARDEISELQAQVVELSGVEEQLRDVFKELRRYRKR------GAG-GSDEDDREGVHSRGKGPGGKDDAGG--LTAVAAVTAAAKAVEEELREQLGAKDEALRYVESELLSMKSLFEGKEASLRQELGSERNKLAREAAEWKRRAEEXXXXXXXXXXXAREQASTVADLRSSLWAGECRTKELE 1305
            M+S  GV  L+ P    G G      A +VSRVDVHE ++ ++LN +NE I S  EVD+L+YG++RPSTL+SLSLHSNR+SSLEG +SMTALT+LNLSSNELDG  IRSCAP LG L+              LLGLPFLP L RLLVPYNRL SLDGVQ LASSLT LDARDNRI+GP G+HAPHLAALGRL++L L S G G+R   NP+C C  YRE V +AA  L+T DG           T   P   A                        D+PA  +P        G R A  E + P +                   T   APEEV   PR DA+AGRF  R                            S      R            + D GWSE   +G+  S      H E    DS G  V+G +  ++T     RA  GR ++ G   G  +  SG  E  GEDVA EE  LL+RLRSVAQEARLE MDSRLQD+H       A+ A  A RATAA                 AA  T     G          +  Q      G +PRT +G       RS G   + +A RP        W R +       +G   +    VT    A      +  G   +T R  CC              GG    PG PG        S+    +A  +T ++      ++G AR RR+  T S     L + G G +  +S   GG S+G             AAL+G    R A  F RWAR T+RARA       + ALA AR +A RER AWES++ +LE SAA REREARE+A+EEGRE +R   AACRSAEE A  L  +LAQAE                        RA  ++EA+     ARA    ERLE QL GKAR E EAEEECRRVR+LLRE             XXXXXX R S  A+DAR RA  +A+KK+ +AV++ER+  + LK KL+  E AARA+           ARGRRA  ELA LAR QKAALQ++  E+ AARTE   A+                              LAA R++RRQ ++ L+A   RA+A +++ ++ E+K+ ASA AQGDLRAA+MVKDKVLEDREKLVKELR RE DAL+EA+ WRDRLDA Q+E+D +LDAAR+E+SEL+AQVV LSGVE+QLR+VFKELRRYRKR      G G G   DDR+G  S   G G +  +    LTAVAAVTAAAKAVEEELR QL AKD+ALRYVE+ELL MKSLFE KEA LRQELG ER+KLA E    ++R E+           AR+ AST   LRSSL  G+ R+KE++
Sbjct:    1 MSSPPGVVVLASPTKERGSGG----AAAEVSRVDVHEMSAARVLNAMNENIGSLGEVDFLAYGIARPSTLVSLSLHSNRLSSLEGFASMTALTALNLSSNELDGEAIRSCAPHLGPLASLESLDLSCNRIDGLLGLPFLPGLRRLLVPYNRLTSLDGVQALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREDVFAAARSLKTLDGENASFFFEDRETAATPAEAAAXXXXXXXXXXXXXXXXXXXDVTEDTPAASEPG-------GDRNAAAETAIPVAAV-----------------TALVAPEEVPIAPRFDALAGRFRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------RRVAVQSAGVESSSSDAGWSEGDGDGLRES------HAEGFDADSFG--VVGSAGRVDTEETAARAVPGRRKDGGGGRGIFDGESGVREALGEDVA-EEHGLLSRLRSVAQEARLEVMDSRLQDLHDKQAQDTARHAATAARATAALRRSVSNTTRGQAHEAGAAGPT---RRGSRSNPWAQHGDPQQRGVAGKGVVPRTVRGTGSTVPLRSNG--NTAVADRPVR------WTRASGDCAAIGNGGFGSR-GGVTQPPAAVARPEDVCGGEASVTARCSCCGGQDASELTLQAARGGGCTPPGEPGGVGAKPLESSGRRHLADASTQANRGPGPLSSGPARTRRVSVTPSAGSFALWNAGTGKSG-SSPSTGGLSIGGAVAAAALVGATAAALSGHDGHRLASSFSRWARDTDRARAXXXXXXXDEALAGARREAERERKAWESVQAALEGSAAAREREARESAQEEGREEMRSMAAACRSAEETASSLELRLAQAETDAAAAVLGQQQAQADVI------RAKTDAEASVKASEARATAEMERLEGQLRGKARAESEAEEECRRVRSLLREXXXXXXXXXXXXXXXXXXXXRASTDADDARRRAALDADKKLVSAVDSERDRIVVLKHKLEAAEDAARAAXXXXXXXXXXXARGRRAAAELADLAREQKAALQVANGEIRAARTERIGAQEAMXXXXXXXXXXXXXXXXXXXXXXXXXXTLAAERQARRQCQQELEAAVARAKALDQEKEDAEAKMMASAIAQGDLRAAVMVKDKVLEDREKLVKELRLREGDALAEAQAWRDRLDAQQAESDQRLDAAREEVSELEAQVVALSGVEDQLREVFKELRRYRKRHESEDDGKGDGXXXDDRQGGESSRDGSGRRQRSCSTELTAVAAVTAAAKAVEEELRAQLEAKDQALRYVENELLGMKSLFESKEACLRQELGEERDKLAGEVGVLRQRLEQAEESRAAAEESARQHASTSGALRSSLRNGDRRSKEVQ 1327          
BLAST of mRNA_F-serratus_M_contig127.2005.1 vs. uniprot
Match: A0A6H5KTU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU3_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.680e-61
Identity = 287/794 (36.15%), Postives = 343/794 (43.20%), Query Frame = 0
Query:   91 ALTSLNLSSNELDGATIRSCAPKLGALSCXXXXXXXXXXXXALLGLPFLPRLSRLLVPYNRLASLDGVQVLASSLTFLDARDNRISGPTGSHAPHLAALGRLKNLLLMSPGGGQR---NPVCYCPDYREGVLSAAPWLQTFDG-----------TPTCPLRVAP-----------------------DSPAHIKPAPRRDAVSGGRTARGENSRPRSGSRGEDPEAGAESERRREDTVGAAPEEVVPT----------------PRIDAVAGRFLRRRGRGQPKRDSRWCLPDEGRGVVESS-VEYSDGDGSPRAXXXXXXXXXRLAGDDGWSESK---------EGVDRSDVGPAEHPEDSVGRYVIGVSRSIETRARVGREREQGV---LGDDEELSGHGEGSGEDVAAEEQRLLNRLRSVAQEARLEAMDSRLQDMHVSWC---AKDAVEARRATAAAXXXXXXXXXXXXXXXVAARRTDIVTAGKLQRKKDDRHNLLQVDSNDGGGIPRTQGAFGRGAARSRGVVGSKLATRPYNRESRRIWRRDTASETLPPSGIAPALDSNVTLSRNATLEASPLRRGLEDL--TIRPHCCSSGGPALAPGVPGNSATAFSMSTSSNRVARRTTTSSPARATGIARPRRLVGTSSLLGSPGRGATAEASAVVGGTSMGXXXXXXXXXXXXXAALAGVTRRRSALCFLRWARHTERARAEATVAAAEAALAEARADAGRERLAWESLEKSLEASAATREREARETAEEEGREGVRIAQAACRSAEEAAVVLRRKLAQAE 813
            ALT+LNLSSNELDG  IRSCAP LG L+              LLGLPFLP L RLLVPYNRL SLDGVQ LASSLT LDARDNRI+GP G+HAPHLAALGRL++L L S G G+R   NP+C C  YRE V +AA  L+T DG           T   P   A                        D+PA  +P        GGR A  E + P +  R                  G                         P + A  G      GRG+             R  V+S+ VE S  D                    GWSE           EG D    G  E    S GR       + ET AR    R  G     G+ +  SG  E  GEDVA EE  LL+RLRSVAQEARLE MDSRLQD+H       A+ A    +ATAA                   R     T G+               SN     P  Q     GA + RGV G  +  R          R + ++  L  +G     D  V  +      A+  + G        +P    +G P +A G  G+ A   S     +      T     +A G        G SS L + G G +  +    GG S+G             AAL+G   RR A  F RWAR T+RARA A     +AAL  AR +A RER AWESL+ +LE SAA REREARE+A+EEGRE +R   AACRSA+EAA  L  +LAQAE
Sbjct:   10 ALTALNLSSNELDGEAIRSCAPHLGPLASLESLDLSCNRIDGLLGLPFLPGLRRLLVPYNRLTSLDGVQALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREEVFAAARSLKTLDGESASFVLEDRETAATPAEAAAKXXXXXXXXXXXXXXXXXXXXXXDTPAASEPR-------GGRNAAAETAIPVAAVRRASGPIPXXXXXXXXXCGGGXXXXXXXXXXXXXXXXXXXXXXXRPGVAAEGGG-----GRGRCLXXXXXXXTSSPRVAVQSAGVESSSSDA-------------------GWSEGDGDSLQESHAEGFDADSFGVVE----SGGRV-----DTEETAARAVPGRRTGGGGGRGNFDGESGVREVLGEDVA-EEHGLLSRLRSVAQEARLEVMDSRLQDLHDKQAQDTARHAATVAKATAA-----------------LRRSVSNTTRGQTHEAGAAGPTRRTSRSN-----PWNQ----HGAPQQRGVAGKGVVPRTV--------RGEGSTVPLRSNGNTAVADRPVRWTHGPGDFAAIGKGGFGSRGGVTQPQVAVAG-PEVACGREGSVAARCSCCRGED------TPELTLQAAGG-------GGSSALWNAGTGKSG-SPPYTGGFSVGGAVAAAALVGATAAALSGHDGRRLASSFSRWARDTDRARAAAAAVXXDAALDGARREAERERKAWESLQVALERSAAAREREARESAQEEGREEMRSMAAACRSAKEAASSLELRLAQAE 713          
BLAST of mRNA_F-serratus_M_contig127.2005.1 vs. uniprot
Match: A0A6H5LCW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCW9_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.100e-60
Identity = 162/291 (55.67%), Postives = 192/291 (65.98%), Query Frame = 0
Query: 1069 LEASARAQGDLRAALMVKDKVLEDREKLVKELRDREEDALSEARTWRDRLDAHQSEADLQLDAARDEISELQAQ------------VVELSGVEEQLRDVFKELRRYRKRGAGGSDEDDREGVHSRGKGPGGKDDAGGLTAVAAVTAAAKAVEEELREQLGAKDEALR-------YVESELLSMKSLFEGKEASLRQELGSERNKLAREAAEWKRRAEEXXXXXXXXXXXAREQASTVADLRSSLWAGECRTKELEQTLRALLNKYEHE----RRSTLKLSKIAALFNDLQ 1336
            + ASA AQGDLRAA+MVKDKVLEDREKL+KELR RE DAL+EA+ WRDRLDA Q+E+D +LDAAR+E+SEL+AQ            VV LSGVE+QLR+V KELRRYRKR                 +G         LTAV AVTAAAKAVEEELR QL AKD+ALR       YVE+ELL MKS+FE KEA LRQEL  ER+KLA E    ++R E+           AR+ AST   LRSSL  G+ R+KELE+TLRALL K+         ++ KLSK+AA+F  LQ
Sbjct:    1 MTASAIAQGDLRAAVMVKDKVLEDREKLIKELRLREGDALAEAQAWRDRLDAQQAESDQRLDAAREEVSELEAQASRSIFVDRGLSVVALSGVEDQLREVCKELRRYRKRHESEXXXXXXXXXXXXRQGE--------LTAVGAVTAAAKAVEEELRAQLEAKDQALRRVAPLLSYVENELLGMKSMFERKEACLRQELSEERDKLAGEVGVLRQRLEQAEAGRAAAEESARQHASTSDALRSSLRNGDRRSKELEETLRALLLKHTSHMAAAEATSKKLSKMAAIFQQLQ 283          
BLAST of mRNA_F-serratus_M_contig127.2005.1 vs. uniprot
Match: A0A835ZJ80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ80_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.060e-22
Identity = 74/166 (44.58%), Postives = 94/166 (56.63%), Query Frame = 0
Query:   67 PSTLLSLSLHSNRVSSLEGLSSMTALTSLNLSSNELDGATIRSCAPKLGALSCXXXXXXXXXXXXALLGLPFLPRLSRLLVPYNRLASLDGVQVLASSLTFLDARDNRISGPTGSHAPHLAALGRLKNLLLMSPGGGQRNPVCYCPDYREGVLSAA--PWLQTFDG 230
            P  LLSL+LH N ++SL+GL    +LT L+LSSN+L  A+I +CAP LG L              AL+GLP L  L  LL+PYN L SL+G+Q LA  L  LD R N ++ P   HA  L +L  L++L L S  G   NPVC  P Y    L+AA    L+  DG
Sbjct:   64 PQHLLSLNLHGNALTSLQGLERYPSLTQLDLSSNDLTTASIAACAPHLGHLHSLSTLSLAANRVGALVGLPCLAHLHTLLLPYNALTSLEGLQALAPRLRTLDLRANALAPPLAPHARVLVSLSSLRDLALRSADGACANPVCLEPAYGAAALAAAGVARLERLDG 229          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig127.2005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FK56_ECTSI9.910e-21343.70Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KTU3_9PHAE1.680e-6136.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LCW9_9PHAE1.100e-6055.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJ80_9STRA1.060e-2244.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 999..1075
NoneNo IPR availableCOILSCoilCoilcoord: 1245..1272
NoneNo IPR availableCOILSCoilCoilcoord: 1301..1321
NoneNo IPR availableCOILSCoilCoilcoord: 730..750
NoneNo IPR availableCOILSCoilCoilcoord: 1086..1117
NoneNo IPR availableCOILSCoilCoilcoord: 914..934
NoneNo IPR availableCOILSCoilCoilcoord: 795..836
NoneNo IPR availableCOILSCoilCoilcoord: 943..977
NoneNo IPR availableCOILSCoilCoilcoord: 434..454
NoneNo IPR availableCOILSCoilCoilcoord: 1122..1166
NoneNo IPR availableCOILSCoilCoilcoord: 854..902
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 52..1305
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 63..236
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 21..226
e-value: 3.1E-23
score: 83.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 164..185
score: 4.755
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 91..111
score: 4.816
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 69..90
score: 7.712
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 119..140
score: 8.32
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 141..162
score: 5.563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig127contigF-serratus_M_contig127:491183..520939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig127.2005.1mRNA_F-serratus_M_contig127.2005.1Fucus serratus malemRNAF-serratus_M_contig127 491183..520939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig127.2005.1 ID=prot_F-serratus_M_contig127.2005.1|Name=mRNA_F-serratus_M_contig127.2005.1|organism=Fucus serratus male|type=polypeptide|length=1339bp
MTSKDGVASLSVPESCGGDGEGVKPTAEDVSRVDVHETNSVQILNVINEG
IRSPKEVDYLSYGVSRPSTLLSLSLHSNRVSSLEGLSSMTALTSLNLSSN
ELDGATIRSCAPKLGALSCLKSLDLSCNKIDALLGLPFLPRLSRLLVPYN
RLASLDGVQVLASSLTFLDARDNRISGPTGSHAPHLAALGRLKNLLLMSP
GGGQRNPVCYCPDYREGVLSAAPWLQTFDGTPTCPLRVAPDSPAHIKPAP
RRDAVSGGRTARGENSRPRSGSRGEDPEAGAESERRREDTVGAAPEEVVP
TPRIDAVAGRFLRRRGRGQPKRDSRWCLPDEGRGVVESSVEYSDGDGSPR
ASVSWASSDGRLAGDDGWSESKEGVDRSDVGPAEHPEDSVGRYVIGVSRS
IETRARVGREREQGVLGDDEELSGHGEGSGEDVAAEEQRLLNRLRSVAQE
ARLEAMDSRLQDMHVSWCAKDAVEARRATAAAEAAAAAATKAATKAVVAA
RRTDIVTAGKLQRKKDDRHNLLQVDSNDGGGIPRTQGAFGRGAARSRGVV
GSKLATRPYNRESRRIWRRDTASETLPPSGIAPALDSNVTLSRNATLEAS
PLRRGLEDLTIRPHCCSSGGPALAPGVPGNSATAFSMSTSSNRVARRTTT
SSPARATGIARPRRLVGTSSLLGSPGRGATAEASAVVGGTSMGGAVCAAA
VMGAAAAALAGVTRRRSALCFLRWARHTERARAEATVAAAEAALAEARAD
AGRERLAWESLEKSLEASAATREREARETAEEEGREGVRIAQAACRSAEE
AAVVLRRKLAQAEADAASALARQQEAQANKNEIERRGRAGAESEAATVVL
GARAERLEEQLHGKARGEEEAEEECRRVRALLREVESRCRGLQDQVEESR
AREKRVSEAAEDARTRAEAEAEKKVATAVEAEREPALALKRKLKETEAAA
RASTAVLREAEERQARGRRAVEELAQLARHQKAALQISRAEVGAARTEAD
KARRGAAEAKDKASRLTTEMQEQMKFLETRDEELAALRRSRRQEEKRLQA
EKDRAQAFEKDAKEFESKLEASARAQGDLRAALMVKDKVLEDREKLVKEL
RDREEDALSEARTWRDRLDAHQSEADLQLDAARDEISELQAQVVELSGVE
EQLRDVFKELRRYRKRGAGGSDEDDREGVHSRGKGPGGKDDAGGLTAVAA
VTAAAKAVEEELREQLGAKDEALRYVESELLSMKSLFEGKEASLRQELGS
ERNKLAREAAEWKRRAEEAAAGRAAAQDAAREQASTVADLRSSLWAGECR
TKELEQTLRALLNKYEHERRSTLKLSKIAALFNDLQKEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt