mRNA_F-serratus_M_contig87.20054.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig87.20054.1
Unique NamemRNA_F-serratus_M_contig87.20054.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: D8LKH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH4_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 2.730e-79
Identity = 128/188 (68.09%), Postives = 146/188 (77.66%), Query Frame = 2 
Query:  248 MKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVM 811
            M+ K+K IQ+YITSL+                           YNYTGEAFF KKKDRGFRHVTSTAKLIIR+ALPIQCVEAV++GA+ TA+M ++DRFPVCFRSSLDGRV+RHIVLAVRSG  WG+LGLSRR  LMYKEL+Y  FSKL+ DFRESYA SWH LEQVWVGFPLPHDISSN+ +KWKV+
Sbjct:    1 MRGKLKHIQSYITSLE---------------------------YNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDKLMYKELKYDLFSKLVGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVL 161
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A6H5JJ50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ50_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.300e-70
Identity = 118/175 (67.43%), Postives = 132/175 (75.43%), Query Frame = 2 
Query:  377 YNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQ------------------------------IDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVM 811
            YNYTGEAFF KKKDRGFRHVTSTAK IIR+ALPIQCVEAV++GA+ TA+M +                              +DRFPVCFRSSLDGRV+RHIVLAVRSG  WG+LGLSRR TLMYKEL+Y  FSKL+ DFRESYA +WH LEQVWVGFPLPHDISSN+ VKWKV+
Sbjct:    5 YNYTGEAFFVKKKDRGFRHVTSTAKQIIREALPIQCVEAVFVGAYLTADMAEAGPLFFQTLADSSTLSPYLRRFLLPGYMVGVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLVGDFRESYASNWHRLEQVWVGFPLPHDISSNVAVKWKVL 179
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A835YRP7_9STRA (Vasohibin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.250e-48
Identity = 85/203 (41.87%), Postives = 128/203 (63.05%), Query Frame = 2 
Query:  203 PPFPQQP-EVASSKIPMKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKV 808
            PP P+ P  +A+ ++P++ K+K +Q YI + +                           YN+TG+ +++ KK RGF HV + A+ I+R+ALPIQCVEA +LGA+ T ++  ++R+P+ F+S+L+G   RHIVLAV SG  WGALG+SRR  L YKEL+Y S   L+A+F  +Y   WH L+ +++G PLP + S N P++WKV
Sbjct:   15 PPVPEPPCSLATGRLPLRDKLKQLQKYIEAFE---------------------------YNHTGKCYYSTKKFRGFAHVANVAQDIMREALPIQCVEATFLGAYLTCDLRDVERYPLSFKSALEGHEHRHIVLAVTSGGKWGALGISRRDCLAYKELKYSSLGALVAEFAAAYTSCWHQLQAIYLGLPLPRNPSCNAPIRWKV 190
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A2D4BXV4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV4_PYTIN)

HSP 1 Score: 174 bits (441), Expect = 5.890e-44
Identity = 97/243 (39.92%), Postives = 133/243 (54.73%), Query Frame = 2 
Query:  200 KPPFPQQPEVASSKIPMKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPD 928
            +PP P+ P   +SK P+K ++  +Q Y+ SL+                           YNYTG  +F   K+R F+ + +TAK I  + LPIQC+EAV+L A+ TAN P ++RFP+ F+S     V RHIVLAVR    WGALGLSR   LMYKELR+ S S+L  DF   +    H + ++ VGFP PHDI S+  V+W+V+   V T  EW+  A  LD     A  +     + G +PD
Sbjct:   27 RPPMPKLPSF-TSKTPIKTRLMAVQNYLNSLE---------------------------YNYTGTLYFDVNKNRSFKSIVNTAKEIAAEMLPIQCLEAVFLAAYITANFPDLERFPLSFKSQAGNSVHRHIVLAVRHQNKWGALGLSRSERLMYKELRFNSLSELTQDFCHGFESVCHVVTKLHVGFPFPHDIHSSEKVEWRVLNVPVDT-VEWSHVATHLDAXAKEAGDLLAFRRAKGAMPD 240
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: K3X8V2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8V2_GLOUD)

HSP 1 Score: 169 bits (427), Expect = 6.560e-43
Identity = 93/212 (43.87%), Postives = 126/212 (59.43%), Query Frame = 2 
Query:  365 NCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFPVCFRSSLDGRVFRHIVLAVR-SGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPDH---PLLSSSPDGNEGGRSVAAK 988
            N + YNYTG  +F   K+R F+ + STAK I+ + LPIQC+EAV+L ++ TAN   ++RFP+ F+S     V RHI+LAVR     WGALGLSR   LMYKEL+Y S S+LI DF   +   +H + +V+VGFP  HDI S+  V+W+VM  S+  +E WT AA   D F   A  +  +  S G LP+      L  +P+   G    A K
Sbjct:   51 NTLEYNYTGTQYFDVNKNRSFKSIVSTAKDIVNETLPIQCLEAVFLASYLTANASDLERFPISFKSIAGTNVHRHIILAVRYQHNKWGALGLSRSDKLMYKELKYASLSELIQDFCHEFELLYHRVLKVYVGFPFSHDIHSSEKVEWRVMNISLEFNE-WTDAAQHFDSFAKDAVDILAYKKSKGVLPESFAAKFLLHTPESESGASKNAIK 261
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A1V9ZEI7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEI7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 8.250e-43
Identity = 98/253 (38.74%), Postives = 139/253 (54.94%), Query Frame = 2 
Query:  200 KPPFPQQPEVASSKIPMKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTAN-MP---------QIDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPD 928
            +PP P+ P+   SK  +KAK+  IQAY+++L+                           YNYTG  +F   K+R ++ +  TAK II +ALPIQC+EAV++ A+ TA+ MP         QIDR P+ F+S      FRHIVL VR    WGALGLSR   LM K+L+Y SFS L+AD+ E++    H + +V+VGFP  HDI S+  V+W+V+   +  +  W + A  +D F   +  +  H    G LPD
Sbjct:   25 EPPVPEPPKW-KSKSSIKAKLHAIQAYLSALE---------------------------YNYTGRLYFNVNKNRSYKSIYGTAKEIISEALPIQCLEAVFVAAYLTAHGMPEYEGLNPSQQIDRVPISFKSRSGDSTFRHIVLGVRHQHVWGALGLSRSPALMNKDLKYKSFSDLVADYIENFVKCQHQVTKVYVGFPFSHDIHSSEKVQWRVLNIKI-VEHPWEAVAAQIDLFTRESSELMSHLHRVGELPD 248
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A1W0A7K4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7K4_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.870e-42
Identity = 84/198 (42.42%), Postives = 119/198 (60.10%), Query Frame = 2 
Query:  365 NCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTAN----------MPQIDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPD 928
            N + YNYTG+ +F   K R ++ +  TAK II ++LPIQC+EAV++ A+ TAN            Q+DR P+ F+S   G VFRHIVL ++    WGALGLSR A LM KEL+Y +FS+L+AD+ E +A   H + +++VGFP  HDI S+  V+W+V+   + +D  W + A   D F      +  H    G LPD
Sbjct:   50 NALEYNYTGKLYFNVNKHRSYKSIYGTAKEIIHESLPIQCLEAVFVAAYLTANGNTEYEGMNPNQQVDRVPISFKSRSGGTVFRHIVLGIKHQHMWGALGLSRNADLMNKELKYKNFSELLADYIEHFAKCCHEVTKIYVGFPFSHDIHSSEKVQWRVLNIKI-SDHPWDAVAAQFDLFTREHSELMSHLHRVGELPD 246
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BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A8K1CUI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUI4_PYTOL)

HSP 1 Score: 168 bits (426), Expect = 2.680e-41
Identity = 95/255 (37.25%), Postives = 143/255 (56.08%), Query Frame = 2 
Query:  206 PFPQQPEVASSKIPMKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCV-----RYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFPVCFRSSLDGRVFRHIVLAVR-SGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPDHPLLSSSP 952
            P P +    ++K  +K +++ IQ Y+ +L+  L            ++  LL   C      RYNYTG  +F   K+R F+ + STAK I+ + LPIQC+EAV+L A+ T+N+  ++RFP+ F++     V RHI+LAVR     WGALGLSR   LMYKELR+ S S+L+ ++   +    H + ++++GFP PHDI S+  V+W+ +  S+ T+  WT  A  LD F   A  +     + G LP    LS  P
Sbjct:    7 PTPPKLPTFTTKTSIKTRLQAIQNYLNALEYALRMV---------KQTTLLLFTCSLRDFDRYNYTGTLYFDVNKNRSFKSIVSTAKDIVSEMLPIQCLEAVFLAAYLTSNVADLERFPISFKTEAGSSVHRHIILAVRHQNNKWGALGLSRSEKLMYKELRFNSMSELVQEYCRCFESVCHSVIKLYIGFPFPHDIHSSEKVEWRALNLSM-TENPWTDIASHLDAFAKEAADILSFKRAKGTLPSS-FLSKFP 250
[Close]
BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: A0A5D6XNG0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNG0_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.990e-40
Identity = 95/233 (40.77%), Postives = 131/233 (56.22%), Query Frame = 2 
Query:  233 SSKIPMKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFPVCFRSSLDGRVFRHIVLAVR-SGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPD 928
            S+K PMK ++  IQ  I++L+                           YNYTG  +F   K+R F+ + STAK I+ + LPIQC+EAV+LGA+ TA+ P+++RFP+ F++   G V RHIVLAVR     WGALGLSR   LM KEL+Y S S+L+ DF   +A  +H + +V+ GFP  HDI S+  V+W+VM   +     W  AA  LD F   A  +     + G LPD
Sbjct:   34 SAKTPMKTRLAAIQHVISTLE---------------------------YNYTGTLYFDVTKNRSFKSIVSTAKDILNEVLPIQCLEAVFLGAYLTASAPELERFPISFKTVAGGCVHRHIVLAVRHQHAKWGALGLSRSEKLMAKELKYASLSELVQDFCREFALLFHAVLKVYAGFPFSHDIHSSEKVEWRVMNLPL-EHATWADAAQHLDAFSKEALDILAFKRAKGELPD 238
[Close]
BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Match: W4G7H5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7H5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.100e-39
Identity = 86/197 (43.65%), Postives = 113/197 (57.36%), Query Frame = 2 
Query:  365 NCVRYNYTGEAFFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMP---------QIDRFPVCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLIADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTSAAIGLDRFVICAPAMFEHFASTGRLPD 928
            N + YNYTG+ +F   K+R  + +  TAK II DALPIQC+EAV+L A+ TA  P         QIDR P+ F++S  G  FRHIVLA++    WGALGLSR   LM KEL++ S S L+ +F E Y    H + +V+VGFP  HDI S   V+W+V+   +     W + A  LD F      +  H    G LPD
Sbjct:   53 NALEYNYTGKMYFDVSKNRSHKSIYGTAKDIIHDALPIQCLEAVFLAAYLTAGGPEYEGATFNHQIDRIPISFKTSSGGTTFRHIVLAIKHQHLWGALGLSRSPGLMNKELKFKSLSDLVGNFVEQYTAVCHDVIKVYVGFPFSHDIHSTERVEWRVLNIKLSI-HPWDNVAAQLDLFTREYSELMSHLHRVGDLPD 248
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH4_ECTSI2.730e-7968.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ50_9PHAE1.300e-7067.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRP7_9STRA3.250e-4841.87Vasohibin-domain-containing protein n=1 Tax=Tribon... [more]
A0A2D4BXV4_PYTIN5.890e-4439.92Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3X8V2_GLOUD6.560e-4343.87Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9ZEI7_9STRA8.250e-4338.74Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1W0A7K4_9STRA4.870e-4242.42Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8K1CUI4_PYTOL2.680e-4137.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XNG0_9STRA3.990e-4040.77Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W4G7H5_9STRA2.100e-3943.65Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig87contigF-serratus_M_contig87:46706..51106 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.9
Seed ortholog evalue4.5e-67
Seed eggNOG ortholog2880.D8LKH4
Preferred nameVASH1
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000768,GO:0001525,GO:0001568,GO:0001701,GO:0001890,GO:0001892,GO:0001936,GO:0001937,GO:0001938,GO:0001944,GO:0003006,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006949,GO:0006950,GO:0007275,GO:0008150,GO:0008284,GO:0008285,GO:0009611,GO:0009653,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010468,GO:0010594,GO:0010596,GO:0010604,GO:0010628,GO:0010632,GO:0010633,GO:0012505,GO:0016043,GO:0016525,GO:0019222,GO:0022414,GO:0022603,GO:0030334,GO:0030336,GO:0032501,GO:0032502,GO:0032879,GO:0035239,GO:0035295,GO:0040012,GO:0040013,GO:0042127,GO:0043009,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043535,GO:0043537,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045026,GO:0045177,GO:0045765,GO:0045766,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048608,GO:0048646,GO:0048731,GO:0048856,GO:0050678,GO:0050679,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051271,GO:0060255,GO:0060674,GO:0060711,GO:0060716,GO:0061024,GO:0061025,GO:0061458,GO:0065007,GO:0071840,GO:0072358,GO:0072359,GO:0080134,GO:0080135,GO:0090342,GO:1901342,GO:1901343,GO:1901490,GO:1901491,GO:1904018,GO:2000026,GO:2000145,GO:2000146,GO:2000181,GO:2000772
EggNOG free text desc.negative regulation of lymphangiogenesis
EggNOG OGs2BW4P@1,2QPPX@2759
Ec32 ortholog descriptionVasohibin
Ec32 orthologEc-16_002970.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2456
Cds size1122
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig87.20054.1prot_F-serratus_M_contig87.20054.1Fucus serratus malepolypeptideF-serratus_M_contig87 47793..50859 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932543.9870265-UTR-F-serratus_M_contig87:46705..477921622932543.9870265-UTR-F-serratus_M_contig87:46705..47792Fucus serratus maleUTRF-serratus_M_contig87 46706..47792 -
1690964358.2450898-UTR-F-serratus_M_contig87:46705..477921690964358.2450898-UTR-F-serratus_M_contig87:46705..47792Fucus serratus maleUTRF-serratus_M_contig87 46706..47792 -
1622932544.1299448-UTR-F-serratus_M_contig87:50859..511061622932544.1299448-UTR-F-serratus_M_contig87:50859..51106Fucus serratus maleUTRF-serratus_M_contig87 50860..51106 -
1690964358.328128-UTR-F-serratus_M_contig87:50859..511061690964358.328128-UTR-F-serratus_M_contig87:50859..51106Fucus serratus maleUTRF-serratus_M_contig87 50860..51106 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932544.0030973-CDS-F-serratus_M_contig87:47792..483561622932544.0030973-CDS-F-serratus_M_contig87:47792..48356Fucus serratus maleCDSF-serratus_M_contig87 47793..48356 -
1690964358.2671227-CDS-F-serratus_M_contig87:47792..483561690964358.2671227-CDS-F-serratus_M_contig87:47792..48356Fucus serratus maleCDSF-serratus_M_contig87 47793..48356 -
1622932544.0226839-CDS-F-serratus_M_contig87:48726..488591622932544.0226839-CDS-F-serratus_M_contig87:48726..48859Fucus serratus maleCDSF-serratus_M_contig87 48727..48859 -
1690964358.2775211-CDS-F-serratus_M_contig87:48726..488591690964358.2775211-CDS-F-serratus_M_contig87:48726..48859Fucus serratus maleCDSF-serratus_M_contig87 48727..48859 -
1622932544.0504665-CDS-F-serratus_M_contig87:49123..492631622932544.0504665-CDS-F-serratus_M_contig87:49123..49263Fucus serratus maleCDSF-serratus_M_contig87 49124..49263 -
1690964358.286789-CDS-F-serratus_M_contig87:49123..492631690964358.286789-CDS-F-serratus_M_contig87:49123..49263Fucus serratus maleCDSF-serratus_M_contig87 49124..49263 -
1622932544.07885-CDS-F-serratus_M_contig87:49669..498261622932544.07885-CDS-F-serratus_M_contig87:49669..49826Fucus serratus maleCDSF-serratus_M_contig87 49670..49826 -
1690964358.2962594-CDS-F-serratus_M_contig87:49669..498261690964358.2962594-CDS-F-serratus_M_contig87:49669..49826Fucus serratus maleCDSF-serratus_M_contig87 49670..49826 -
1622932544.1005201-CDS-F-serratus_M_contig87:50083..501641622932544.1005201-CDS-F-serratus_M_contig87:50083..50164Fucus serratus maleCDSF-serratus_M_contig87 50084..50164 -
1690964358.3060637-CDS-F-serratus_M_contig87:50083..501641690964358.3060637-CDS-F-serratus_M_contig87:50083..50164Fucus serratus maleCDSF-serratus_M_contig87 50084..50164 -
1622932544.115411-CDS-F-serratus_M_contig87:50812..508591622932544.115411-CDS-F-serratus_M_contig87:50812..50859Fucus serratus maleCDSF-serratus_M_contig87 50813..50859 -
1690964358.316638-CDS-F-serratus_M_contig87:50812..508591690964358.316638-CDS-F-serratus_M_contig87:50812..50859Fucus serratus maleCDSF-serratus_M_contig87 50813..50859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig87.20054.1

>prot_F-serratus_M_contig87.20054.1 ID=prot_F-serratus_M_contig87.20054.1|Name=mRNA_F-serratus_M_contig87.20054.1|organism=Fucus serratus male|type=polypeptide|length=374bp
MKAKIKLIQAYITSLDSTLPRAGILWNHYGAERLQLLRKNCVRYNYTGEA
FFTKKKDRGFRHVTSTAKLIIRDALPIQCVEAVYLGAFFTANMPQIDRFP
VCFRSSLDGRVFRHIVLAVRSGVTWGALGLSRRATLMYKELRYPSFSKLI
ADFRESYAGSWHHLEQVWVGFPLPHDISSNIPVKWKVMRASVGTDEEWTS
AAIGLDRFVICAPAMFEHFASTGRLPDHPLLSSSPDGNEGGRSVAAKGDG
DDPRSSPGAGSPGVTSPGALPYWLGPGVSARRRRRASTAIGRSVTNQSNS
VGDKGTLLGRSLLEKYDASKDGIRCVSGPGSCDSGMFVSPPRARARTSGA
GVDEGPHREAMGIAVDGKSNAED*
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mRNA from alignment at F-serratus_M_contig87:46706..51106-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig87.20054.1 ID=mRNA_F-serratus_M_contig87.20054.1|Name=mRNA_F-serratus_M_contig87.20054.1|organism=Fucus serratus male|type=mRNA|length=4401bp|location=Sequence derived from alignment at F-serratus_M_contig87:46706..51106- (Fucus serratus male)
CGTTATCTGTACTATTGTACGTCATAGTCTATCCTCCATGACCAAAGAGA
GGTACTGTAGAGAAGCGTTGGTACAACTACAGTATACAGTAGTAGTTGGT
GTTTTTTTAAAACAATCACCCTAACGAGGAGCTTCGTGACAAGTCGAGGG
GTACCGCTATGAATCGTACACGCCGCGTCGCTGCCTTGACGTCGACACAA
AGCCACCGTTTCCTCAGCAGCCGGAAGTGGCGAGCAGCAAGATCCCTATG
AAGGCTAAAATCAAGCTCATCCAGGCTTACATCACTTCGCTGGAGTGAGT
GGTGCTATCTAAATGTTCTGGTCAGAGAGCTGAGGTTCGGTCGATTGACG
CTTCATGCGTTCACAGGGGGGAATGTCGTGGTGTCCTCGAGCGCGCTCAA
GACGTGAATACATCATGATGGGCAAACGAATATTATTGGTACTACAGTAA
GCACCATCGAACAAAATATTCTGGTCGGAGAGCCGAGGTTCGGTCGATTG
ATGCTTCATGCGTTCACAGAGGGGAATGTCGTGGTGTCCTCGAGCGCGCT
CAAGACGTGAATACATCATAATGGGCAAACGAACATATTGGTACTACAGT
AACCACCATTGGACAAAATATAGAGTTGGTCGCGACGCTAACGAGCTGTA
ATATTTCGAAATGGCTTCAAAAATTAGAAAATGGAAGGGTTATACTCGTA
TTGCGACGGATTACGAGTTACCCTAGTAAGTTTTAACTCCCGAGTCCCTC
GTAACGGTGCGAGTGTTCACCTGGTACTTCTCTTCTGTCTACTACGTACT
TCATTGTGCCTGCAGACAGACATAACCTATCATCGTAGGCCGACCGTATA
GTCTGAGAAGTGTGTCAACGACCCCCAAAGTTATAGCTCTCTCGTCAAAT
TAACGCTATGATAATATTAACCGAAACTACTGTGAAAATGAGTTCAACTC
TTCCAAGGGCTGGCATTCTCTGGAACCACTATGGAGCGGAGCGTCTGCAA
CTTTTAAGAAAAAACTGTGTCAGGTGCATCCAGTTTTTAGCAGTTTCCCT
TAGTGTGCAGGGTACACATAGAGAGGACAGGAGGTGTGATGGCTCGATAC
TGGAACAGCAACTGACTTATCGACAACCCTGATACCAAGTTTGCTACCAC
AATGAGTCAGTAAAGCCATTTAATCGCCGAGCCACAACGACAGAAAACGA
CGACGAGTATATTTCGAATTATATTCCAATTGCTGGTCTAGGCTTATTAC
AACGCGTTAGCAACAAAACCCTTTTTCAAGGTATAACTACACGGGGGAGG
CGTTCTTCACGAAAAAGAAGGACCGAGGGTTTAGACACGTGACCTCTACG
GCGAAGCTTATTATCCGCGATGCGCTGCCAATCCAGTGCGTCGAGGCGGT
GTATCTTGGTGCATTCTTTACCGCCAACATGCCCCAAGTGAGGATACAGC
CAGTACGCGCCGGGGTTGGCGATGAGCTCGGCCCGAGCGGAATCGAAACC
ACGGCGTGAAACACGCAAACCATGGCGATGCTTTCTATAAAAAAATATGA
TTCTAAGGAGCAGCACTTTATCTCTGTCCCGCGTTGCATATTTTGGCGGC
TCTCGTAGGCCACGACATCTTGATCCACTCTCGATTGGCGTCTGTGTGTA
GGGTTGCCGATGTCGTGCTCGGGGGTGGTCGAGTCGATGCTTCCCTGCTG
CTGAATTATCGACTCCGAACTGTGAGGGATGGTTCCAGCGGCTTATTTAT
TACCTCTTGGACGGTGACGGACAAAACATGCTGGTCTTGATGTTCTTGTT
TTCTAGAAACTAACGCCGGCTATCCACGTCATCCCCAAGGCAGATAGATC
GATTTCCTGTATGCTTTCGCTCTTCTCTGGACGGCCGAGTTTTCCGACAC
ATTGTGCTGGCCGTTCGAAGCGGGGTCACGTGGGGTGCTCTTGGTCTAAG
TCGACGCGCCACTCTCATGTACAAGGAACTCAGGCAAGGGAGAACATTTT
TACTTGCCGCTACAGCAGCATCAGCAAAAACCGTGCGGTCTCTGCAATAC
ATTTTAAGAAGACCAATTCATGACATGCGGCCTAACAAGAAACACAAAAA
CCTCGCGGGTGAAACGCTGCTTCGACCCAGCATTAAGTTATATCTACCGT
TCGCCAAATAAGAGCCTGCACCCTTAGCGAAACCAAAATATATTCAAGGC
TAGCAAGCATGCGGTACACAACATGAAAACTTTCCCCCGCGACACAGATA
TCCCTCGTTCTCCAAGCTGATCGCCGACTTTAGGGAGTCCTACGCTGGAA
GCTGGCACCACTTGGAGCAAGTGTGGGTGGGCTTCCCTCTGCCTCATGAT
ATATCCTCTAATATACCTGTCAAGTGGAAGGTGTGGGGCATAACTTCAAA
GGAAGCATGCCACAGTTTTTACATTGTTTCTGGTAAAGAACAAACCGGTG
GAGTTCAGGGCGAGGTTGGGGCATCGTAATCGTTGAAAGAGTGAAAACTG
TGGTTGGACTTCGCCGTGGTATCTCAGCACAAAACCTAATTGCCTGTGTA
AAGTTTACTCAATATATAAGTTGTTCCCTTTTTTCTATGATATTAGCTAA
ACAGAAAAGCTTTCCACCATTTATCCGTGTTCTTCGGCGGAGCAATACAT
GGGTTTGAGGGGAAAAGCTTGCAAAAATACGTCGATACGAGAACCTGATA
TACTAGAACCGCGCACCTGGCATCACAACATATGATATACGGTGGTACAG
GTCATGCGGGCAAGCGTCGGGACAGATGAGGAGTGGACATCGGCGGCTAT
TGGCCTCGACCGCTTTGTGATATGCGCCCCAGCGATGTTCGAACATTTTG
CGTCAACCGGAAGACTCCCCGATCACCCGCTTTTGAGCAGCTCGCCCGAC
GGCAACGAAGGGGGTCGTAGCGTGGCTGCAAAAGGGGATGGCGATGACCC
TAGAAGCTCCCCAGGTGCTGGATCCCCTGGAGTGACGTCACCTGGAGCTC
TGCCGTACTGGCTAGGGCCAGGTGTGTCGGCAAGAAGACGTCGCCGCGCG
AGCACTGCGATCGGAAGATCGGTAACAAATCAGAGCAATAGCGTGGGGGA
CAAGGGTACTCTCTTGGGACGCAGCCTACTCGAGAAGTATGATGCCAGTA
AAGATGGGATACGTTGTGTCAGTGGCCCGGGCAGCTGTGACTCCGGGATG
TTTGTCTCACCACCGCGCGCGAGGGCAAGAACTTCCGGGGCTGGCGTCGA
TGAAGGACCACACCGCGAGGCAATGGGAATCGCGGTCGACGGGAAGTCAA
ACGCTGAAGATTAGGAGGCAAGGTTGACGTTGACGTCCAAGAAAAAATCC
TTGCGGCGAACGAGATGCATAAAGTGGCCTGTACTCACAAGTCTTGGCCT
GTAAGAGAGCTCGGCAAGAGAAGATGTTTGAATAGGGTGATGAGTTTTGG
ATAGAAGGTACCGCGCAGCACTCGGAATCGTCATCGCTAATCTTGCTGAG
GTTACGGCATCGAACATGACTGCTGATGGTCGTGTGGAATAGGTCCCGAG
GACGTGTCTACTTTCTCACTCGCTTTGCGCCACCCCCAAAACACGCACGT
GGATGTCATCATGGAGTACGAATAAAAGTGCTAACATTGTGTAAAACATT
ACAAAGCTGGGGATACACATACATACACGTTTCAAACTGTTGGTTTTTCT
CTTTCAGGCAATTCTGCTGAAAGTTCCGGAACTTTTCCCCCGTTATTGCA
AATTTTGGAAAGGTATTTGATGCCCTGTGTTCACGTGATGGTGTAGTAAG
AACCATCATTTCGCATTATTAGGTAACTAAATTTAATTACTGTCTATAGG
GTAAAAGTGACCCATATCCGAGACGACGGTCAACTACATACTATGTAGAA
GTCACAAGTAAATACACAGTGGTAGTTAACAAACCAAGGGAAATAGTTTG
TAGGGCGCTGTCATCCGACGCCGGGGGTGTGACGTATTCTAAACAGTAAG
TCTCAGTAAGAAAAAACATAGGGTGACCTTGCAGTAATCAACAAGGTGCA
TGGAAGCTTGATTTCCGACCTTTAAGAAGATGTCAATATATGGAGGTACT
TAAGACAGGCTGTATTGATACTGAGGTTAAAAGCAAGATGTTCATGTGGA
TTTCTTATCATTCGAGGACTTGGAAGAATGTTGAGTCGTCGGTGGGGGAG
CGCGGCGACGATATGTATCGGTTCAGACGTGAGAAAGAGGACTGCCCCCT
TTCAACAAAATTCAGATATCACACATCACTTGTTCAGCACTCGTAGATGT
GGTGGAGCGACGAGCGATTGAAGTTCATTATAGATGAAAGTAGTGTCCGT
TTTCCGTTCTCGGAATACGCCTGTGTTTATTTGACACAGCTCCCCTCAAA
A
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Coding sequence (CDS) from alignment at F-serratus_M_contig87:46706..51106-

>mRNA_F-serratus_M_contig87.20054.1 ID=mRNA_F-serratus_M_contig87.20054.1|Name=mRNA_F-serratus_M_contig87.20054.1|organism=Fucus serratus male|type=CDS|length=2244bp|location=Sequence derived from alignment at F-serratus_M_contig87:46706..51106- (Fucus serratus male)
ATGAAGGCTAAAATCAAGCTCATCCAGGCTTACATCACTTCGCTGGAATG
AAGGCTAAAATCAAGCTCATCCAGGCTTACATCACTTCGCTGGATTCAAC
TCTTCCAAGGGCTGGCATTCTCTGGAACCACTATGGAGCGGAGCGTCTGC
AACTTTTAAGAAAAAACTGTGTCAGTTCAACTCTTCCAAGGGCTGGCATT
CTCTGGAACCACTATGGAGCGGAGCGTCTGCAACTTTTAAGAAAAAACTG
TGTCAGGTATAACTACACGGGGGAGGCGTTCTTCACGAAAAAGAAGGACC
GAGGGTTTAGACACGTGACCTCTACGGCGAAGCTTATTATCCGCGATGCG
CTGCCAATCCAGTGCGTCGAGGCGGTGTATCTTGGTGCATTCTTTACCGC
CAACATGCCCCAAGTATAACTACACGGGGGAGGCGTTCTTCACGAAAAAG
AAGGACCGAGGGTTTAGACACGTGACCTCTACGGCGAAGCTTATTATCCG
CGATGCGCTGCCAATCCAGTGCGTCGAGGCGGTGTATCTTGGTGCATTCT
TTACCGCCAACATGCCCCAAATAGATCGATTTCCTGTATGCTTTCGCTCT
TCTCTGGACGGCCGAGTTTTCCGACACATTGTGCTGGCCGTTCGAAGCGG
GGTCACGTGGGGTGCTCTTGGTCTAAGTCGACGCGCCACTCTCATGTACA
AGGAACTCAGATAGATCGATTTCCTGTATGCTTTCGCTCTTCTCTGGACG
GCCGAGTTTTCCGACACATTGTGCTGGCCGTTCGAAGCGGGGTCACGTGG
GGTGCTCTTGGTCTAAGTCGACGCGCCACTCTCATGTACAAGGAACTCAG
ATATCCCTCGTTCTCCAAGCTGATCGCCGACTTTAGGGAGTCCTACGCTG
GAAGCTGGCACCACTTGGAGCAAGTGTGGGTGGGCTTCCCTCTGCCTCAT
GATATATCCTCTAATATACCTGTCAAGTGGAAGATATCCCTCGTTCTCCA
AGCTGATCGCCGACTTTAGGGAGTCCTACGCTGGAAGCTGGCACCACTTG
GAGCAAGTGTGGGTGGGCTTCCCTCTGCCTCATGATATATCCTCTAATAT
ACCTGTCAAGTGGAAGGTCATGCGGGCAAGCGTCGGGACAGATGAGGAGT
GGACATCGGCGGCTATTGGCCTCGACCGCTTTGTGATATGCGCCCCAGCG
ATGTTCGAACATTTTGCGTCAACCGGAAGACTCCCCGATCACCCGCTTTT
GAGCAGCTCGCCCGACGGCAACGAAGGGGGTCGTAGCGTGGCTGCAAAAG
GGGATGGCGATGACCCTAGAAGCTCCCCAGGTGCTGGATCCCCTGGAGTG
ACGTCACCTGGAGCTCTGCCGTACTGGCTAGGGCCAGGTGTGTCGGCAAG
AAGACGTCGCCGCGCGAGCACTGCGATCGGAAGATCGGTAACAAATCAGA
GCAATAGCGTGGGGGACAAGGGTACTCTCTTGGGACGCAGCCTACTCGAG
AAGTATGATGCCAGTAAAGATGGGATACGTTGTGTCAGTGGCCCGGGCAG
CTGTGACTCCGGGATGTTTGTCTCACCACCGCGCGCGAGGGCAAGAACTT
CCGGGGCTGGCGTCGATGAAGGACCACACCGCGAGGCAATGGGAATCGCG
GTCGACGGGAAGTCAAACGCTGAAGATTAGGTCATGCGGGCAAGCGTCGG
GACAGATGAGGAGTGGACATCGGCGGCTATTGGCCTCGACCGCTTTGTGA
TATGCGCCCCAGCGATGTTCGAACATTTTGCGTCAACCGGAAGACTCCCC
GATCACCCGCTTTTGAGCAGCTCGCCCGACGGCAACGAAGGGGGTCGTAG
CGTGGCTGCAAAAGGGGATGGCGATGACCCTAGAAGCTCCCCAGGTGCTG
GATCCCCTGGAGTGACGTCACCTGGAGCTCTGCCGTACTGGCTAGGGCCA
GGTGTGTCGGCAAGAAGACGTCGCCGCGCGAGCACTGCGATCGGAAGATC
GGTAACAAATCAGAGCAATAGCGTGGGGGACAAGGGTACTCTCTTGGGAC
GCAGCCTACTCGAGAAGTATGATGCCAGTAAAGATGGGATACGTTGTGTC
AGTGGCCCGGGCAGCTGTGACTCCGGGATGTTTGTCTCACCACCGCGCGC
GAGGGCAAGAACTTCCGGGGCTGGCGTCGATGAAGGACCACACCGCGAGG
CAATGGGAATCGCGGTCGACGGGAAGTCAAACGCTGAAGATTAG
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