prot_F-serratus_M_contig87.20063.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig87.20063.1
Unique Nameprot_F-serratus_M_contig87.20063.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length262
Homology
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 2.630e-74
Identity = 114/147 (77.55%), Postives = 123/147 (83.67%), Query Frame = 0
Query:   97 ASVLQEDRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRDPSSPTGWIIVEHHSSVMPTSPAQLKHAK 243
            A+V + DR+GVE T + WK+ VT GT DAP KTA LYA DGVLWGTVSEEVRDTPEEI+DYFDYFARLP LRLSE+TPVSLRVYGDFAT+AGTYTF WQG DG   EKRARFSFTFR DP SPT W IVEHHSS MPTSP QLKH +
Sbjct:   97 AAVTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLKHVR 243          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 2.380e-67
Identity = 119/162 (73.46%), Postives = 130/162 (80.25%), Query Frame = 0
Query:   96 AASVLQEDRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWIIVEHHSSVMPTSPAQLKHAKNIAESSRMQKVSP 256
            AA   +ED+  V  T VVWKDTVTSGT DAP KTAALYA DGVLWGTVSEEVRDTPE+I+ YFDYFARLP+LRL EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SPT W IVEHHSS MP +PA LK     AE   + KV+P
Sbjct:  126 AAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRVGPNAE---LVKVTP 284          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 3.860e-66
Identity = 113/156 (72.44%), Postives = 130/156 (83.33%), Query Frame = 0
Query:  102 EDRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWIIVEHHSSVMPTSPAQLKHAKNIAESSRMQKVSP 256
            ED++ V DT +VWK+TVTSGT DAP KTAALYA DGVLWGTVSEEVRDTPE+I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SP  W IVEHHSS MPT+PA LK    +  ++ + KV+P
Sbjct:  127 EDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKR---VGPNADLVKVTP 279          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.730e-65
Identity = 108/144 (75.00%), Postives = 121/144 (84.03%), Query Frame = 0
Query:  103 DRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWIIVEHHSSVMPTSPAQLKHAKNI 245
            D++ V DT +VWK+TVTSGT DAP KTAALYA D VLWGTVSEEVRDTPE+I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SP  W IVEHHSS MPT+PA LK    +
Sbjct:  113 DQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKL 256          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.630e-64
Identity = 105/142 (73.94%), Postives = 119/142 (83.80%), Query Frame = 0
Query:  103 DRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWIIVEHHSSVMPTSPAQLKHAK 243
            D++ V +T +VWKDTVT GT DAP KTAALYAPD VLWGTVSEEVR+TPE+I+DYFD+FARLPKLRL EYTP  +RVYG+FA QAGTYTFAW+G DG T EKRARFSFTFRR  P SP  W IVEHHSS MP +PA+LKH +
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVE 463          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 8.350e-64
Identity = 106/140 (75.71%), Postives = 114/140 (81.43%), Query Frame = 0
Query:  103 DRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRDPSSPTGWIIVEHHSSVMPTSPAQLKHA 242
            D++ V  TAVVWKDTVT GT D P KTA LYA D  LWGTVSEEVRDTPE+I+ YFDYFARLP LRL EYTPV++RVYGDFA QAGTYTF+WQ  DG T EKRARFSFTFRRDPS P  W IVEHHSS MPT+PA LK A
Sbjct:  186 DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRDPSKPQQWAIVEHHSSSMPTAPAGLKPA 325          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 8.110e-63
Identity = 105/140 (75.00%), Postives = 118/140 (84.29%), Query Frame = 0
Query:  102 EDRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWIIVEHHSSVMPTSPAQLK 240
            EDR+ V +T V+WKDTVTSGT DAP KTAALYAPDG LWGTVSEEVRDTP++I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTF+WQ  DG   EKRARFSFTFRRD P +   W IVEHHSS MPT+PA LK
Sbjct:  171 EDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLK 310          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.990e-62
Identity = 113/155 (72.90%), Postives = 126/155 (81.29%), Query Frame = 0
Query:  103 DRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWIIVEHHSSVMPTSPAQLKHAKNIAESSRMQKVSP 256
            D+  V  T ++WKDTVTSGT DAP KTAALYA DGVLWGTVSEEVRDTPE+I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SPT W IVEHHSS MP +PA LK     AE   + KV+P
Sbjct: 1258 DKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRVGPNAE---LVKVTP 1409          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 5.570e-54
Identity = 96/156 (61.54%), Postives = 114/156 (73.08%), Query Frame = 0
Query:   98 SVLQEDRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGT------------VSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRR-DPSSPTGWIIVEHHSSVMPTSPAQLK 240
            S  +E+ + V +T + W +TVT GT DAP +TA LYAPD +LWGT            VSE VRDTPE+I+ YFDYFARLP+L++ EYTP  +RVYGDFA QAG+YTF+WQG DG T E RARFSFTFRR  PSSP  W IVEHHSS MPTSP +L+
Sbjct:  203 SFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 358          
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Match: A0A836CEG0_9STRA (DUF4440 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG0_9STRA)

HSP 1 Score: 177 bits (448), Expect = 8.880e-53
Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 0
Query:  113 VWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQ-GADGGTTEKRARFSFTFRRDPSSPTGWIIVEHHSSVMPTSPAQLKHA 242
            +W  TVTSGT++A   TA LYAPDGVLWGT+SEEVRDTP EIFDYFDYFA  P LR+S Y P+ +RV GD A   G YTF W  G+ GGT  KRAR+SF +RRDP +PTGW I++HHSS MP +PA+L+HA
Sbjct:    8 LWLRTVTSGTANAARDTAQLYAPDGVLWGTLSEEVRDTPAEIFDYFDYFANKPHLRVSGYRPL-IRVDGDVALNTGYYTFTWDDGSSGGTASKRARYSFVYRRDPLAPTGWTIIDHHSSAMPDAPAKLRHA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSB2_9PHAE2.630e-7477.55DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]
D7FN21_ECTSI2.380e-6773.46Similar to Uncharacterized protein conserved in ba... [more]
D7FUF8_ECTSI3.860e-6672.44Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JT29_9PHAE1.730e-6575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0Z5_9PHAE1.630e-6473.94PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JX02_9PHAE8.350e-6475.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI8.110e-6375.00Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE1.990e-6272.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTS4_9PHAE5.570e-5461.54PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CEG0_9STRA8.880e-5364.89DUF4440 domain-containing protein n=1 Tax=Tribonem... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027843Domain of unknown function DUF4440PFAMPF14534DUF4440coord: 125..222
e-value: 4.4E-19
score: 68.9
NoneNo IPR availableGENE3D3.10.450.50coord: 95..248
e-value: 5.3E-35
score: 122.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.742
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 102..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig87contigF-serratus_M_contig87:355146..443684 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig87.20063.1mRNA_F-serratus_M_contig87.20063.1Fucus serratus malemRNAF-serratus_M_contig87 353805..443895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig87.20063.1 ID=prot_F-serratus_M_contig87.20063.1|Name=mRNA_F-serratus_M_contig87.20063.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MGHLSVYRRCMGCLVALLALQSELALAFLRSPQTRACTRRPGALRCKTTP
KPNGEMKTTTRKKAIEEMSTVATVIAASGATLMNNPASANAALRFAASVL
QEDRQGVEDTAVVWKDTVTSGTSDAPDKTAALYAPDGVLWGTVSEEVRDT
PEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGG
TTEKRARFSFTFRRDPSSPTGWIIVEHHSSVMPTSPAQLKHAKNIAESSR
MQKVSPSRGGS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027843DUF4440
IPR032710NTF2-like_dom_sf