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Homology
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: D7FXS6_ECTSI (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS6_ECTSI) HSP 1 Score: 176 bits (446), Expect = 4.520e-49 Identity = 90/93 (96.77%), Postives = 93/93 (100.00%), Query Frame = 3
Query: 108 MSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT 386
MSS+VEEPLDLIRLSLDERI+VKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPP+RTT
Sbjct: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A7S2FJT0_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJT0_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.570e-44 Identity = 82/93 (88.17%), Postives = 89/93 (95.70%), Query Frame = 3
Query: 108 MSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT 386
++ +VEEPLDLIRLSLDERIYVKCRG+RELRGKLH+YDQHLNMVLGDVEETVTT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPPLRTT
Sbjct: 17 VTMSVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQEIDEDTSEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 109
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A7S2GP21_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GP21_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.460e-44 Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 3
Query: 117 AVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT 386
+VEEPLDLIRLSLDERIYVKCRG+RELRGKLH+YDQHLNMVLGDVEETVTT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPPLRTT
Sbjct: 13 SVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQELDEDTNEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 102
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A4D9CUN8_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUN8_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.790e-42 Identity = 76/92 (82.61%), Postives = 90/92 (97.83%), Query Frame = 3
Query: 108 MSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 383
MSS+V+EPLDLIRLSL+ERIYVKCRGERELRGKLH++D+HLNM+LG+VEETVTT E+DE+T EEI+RTS+R++EMLFVRGDVVILVSPPLRT
Sbjct: 1 MSSSVDEPLDLIRLSLEERIYVKCRGERELRGKLHAFDRHLNMILGEVEETVTTPEIDEETDEEIIRTSRRTVEMLFVRGDVVILVSPPLRT 92
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A833WTF4_JUGRE (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Juglans regia TaxID=51240 RepID=A0A833WTF4_JUGRE) HSP 1 Score: 156 bits (394), Expect = 4.000e-41 Identity = 82/126 (65.08%), Postives = 97/126 (76.98%), Query Frame = 3
Query: 6 TLDLVDLPWGDGLGLNSLR*IAEFNE*EERRHGGMSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 383
++ + L WG S R E E +ER SAV+EPLDLIRLSLDERIYVK R +RELRGKLH+YDQHLNM+LGDVEE VTTVE+D++TYEEIVRT++R++ LFVRGD VILVSPPLRT
Sbjct: 15 VVEFLSLIWGRA----SKRKKGERKEGKERMASEEDSAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRT 136
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A0M0JVC1_9EUKA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVC1_9EUKA) HSP 1 Score: 153 bits (387), Expect = 1.000e-40 Identity = 75/91 (82.42%), Postives = 86/91 (94.51%), Query Frame = 3
Query: 111 SSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 383
S+ V+EP+DL+RLSLDERI+VK RG+RELRGKLH+YDQHLNMVLGDVEE VTTVEVDE+TYEEI++TSKR IEMLFVRGD VIL+SPPLRT
Sbjct: 3 STLVKEPIDLVRLSLDERIHVKMRGDRELRGKLHAYDQHLNMVLGDVEEVVTTVEVDEETYEEIIKTSKRQIEMLFVRGDGVILISPPLRT 93
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A8J5XN36_DIALT (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XN36_DIALT) HSP 1 Score: 153 bits (387), Expect = 1.070e-40 Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 3
Query: 105 GMSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 383
G S VEEPLDLIRLSLDER+YVK R ERELRG+LH+YDQHLNMVLGDV+ETVTT ++D +TYEEI++TSKRSIEMLFVRGD VILVSPPLRT
Sbjct: 3 GASQVVEEPLDLIRLSLDERVYVKLRNERELRGRLHAYDQHLNMVLGDVDETVTTRDIDTETYEEIIKTSKRSIEMLFVRGDGVILVSPPLRT 95
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: K3ZB54_SETIT (U6 snRNA-associated Sm-like protein LSm3 n=9 Tax=Poaceae TaxID=4479 RepID=K3ZB54_SETIT) HSP 1 Score: 153 bits (387), Expect = 1.100e-40 Identity = 77/89 (86.52%), Postives = 84/89 (94.38%), Query Frame = 3
Query: 117 AVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 383
AV+EPLDLIRLSLDERIYVK R ERELRGKLH+YDQHLNM+LGDVEETVTTVE+D++TYEEIVRTSKR+I LFVRGD VILVSPPLRT
Sbjct: 8 AVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEETVTTVEIDDETYEEIVRTSKRTIPFLFVRGDGVILVSPPLRT 96
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A383W7B2_TETOB (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7B2_TETOB) HSP 1 Score: 152 bits (383), Expect = 3.750e-40 Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 3
Query: 102 GGMSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLR 380
G + V+EPLDLI+LSLDERIYVKCRGERELRG+LH+YDQHLNM+LG+VEETVTTVE+D++TYEEI++T KRSI LFVRGD VIL+SPPLR
Sbjct: 2 GEEEATVKEPLDLIKLSLDERIYVKCRGERELRGRLHAYDQHLNMILGEVEETVTTVEIDDETYEEIIKTQKRSIPFLFVRGDSVILISPPLR 94
BLAST of mRNA_F-serratus_M_contig869.20049.1 vs. uniprot
Match: A0A2G5DC99_AQUCA (U6 snRNA-associated Sm-like protein LSm3 n=3 Tax=Ranunculaceae TaxID=3440 RepID=A0A2G5DC99_AQUCA) HSP 1 Score: 152 bits (383), Expect = 3.990e-40 Identity = 73/90 (81.11%), Postives = 86/90 (95.56%), Query Frame = 3
Query: 114 SAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRT 383
SAV+EPLDLIRLSLDERIYVK R +RELRG+LH+YDQHLNM+LGDVEET+TTVE+D++TYEEIVRT+KR+++ LFVRGD VILVSPPLRT
Sbjct: 7 SAVKEPLDLIRLSLDERIYVKLRSDRELRGRLHAYDQHLNMILGDVEETITTVEIDDETYEEIVRTTKRNVQFLFVRGDGVILVSPPLRT 96
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 177.9 |
| Seed ortholog evalue | 2.1e-42 |
| Seed eggNOG ortholog | 2880.D7FXS6 |
| Preferred name | LSM3 |
| KEGG ko | ko:K12622 |
| KEGG Pathway | ko03018,ko03040,map03018,map03040 |
| KEGG Module | M00354,M00396,M00397 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000288,GO:0000291,GO:0000375,GO:0000377,GO:0000398,GO:0000781,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005688,GO:0005694,GO:0005697,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0017069,GO:0017070,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030629,GO:0031974,GO:0031981,GO:0032991,GO:0033962,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046540,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070034,GO:0070925,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0098687,GO:0120114,GO:0120115,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1990726,GO:1990904 |
| EggNOG free text desc. | cytoplasmic mRNA processing body assembly |
| EggNOG OGs | KOG3460@1,KOG3460@2759 |
| Ec32 ortholog description | U6 snRNA-associated Sm-like protein LSm3 |
| Ec32 ortholog | Ec-03_001640.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03041 |
| Exons | 4 |
| Model size | 2070 |
| Cds size | 282 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932542.1059847-UTR-F-serratus_M_contig869:119705..119812 | 1622932542.1059847-UTR-F-serratus_M_contig869:119705..119812 | Fucus serratus male | UTR | F-serratus_M_contig869 119706..119812 + |
| 1690964357.5110474-UTR-F-serratus_M_contig869:119705..119812 | 1690964357.5110474-UTR-F-serratus_M_contig869:119705..119812 | Fucus serratus male | UTR | F-serratus_M_contig869 119706..119812 + |
| 1622932542.2075317-UTR-F-serratus_M_contig869:131083..131137 | 1622932542.2075317-UTR-F-serratus_M_contig869:131083..131137 | Fucus serratus male | UTR | F-serratus_M_contig869 131084..131137 + |
| 1690964357.5704997-UTR-F-serratus_M_contig869:131083..131137 | 1690964357.5704997-UTR-F-serratus_M_contig869:131083..131137 | Fucus serratus male | UTR | F-serratus_M_contig869 131084..131137 + |
| 1622932542.2246501-UTR-F-serratus_M_contig869:131150..132777 | 1622932542.2246501-UTR-F-serratus_M_contig869:131150..132777 | Fucus serratus male | UTR | F-serratus_M_contig869 131151..132777 + |
| 1690964357.580413-UTR-F-serratus_M_contig869:131150..132777 | 1690964357.580413-UTR-F-serratus_M_contig869:131150..132777 | Fucus serratus male | UTR | F-serratus_M_contig869 131151..132777 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932542.128088-CDS-F-serratus_M_contig869:119812..119917 | 1622932542.128088-CDS-F-serratus_M_contig869:119812..119917 | Fucus serratus male | CDS | F-serratus_M_contig869 119813..119917 + |
| 1690964357.525831-CDS-F-serratus_M_contig869:119812..119917 | 1690964357.525831-CDS-F-serratus_M_contig869:119812..119917 | Fucus serratus male | CDS | F-serratus_M_contig869 119813..119917 + |
| 1622932542.1486955-CDS-F-serratus_M_contig869:130025..130121 | 1622932542.1486955-CDS-F-serratus_M_contig869:130025..130121 | Fucus serratus male | CDS | F-serratus_M_contig869 130026..130121 + |
| 1690964357.5428183-CDS-F-serratus_M_contig869:130025..130121 | 1690964357.5428183-CDS-F-serratus_M_contig869:130025..130121 | Fucus serratus male | CDS | F-serratus_M_contig869 130026..130121 + |
| 1622932542.1645513-CDS-F-serratus_M_contig869:131002..131083 | 1622932542.1645513-CDS-F-serratus_M_contig869:131002..131083 | Fucus serratus male | CDS | F-serratus_M_contig869 131003..131083 + |
| 1690964357.5588262-CDS-F-serratus_M_contig869:131002..131083 | 1690964357.5588262-CDS-F-serratus_M_contig869:131002..131083 | Fucus serratus male | CDS | F-serratus_M_contig869 131003..131083 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig869.20049.1 >prot_F-serratus_M_contig869.20049.1 ID=prot_F-serratus_M_contig869.20049.1|Name=mRNA_F-serratus_M_contig869.20049.1|organism=Fucus serratus male|type=polypeptide|length=94bp
MSSAVEEPLDLIRLSLDERIYVKCRGERELRGKLHSYDQHLNMVLGDVEE TVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPLRTT* back to topmRNA from alignment at F-serratus_M_contig869:119706..132777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig869.20049.1 ID=mRNA_F-serratus_M_contig869.20049.1|Name=mRNA_F-serratus_M_contig869.20049.1|organism=Fucus serratus male|type=mRNA|length=13072bp|location=Sequence derived from alignment at F-serratus_M_contig869:119706..132777+ (Fucus serratus male) GCCAAACCTTAGACCTCGTGGATCTTCCGTGGGGTGACGGACTAGGATTG
AACTCCTTGAGATAGATTGCCGAGTTTAACGAGTGAGAGGAGAGACGACA
CGGAGGGATGTCCTCTGCAGTGGAGGAGCCGCTTGATCTGATACGCCTCT
CGCTAGACGAGAGGATTTACGTCAAGTGTCGTGGCGAGAGAGAACTCAGG
GGCAAGCTGCACGTGAGTCTAGTCGACGTTTGCGTAATGAATAAACTTGA
CTGGCGCCCATCTTCAAACTACTAAAATTGTAGATGCTAGTGTGTATCCA
ACCAGCAGCCCGCTACACTAGAAGACATTTCGAGGTAGACTACAGATCCT
CGGTAGCTTTGGCTGATACACGGAAGAGTTCTTCAAACACGTTATCTTCT
GTCTGAGCCGCGAGCCTGCACGATGATGGAAATCAGTGGAGGTGGAAGGT
TTGCCCCTATCTTGTACTTTTATATTATACTGGTAAAAGGGAGTAGCAAA
TCAAATGTGTACGTACCCAAATATCCTCACAACGAATTAGCACAAATCGT
GTAGACTACTATTATATTAATAGGGCCTAGATGTATAGTATTTGCAGGAG
CACTGCAGTATGTCCTTGCAGTAACTACCGCGATATCAGTAGCCAGGCCT
AGCTTGTCAAATGTCAAACCTGCTCGTGGTAGCAAAGAGGTACGGAGGTC
AACGGGTCACATCATGGTGACGGTATCGTACAGCAGCACGTCGAAGATTT
TCAACTTTCGAACGTCGCAACTTTTGGGGATATTTTCCGGGTGCATGACT
GCCTCGATCGCGGTTGCTGCTACTGTATCTAGATCCCCACCTGCCGTGCC
AGACTAACGTGCTATCAATACCATTGACAGCAGTCGTCCAACTCTTCGCG
AGCACCACCTCTCTTCCTTTTCGATTTGATGCTTTCTATTCAGCTGCTGC
TGCTTCTCTAAACTAGCTGCTTGAGCGCGACTATCGCTGCGAGGGTCGCC
TTGGTACAAAACATTTTACATTTTCATTTCTTTCGTCAGAGTAGTGAATA
CAACATGCTACAAGCATTTCGTTCTGTTGACCTGTCGTTTGTTGTTTGTA
GCTGGCGGACCGAAAACAATCGTTCTGGTACGTGTGTGTATCCCAACCCA
TACGACCTATCGATCGTCGGGTATATGTTCAGCTGACCACGAGCAGGATT
GGCAACCTTCCCAGGTTGATCCATTCTCTTGCTGTATGTGTGACCATACA
TATGCAGTGGCAATGGGGAACATGTTTTTTGTACCTCTACAATTTTGCCT
TTTGGCGAGGAAACCCTCCCGTTGCTTTTTGTTTGTACACATAAATGAAG
TACTTTTACCGACTTTTTGCCCATTTTTTTCCGTGTACAACGAACGCACT
CGGTCGCCTTCCTGCTGTTGCGCATTTTGGCTCGATTCAACGTACCATAA
TAATAATAGTAATACTCGATTCAGGAAATTTATCTCATTGTACCGCAAGT
ATCGATCGGAGTCTTGGCAAAAACCCCCTAGACTGACTTTCCAGGATCAG
GATCGATTGCTCCACAACCAAGAGGGTTATACTGGTTATAGTATAGGTGC
CAATGCCGAAAAGGGCGGTTTTCGAAAGATCTGATCTCGTCGAGAGCTTT
CTTTAGACGTATCGGTCGGCGTTCACATCCTCTTGGTTGTGGAGCAATCG
AGCCTAGAATGTCAGTCTAGGGGGCGTGCCAAGACTCGATACGTACGGTA
TGTATGGTCATCACATGTAGCAAAAGTAAGGATCAACCGGGTAAGGTTGC
CTGCCAATCCTGCTCCTGGAAAAATAACACATTTCCCTGTCTGTCCGCGT
TCGCGCCTGAGAATCTGGTCTCGCGAGACGGGTTCGGCAGTCCCATCCCG
CGTCAGCCTACTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTGAA
GGATTCCTCCCGAGTTCCGCGACGGCCTCCTTTATTTATTTAAACCGCCA
TACGCCATCGGGTCAGTCCCGAGTCAATGGGGTCACGCAATTGCGTACCG
ATGTCGTTCACTGCCGAGAGTCCGCCGACACAGTAAACCTTAAGGTAGTT
CCGAACGAGTGCCTTCTTGGCAAGGTCACCATGGGCCATATGCGCCTCTC
TTTCCGACACCCACTATTGGTATGAAGTGGGTACGTATGTTGAAAGTATC
GGTGGGGTGCAACTGATTTGATGACGATGCGCTTTTGTTGCCAAGACTTT
GGAACCCGAATATAAAACCTAAAAACCACCACCTCTACGTTACCCCTATT
GGCTATTGGCGTCCACCGCCATGAAACATGAAACATGAAACATGAAACAC
GCAGCTCTACAAATGGTATCAACTAATGACTCTATATTTGCTGTGTAACG
TTGCCGTGTACCGTTGCTACGCTTTCATTTCAACCTAAAAACATTAACAT
TTCATGTGCGCCGACGTATCAAAAAGTACCATTCGTTTCTTCGAGGTTTG
CTGTACGCAGGGGGCGGGTTGTGGATGCACAGCAGCGCGCGGAAATAAAT
CTTTACTCGTATTCAATAGCTCGATCGAGTACTTAGCACAGAAGTCAACA
CATATACCACCAGTGCTTTGCTCGTTCAACTGAGACGAACGCGCTCCCTT
GCGCGGGTGGGGTCACGCCACGCCGCGTCCCTGGTGTGTGTGTGTGTGCC
CACAGCAAACATTTGCGAGATGGTTGGGGTTTTTGATGAACCCGCGAGTA
CCACTCTGAATCAATCGGTTGATTGCGTCTTTTTGCCCGGCCTGGTGACC
GCCCGATGAATTGCCCATTTTCTGTTTCGGGCACGCAAGTACGGTCACCG
ACACCGGACGGATACTTTGCTATTTTTTCGAAGCCTACAGAGTGTGGAAC
GCTTGATGGTGTGAGGAGGCACCAGCGCACAGCTCGTAAGAAGCACTTCG
CAGAGTTCAGGAGCTTGGATCGCGACCCTTTTAGACAGGCCAAGACCGTG
CCTTAACACACATTCTGCGTCCGATCACGTCGTGTCATTGTGTACATTTT
AGCCGCGGGAAAGGTGTAAATGAAGAATGGTCCGGGCCATGGAGAGACCA
ACTTAAGAGCTCGAGAAGTAACGAGCGAAAGACGGCCATTTCTAACCCCA
AACACGAGCATTTGTGTTTTATCTCCCGATAACTTTGTCATCAATGGTGT
AGGACCGGCGCCCCCCCCCACTTGTTGGCGACTCTTTCGCGTGGACTCGT
CAACGCTTTCGTCCAGCCCTCCAGTCTTGGTGTATTGATTTATGAATATT
GAATTTTCCATCAACATGCTATGACCACTTCACATCTGTAGTGGGTGTGG
GAAACGGGAGGCGCACATTAATTGGTCATAGTCCATGGTGACCTGTAAAA
TGGCAGCACCCGTTACTGGAACTACCTTGAGGACTGCTGGCGCTGTGCCG
GCGAACTCTCGGCAGTGAGCGCCGTTGGTACGCAATTGCGTGACCCGATG
AACTCGGGACTGACCCAATGGCGTATGTCGGTTTAAATATATAAATGGCC
GCCGCCGCCGCGGAAATCGGGAGGAATCCCGTGAGTAAGAACCAGATTCA
GCTTTTGAGTATGGAGAATGAGCAGGCTTACGCAGGACGGGACGGCTGAA
CCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGCGGACAGGGATTTTT
TTTCATTTTTCCTGTTGAGCTGACCTCGAGCAGGATTGGCATCCTTACCC
GGTTGATCCATCATACTCTTAAGCTATACCAGTATGTGATGACAATAAGT
GTTTAAAATAAAATCTGAACGCATCTAAATCTTCTCATCAGTCAAATGGT
TTAGGTGGGATTGTTGTTGTTGTTTCTGACATTCAGCGTGTTGGTTGCCA
ACCCGAAAAATTACTTCACACGGACGGTGGCCAGTCCCGCTCGTGGTTTG
CTGAACAGTGAAGAAAATAAAAATAAAACATCTGGCACCCCCCACCCCCA
CGCTGCTCGTTCGGAGAAAAATAAAAATTGAAAGTCACGCGATGCAACTG
CTTCCCTATTTCCCTATCCCCGTTCTTGCCTTGTGTACCTGGTATATTGT
TCTCGCGACGTGGGTTCAGCCGTCCCACCCCGCGTCGCCCCGAACGGTCT
GATTTGTGGATTCAACTGGCAGTGCACCGCCGATGCCATCGGCTATGCCG
TTATGATCACAACACGCCTGGACTCCTTACCGTCTCCTCACTCACTTCCA
TGGTTTGGGTCCACCCCGGCCGAGAGGCAGTCGGGGTGTAGCAGTACAGT
ATAAGGGTGGGCTTCTACCCGACATGATACTGTTGACCCAAGGTTCCTAC
CATCGGGGAACCCGTTTAAATACCATGTACAATGGCTTTGTCTTTACAGC
CTACTATGTAGCAGTATATTGTTACTACCATATTTGATGATGTACTACAA
TGTTTTTGTTTTTGCTGTTTTTATGATGTCCCTGCATGGCGATTAATGTA
AGTGTACAAACAGTATAACGGTGGGGTTCTCCCCGACACTAGATACTGAT
GACCCAATGTGACTACCATCGAGGAACCTGTTTAAATGACATGGAGAGGT
TTTGTATTTGCAGCCTATGATCCATCCCACTAGAAGGTTTTGACACTTTT
CCCGATGCTCCGAAGGTCTAGGCGCGTTCTGATTTTTCTTTCAAACACAC
ACACACACACACATATATATATATATATATATGTACGTGTAAATATATAC
GTACCGTATATATTAAAACGCCCAATTTCATAACCCGCCGCATTTCATTT
CTATGAGTTACGTTTCCTTTTATCTTGTTTTTTCTTTTTGAAAGTGAAGG
AAGGCTATCTATTACTTGGTACTGTAATAGACACGACTGCAACAATGAAT
CGACGACCAAAACTTCCCGATCGTGATCGTGTGTCCATCCACAAAAGTAA
CAAATAATGCAATGGTGCAATAAGGGAATAAGGCAATAATGCAATGAGGG
AGGCAGAGAGAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGC
AGGCTCTAAGTAGCACAGCTCGACCAAGCTGCAGTTTCTTTCCACTGCAG
AACCATAGACAGTTAGGCAAGCGTAGAACCTGCGCAAGCGTCACCACAAT
CCTGTGTACGTACACGAGACGGACCGAGACCTGACCTGCGCAGCGCCTAC
TAACAGATTAATTAATATATTAATATTTTAATAGGCATGTGGAGGCGTCA
CGTGGTGTGCCCTCCCGACCGTCCGTCTATCTGTTCTTTTTGTTCTTCGT
CGTAAGCGCCTTGCGTGAAGAGTATACTATACAGTATATACTTTCCTTGC
GTATCAGCAGCGTGGGGGGAAAGTGGTGAGCAGTTGTGCGCTTTCTCTTT
TTCATATTTCTCTTTTCCCTGTTGAGCAGACCACAAGCATGTGGTGGACT
GACTGACCACCGTGTGAAGTTGTTTTTCGGGTTTTAGCGCAACCAATACG
CAGGTATTCATCATTAAGTTGCACCTTCTCCCTCCGAAACCTGGTTTTGG
GGGACGACTGTGGGAGGGAGGGTCTTTCCGGCGGGTGTAGGGCTGGGCTC
ACGCATTGAGAGATACGGCCTACTGGCTCTCTTCGCGATTCAGCCGTTAT
GGTCGGTTGAGACGCGGCGGCGGTATGGTAGGTTGAGGATGGTGTTCACC
AGGTGCGTCTATCTTCCGAGCGCCATTTTGGTGCCCTTCGGGAGGTGGAG
GCACGCGAGGGACGAGGGGGGCACTGTCGCGGAAAGCTTGGCCTATGAGG
TGAGTACGCACCAGATTCGCGAGGGCGGAGGGCAGCTCGATTGTCGACGA
GCCAGGGTAGTGCCGAACCCCTGTGCGCAAGATTCAAAGGCGCCAACTGG
GAGGTTTCTGAGGGAAAAGGTGATCTCTGACCACGGTCTGTTTTCATCCT
ACGTGGGCCAACAAGGAGCGTTGAACGGTTAAGATACGTGGGAGCTTTTT
TCAGGGTTGCACAGGGCATTGGGCGCTTGGATGCTGGCTCGCGCGCCGGC
TTTACTAGCTCAAGGCCTCTACCGCCATGGACCTCGTTATTTTTTTCCTT
ATTTTTGCATGACGTGTGGCCCTGACGAACTTGGACTTGTTGACCAAAAG
TGGTTGGAGCGTGATTTGTCGGGTTTGTTACCGAGAACACCGAGAATGCT
GGTCACGGGTAGACGACAACAGTCCGAGTCGATCGAGGCTGCTCTAGGTA
TGGAGCAAGGAGGTTTGATGAACCGTTTTGACGTTGATCGGTGCCATTGC
TTGTAGAGTGCCGCATAACTTGTCTTACGTGTAACCCTTCGAGAGCTAGA
AAACGTTTTTGAGTAACTTTTGATGACTTTGTTGGATGGGGCAGGCAGCA
CATCAGATAGTCTTCTTCGTAGCCCTTGTAATTCAGATTATGATTATGAG
ATACCTGGCAGCACTCCAGACTATGGCAGTAGAAACTGTAGTTCGTACCC
AAAGACATCGTAAACTTGACGCCGTCAAGTTTACGATGTTCTCGGTTGGT
TGGATCTGGTAAGGGCTTTGTCGCAGTTTGGTTCCCTGTGATGTTGGAGT
AGCGGGTTGTCACCATGGCCGTTGACCTTCGCACCACTTTGTGACCACGA
GCGGGATTAGCATTTGATAGGTCTATGGCTGACTTTGTTTTATCAGTTTC
TTCAGTTGGAAGGACAATAAATACGTACGCTGAATCTGTGAATCAACAAA
AATCAACAGCAACGACGCTGAATGGGAGAAAACAGCAATAATGTAAAAGC
GGGGCATCGCGGGCTCCCAGCCAGCGAGCCTGACCACAAATAACCCGCCA
ACGCTGTACCAGAGGCTGGCTGTAAAGGGGCAACGAGGCGCCAAATGTGA
GCTTGGCGGTTTGTATGCCTACCCCATCTGTAGCTACAGTAGTATAATAG
TATAATACCCCACTGTTCCGGTAGCGGCACCGATGATATGATAGGTGTCA
TTAATATAATAGTTGTCGGCCAAAGCATTGGACTACTGAATCACGTGACT
TGAGAAGTCTAATGGTTTAGCGCTTCTCGCTCACAATTGGTGCCTTGGAG
GTCTTTCGGCACCAGCTTCCTTGTCGCCGCTGCTATTGATATATATCTGA
TATCTAATGTATCCCGTCGTGGGTGCTCAGGACGGCCCACTACGTGGATG
ATGACCGTTTATGTCAGTTGCTCAACGAAAGAGGCATTCTGTGACATGAA
AAAAGTCTGCGTACAAGTAACCTGACTTTTTTTTATTTTTTTTTATTTTT
TTACTGGGGTTTCAATTACTGTAATTGATTGATCGATCCCGAAAGTTTGC
TACCTTTGGGAGCGCTGTCAGGTTCCTCCTGGCGACCACCAGCCAATGAA
ATGGAAAACTATGAAATTGACTCGTTGCGGGTTAAGACAGGCTCTTACAT
GGCCTCACCTCACCACCACACCATTATCGCTTTCAGGGAATAAAGGAAAA
TATATATATATACGTTACTCCTGGGTGGGCGCACCAACGCTCATGCTACG
GTATCAACACGCCCAATATTATATAACCCACCGCGTTTTATTTATTTTCC
ATTTTTTGCATGTTCGCTTAGACACGGGCGTTACCAATCTCAAACCGAAC
AACGGGCATTACGGAACACAAACCGAACAACGGGTTTTCTGTCCTTGTAG
CCAATGTTCCGACCCGACTATTGTTGACAGGTTTAGATGCGTTTCAGATT
TTTCTCTCAATCATCCCGGGAGGGGTTATGCACTCAAATGAGCGTCGCAA
CGAGGAGTCAGATCCACTACAAGTACTACTGTTGTAAAATGTATCTTGAC
GCGACTCAATTCCTTGGTGAACCAGCGAGCTGTCGCAAATATATACTCCG
AAGTATTTTTTGAATGTGGCGACGAAAACCGGTCTTTGGGATGGGTCGCG
AGGTTCCGCCTCATTTTTATTTTTTATTTTTTAATGCATTCAATGCTGGA
CAGGAAGCAGCTAACGTTTTGACATTTTTTCTTGTGACTGTCCAGTTGGA
GGATGCTCAGAAAGTATAGGCTAGGCGCGTTCTGTTTTTTCTTTAAACGC
TTCCCTTTCTCTTCGAGAATAGTTAACTTAAACACGTGCACGAGGAATTT
TGCAGCAGAGGATGTCCGTACGTTTTTTGAGACAAGCGTTAGAATCTTGG
TTCCCCGCGTCCGTTTTCCGTCCGACGAACTCAAAACATAAAAAAAAACA
CGATCTAGCTTTAACTAATCACTGTACAGTACTGTACCGTGCTCGCGGTA
TGTAGCTGTTGTTCAGCCCAGGGCTTCAGCAGTGTGTAGAGTTGGTTGTA
CATGAAGTCTATTGAGACAGTCGGGGTAGAGACCGCACCATCGCCTTCGT
TATCTCTATAAATAGTATATTAATATTAATATTTTTATTTATATTAATAT
TACTATTATTATTGTTATTTAATAGTCTAATTATAGCGATAAAGCAACGC
AGCAGCTTTTTTTTGTCATTTTTTTTTGTCATTCACTTGAAGACGATGGG
TCTCATTCCGTCCTGCCTGTGGTCACTAAGGATCTCCCCTTCTCTCCCCG
GTTGACGCCTTACAACTCGTCAACCAATGATAGAATTTTACTTACTCACG
TTCCCACACTCTCCTTTACGGATGAAATAACACAAATCCTGATTTAGCCA
AGAATCGAACTCAGGACTTCCGCACTAGCAGGTGTGCAGGTTACCTACTA
GACCACTCGGTCGACGAAGGGCAATGGTATTTGGGTCTCTCGGGTCCAAG
TGATGTACGTTTCACCCGCCCCCCCCGCCCCCCCCGCCCCCCCCGCATGT
TTCATCATGTACATAGTACCGTTGCTCAATCCACTGAAATATAAGTGAGG
ACTGTTACACGTGTACCCACAGACGCACACACACCGGTCAAAGCAGGGAC
GGCGGGGCTTCGATCGCTGCTGATGCTGCTGCTTGTCAAGTACTATGTAT
CTGGGGTTTAGTTTGACTGGAGGCTCACAGGGGTCTATAAAAATTGAACG
GAGGCTGTTAGCCGTGTCCCAACACGAAGCTGGATGGAAGCTCACCGCAG
TTGGTCGATACTACACGATACTAAACGAAATATGGATGGAAGCTGCACGA
GCCAACCGCGAGAGCTGGGATCAACCAGTCTTACATGCGCGTGTATCGCT
TCCAACGTGAACTCGGCATAGTCCCGATGCTCAAAAGACACCCCGCCTCG
ACTGCGCTTCGGCGGATTATCACCGTCATCCTTCTCGTCAAGCATCTTCG
TACTCACAGTCCATTCCTGCAGTCTGAACGTCACAAGAAAACTGGGCCAA
CACTCGCGACGCCCCTTGTCTGACTACAGTACAGTACCGTACAGTTCTAT
TTAATACAGCACCGTACTATAGTACAGTATGACATACTTTTGTCGACGGT
ATCGTGCGCCTTCCTTCAAGTCTCCCGCGAGCGAGTCTCTCCGTTGCCAG
TGAAGGAGCAGCCCATATAAATATATATATATATATTGTATAAAGAGCTG
AACGCGAAAAATGGCGAGAGGCTCCCGCAACTTCAGGGAGAGCAAAGCCC
ACCCCCCTCCCCTCCTCCAGCCTATTATAGTCTCCTCTAGAGTGACCAAC
TCGTGACGTCTTGTAACGTGATGTGCACATTGATTTTTACATTGTTTAGC
CTGTTCCATGAGTGTTGGTTGGTGTGCTGGTGAGGTAAGGTCTCACTCGT
AGCTTCTCTTACCTCCGTGCCGCATTTGTACAGCTTACCTTACTGTGGCG
GGCGACCTCAATCCTCGACCTCGTAGTGCGATATATCGGTGCTGTTTCCC
AACGCGTCTGAGATGATGGCTGTCGTTTGTTCGGCTGCGACATTGCCGAG
CCCTTCTTCAAGATCCTCTCGTCCGCCTCCTGTTGTTATCAACAATAAGT
AAGGGGAGGGGAAAGGGAGGAAGCTTTGCAGCTACGGTGGAAGCGAGGGT
AGTGTAATAACGGTAACGGATGGACAGACGTGGATTCGAAGATGACGGGT
CTGTCCGACGCACAAACGCGGGGCTTCGTCTTTGACATAGCATGTAGCGA
TTGGATGTACCGAGTGTTCATTAGTGAGTATTGAAGCAGTTGTCATGTTT
ATACCATAATATAATGACTTGAACTCAACAGTTTCTGGTACCCGTGGTCT
GAGAGACGGCGGCGCGCAGTCTCCTTGTTCCTTGGCTCGGCGCCCTCACG
GCATCCGCCCTCATCAACGAAAACGTTCATAATGCGCTCTCTTTCTTTTT
TACGTGCCCTTGCGCGCCAGTCCTACGATCAGCACTTGAACATGGTCTTG
GGCGACGTGGAGGAGACGGTCACAACCGTCGAGGTGGACGAAGACACGTA
TGAGGAGATCGTGCGGGTAAGTGTCGGACTTGGACTAGATGGACTAGATG
GTGCATTTTGAGGATTTCACGGAATAGCTTTTGCCGGGCATTGATGATTG
ATCCTTGATCCTTGATTCTTGACCCAATCCACTTCTTTTTCGTGGGTGTA
GCCTTGACAGCTGCTCCAGTAAGATCGCTATTATAGAAGGGCGTGCGGCA
TCCTCAGGCGAGCGTGGCACAGCCAGAGGCCCCTCCGGGCATGTGATGCG
ATTTCTGGTTTTGCTCTGACGACGATGCGAGCGCTACGATGAATAATGAG
GTCTACTGAAAGTAAGATAACGAATACCTTACGCGCTACCGCCTCCCTAC
GCATAACGTGTACTGTACTGTGGGGTGGATTTAGGCGTGGCCAGTTCGTC
GCGGTCTAAATAGATGTTGACAGCAACACGCGGCAGTTTGAGTCTGATGC
TTCATCGCGCGTGCCAGCCTTTTTATTGTTGTTGCCTCTAGCCACGACGT
TGTAGCTTGTGTCGACGACGTGTTGTTGTGATGGGCGCGATTGTCGGATT
GTGCACCCGAACTGACTACTGACGTTGTTCCGCGGCCGAATCGCTCACAT
CGTACTGTACAGTACTGGATTTCTCAGTATATCTATCTAGGCGCTTGGTA
AACTTGAAGCTCTTGTCCGAAGGTCGTTGTTTTGCGTATGAAGTCTGCTC
GGCTCCGGCGCGCGGCTTGCCTAAGCGTGAGCTCTCGACGGTTACCGCCG
TCGTCTGATATTTGGTTCTGCGTTCGCGCGCTGTGTAGACATATCATACA
CGCCTTTGTCCCGTCTGGTCGTGTTTCCGCCTGAAACGTCACACCTCCCG
CCCCCGACCCCTTCGCTGTCGCTGTCCCTGTCCCTGCCTTGACGCAGACG
TCGAAGCGAAGTATTGAGATGCTTTTCGTTCGCGGGGACGTGGTCATCTT
GGTATCGCCTCCTCTCCGGACGACATAGACACACACCTTGATATCTACAC
ATGCGTACACATACACAATACATATGTTTACTTTTTTTTTCTGTCTTTTT
TTTTCTGTCTTTTTTTTTTTTTGAATATTCTGTAGCCTCAGAATAATATT
GGCCTTGGGTGTACCACAAAGGAGTTCAAAACCAGGTGGCTTTTTTAACT
CCGTGCAGTGTTTTTCTGTGTTTTTCTGTGTGTGTGTGTGTGTGTGCGCG
CGATTGTCTTTGGTTGTTGGTTGTGGCTGTTGAGAGATTTTATAGGGACA
TTTTCAAGGAGAGATGGATAAAGAGATGGAGAGATGGATAAAGAGATGGC
GGAAGGAAGAAACTGTCCTGAACGTTGTGGTTGTGGTTGAAATGTAGTCG
ACAGAACCAAAGAGTTTTCACCCACACAAGATCGAATAAATGGGTAGCCC
GTCGAACCTTCCTGGAGAGACAGGACAGGAGAGGAGAGGTTCGTGCTGAA
CGTGGCCTTGGTGGGGTGTGGCTTCTCACGAAGCGCTTATTCCCTAGCGT
GTGGTGGTGGGTCGCCCTTCAGCGCGACGGACAATTTGGCATTTCAGCTA
TCTACGGGGTGGACTGCTTCAGGGTGTAGCACACGAAAGCGGTTTCGGGG
GCATGATGTGGAAGAGATGCCGATCGAGACTTGGACGCGTGCATACAGGT
GCATGGTGTGGATGTGTGGATCTAGCCAGCTGCAACAGCCGCGCAGCATG
CAGGAATCTACTTGTGGGCCCGGGTTGTGTTCGTTTTCTTCTCGATTCCA
TCCCATTCCATTCCGCGTGATTCTCTGTTTCAACAAATTTACCAGCGAGA
TTTTAGGATCTTGTTTTTGTTTGTTTTGTTTGGTTTCACGGAAGCGGGCC
GCGACGACTCTTTTGCGATAGTAGGCAGTAGATGTATTTGATAGTCCAAC
CTTCTTCGCTCGAGCACCTCCTCCGAAATGCACGCGTGAGACACGATGTT
TGTTTTTTTGGGGTTCAACCCACTGTTTGATTAGTGCATTCATAATCTGT
ACGTCGTACGTTTGAAAGTTTTAGGTATCTCCATCCTACACTAGTTTCAA
GTATGAATATGCTTCCGTAGGGTTTTTCCGGTTTGAGGTATGGTATCGGT
ATGTACGTCGGTCAACCCCGTCATAGGTACCTCGACAAAAAAGGGTACAC
ACATATCGGGTATTCATAGATCCTTATTTCGTTTCTGTACGCACTGAAGC
GTTAGATCACAAGCGTTTCAGGGGTTTTGGGAGAGAATGCTTGACCCTCA
TGAAGTAGAGCTACGAGTTTGCCGTGGTCCGTAGTGTCATGAGAGTCGGG
GCACGATTGCTGTCACCGTGGCGGGACTGACTGACTCGCTCTATTATAGG
AGTCTATACTGTAGCGGGTTCGTCTTGGAATTTGGAAGGACGCAGGCAGG
TGCTCCCCTACAACAAGGGTATCACTTACAACATGTATAGCATCTCCGTA
GATGACGCCATCATGTCTAACCTCTCGAAAAATAATTGCTTTTTTGTTAC
GTCTCACGCGTGCTGGGATCAGTCACCTCGTCTTGCGCGGCAGCAGCAAA
CGCCATATAGACCTATTTATGTCATCACAAAATACGGATGGAATTTGAGT
TTACCGCCCGCTCTCCTTCCCACCCCCACCAGAGCGGTGCCTGGCATCGT
AGATGATGGTGGGACGCCCTTC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig869:119706..132777+ >mRNA_F-serratus_M_contig869.20049.1 ID=mRNA_F-serratus_M_contig869.20049.1|Name=mRNA_F-serratus_M_contig869.20049.1|organism=Fucus serratus male|type=CDS|length=564bp|location=Sequence derived from alignment at F-serratus_M_contig869:119706..132777+ (Fucus serratus male) ATGTCCTCTGCAGTGGAGGAGCCGCTTGATCTGATACGCCTCTCGCTAGA CGAGAGGATTTACGTCAAGTGTCGTGGCGAGAGAGAACTCAGGGGCAAGC TGCACATGTCCTCTGCAGTGGAGGAGCCGCTTGATCTGATACGCCTCTCG CTAGACGAGAGGATTTACGTCAAGTGTCGTGGCGAGAGAGAACTCAGGGG CAAGCTGCACTCCTACGATCAGCACTTGAACATGGTCTTGGGCGACGTGG AGGAGACGGTCACAACCGTCGAGGTGGACGAAGACACGTATGAGGAGATC GTGCGGTCCTACGATCAGCACTTGAACATGGTCTTGGGCGACGTGGAGGA GACGGTCACAACCGTCGAGGTGGACGAAGACACGTATGAGGAGATCGTGC GGACGTCGAAGCGAAGTATTGAGATGCTTTTCGTTCGCGGGGACGTGGTC ATCTTGGTATCGCCTCCTCTCCGGACGACATAGACGTCGAAGCGAAGTAT TGAGATGCTTTTCGTTCGCGGGGACGTGGTCATCTTGGTATCGCCTCCTC TCCGGACGACATAG back to top
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