prot_F-serratus_M_contig869.20047.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig869.20047.1
Unique Nameprot_F-serratus_M_contig869.20047.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length782
Homology
BLAST of mRNA_F-serratus_M_contig869.20047.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.380e-62
Identity = 213/549 (38.80%), Postives = 249/549 (45.36%), Query Frame = 0
Query:  206 GHEAHVRCLAIDSRGELLLTGDESGSICARLLHFDKGGARDDGDGGGDPGDPVTNERLLGETLGDDGEYVKVVSEAHAGGVFAIRHVEDGDAGGNVKLFVSGGAGGAVRLW-GVTVAVPRVHV---GPHEDL-LEVLLLTDMLVGGFQVTSLAVSPSYRVPLVLAGTAEGTVFAFRMPLRRAEGGGAPGSGDGDAP----PGVGEWEKG---------------------LGVLAMKFEHTSRPVVAVSCSLEQELIATADADGIVRTYRPRSPARAGDARLPQQGLQRSAGGATNAERGVGPVGAKEGSMASTTSTTTRLFDLVVECRLGSRTVSCQFALDRMEEKAEEAKEEVFVVGEEEKYSPRRQQQHKTEVLRTCTRDGSLRV---CSLPTRPMRPAPQQPRSPFTPPGFVGTSEGVTPSSSPAAAPAGPAVP---------------------SLVAADYQESLDRASRQPYPGVGRGVPEEEAGEKDREFGVGGAAGRRSRAAAEGGGSAVRGEAPLPGARPATPRRVSFAPAEEVYQIEDP 700
            G    V CL+ID RGELL+TGDESG+ICARLLH   G    DG   G      + E              +VV EAH+G V AI HVE G    +  LFVSGG GG VRLW    +   R  V   G   DL + V LL DMLVGGFQV+ LA S S  VP+VLAGTAEGTVFAF +   +          + D P    P VG  ++G                     LG + MKFEHTS PV  V CS EQELIA  DA GIVRTYRP  P        P  G   +A  A  A R                      F+LVVECRLG+R VSC+F                   G E     RR    + EVLRTCT  G LR+    SLPTRPMRP P    +P   P +    E + P   P+ A                            ++ A   QE+ D     P     R    +  G      GVGG  G            + RGE PLP ARPA PRRVSFAPA++VY++EDP
Sbjct:   12 GRRQKVGCLSIDRRGELLVTGDESGAICARLLHH-SGNRSGDGTACGSS----SVEGXXXXXXXXXXXVAEVVREAHSGEVLAISHVEGGAGDDDPALFVSGGKGGVVRLWKAACLERSRETVAAGGGGGDLEVHVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDREAEDDRPTVGRPTVGYGDRGSRGGSVASGRERPDNAVGRTELGAVLMKFEHTSEPVERVCCSQEQELIAATDAAGIVRTYRPLLPRGGSTDNNPSDGAPPTAAAAAEARR----------------------FELVVECRLGARPVSCEFGSGPR--------------GVESGGDRRRGVGGEGEVLRTCTARGVLRLWPTASLPTRPMRPPPSS--APTRLPDYH---EALAPLPHPSNAGTDXXXXXXXXXXXXXXXXXXXXXXXXXAMAAGTEQENRD-----PSDPFSRWTAIDAKGRGPGLVGVGGGEGGEEEE------PSARGEPPLPKARPAAPRRVSFAPADQVYKLEDP 503          
BLAST of mRNA_F-serratus_M_contig869.20047.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 8.050e-58
Identity = 205/544 (37.68%), Postives = 234/544 (43.01%), Query Frame = 0
Query:  211 VRCLAIDSRGELLLTGDESGSICARLLHFDKGGARDDGDGGGDP---GDPVTNERLLGETLGDDGEYVKVVSEAHAGGVFAIRHVEDGDAGGNVKLFVSGGAGGAVRLWGVTVAVPRVHV----GPHEDL-LEVLLLTDMLVGGFQVTSLAVSPSYRVPLVLAGTAEGTVFAFRM-----PLRRAEG--------------GGAPGSG-DGDAPPGVGEWEKGLGVLAMKFEHTSRPVVAVSCSLEQELIATADADGIVRTYRPRSPARAGDARLPQQGLQRSAGGATNAERGVGPVGAKEGSMASTTSTTTRLFDLVVECRLGSRTVSCQFALDRMEEKAEEAKEEVFVVGEEEKYSPRRQQQHKTEVLRTCTRDGSLRV---CSLPTRPMRPAPQQPRSPFTPPGFVGTSEGVTPSSSPAAAPAGPAVPSLVAADYQESL-----------------------DRASRQPYPGVGRGVPEEEAGEKDREFGVGGAAGRRSRAAAEGGGSAVRGEAPLPGARPATPRRVSFAPAEEVYQIEDP 700
            V CL+ID RGELL+TGDESG+ICARLLH   G    DG   G     G P                  +V+ EAH+G V AI HVE G    +  LFVSGG GG VRLW               G   DL ++V LL DMLVGGFQV+ LA S S  VP+VLAGTAEGTVFAF +     P  R +G              GG  GS   G  PP        LG + MKFEHTS P+  V CS EQELIA  DA GIVRTYRP  P R      P  G   +   A  A R                      F+LVVECRLG+R V                   V   G               EVLRTCT  G LR+    SLPTRPMRP          P       E + P            +P    A    S                        ++ +R P     R    +  G      GVGG  G R            RGE PLP ARPA PRRVSFAPA++VY++EDP
Sbjct:    5 VGCLSIDRRGELLVTGDESGAICARLLHH-SGNRSGDGTAYGSSSFEGGPSXXXXXX--------XVAEVLREAHSGEVLAISHVEGGAGDDDPALFVSGGKGGVVRLWKAACLERSRETAAAGGSGGDLEVQVELLKDMLVGGFQVSCLAASLSPTVPIVLAGTAEGTVFAFHLLQAQEPSDRRDGEAEDDRPAVGYGDRGGRGGSAASGREPPDDAVGRTELGAVLMKFEHTSEPIEGVCCSQEQELIAATDAAGIVRTYRPLLPRRVSTDNNPGDGAPPTTAAAAEARR----------------------FELVVECRLGARPVXXXXXXXXXXXXXXXXXXXVGGEG---------------EVLRTCTARGILRLWLTASLPTRPMRPPXXS-----APTRLPDDHEALAP------------LPHTSNAGTDSSXXXXXXXXXXXXXXXXXXXXXVGAEQENRDPSDPFSRSTAIDATGSGSGVVGVGG--GERGEEVE----LTARGEPPLPKARPAAPRRVSFAPADQVYKLEDP 479          
BLAST of mRNA_F-serratus_M_contig869.20047.1 vs. uniprot
Match: A0A836CAG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.650e-24
Identity = 130/403 (32.26%), Postives = 171/403 (42.43%), Query Frame = 0
Query:   81 LGLCGADGSFVLAHHGAG-KTIAVCTYAVYFSTLPVHLWGRSQAGDGSRASPPVPSAPARRVERPWSQMAFVPGHPGEVVFVQGWSPRVLLTNLSAEEE-------------GRYGGGTTLARGERFGLLEGSRVLALDGHEAHVRCLAIDSRGELLLTGDESGSI-CARLLHFDKGGARDDGDGGGDPGDPVTNERLLGETLGDDGEYVKVVSEAHAGGVFAIRHVEDGDAGGNVKLFVSGGAGGAVRLWGVTVAVPRVHVGPHEDLLEVLLLTDMLVGGFQVTSLAVSPSYRVPLVLAGTAEGTVFAFRMPLRRAEGGGAPGSGDGDAPPGVGEWEKGLG--VLAMKFEHTSRPVVAVSCSLEQELIATADADGIVRTYRPRSPARAGDARLPQQGLQRSA 466
            LGLCG  GS  L    A  +T    T  VYFS +P           G R+         RRV  P S + F+ G  GE  FVQG S RVLL+ L                   R G  +  A   R+  L+GSRV+ L  H A       +S   +        SI  A+   F                 P+    +L   L              AG VFA  HV    A    + FV+GG+ G VR+WGV        VG   +L ++  L ++  GG QVT+LA +      +V+AG+ EGTVFAFR    R   G A    DG + P   E E  +    L    EHT++P+V ++CS EQ+L   ADA G VR YRP+   R G  R  +   +R+A
Sbjct:    2 LGLCGQGGSLQLLDADAAIETEVHRTLGVYFSNVPF------PNAVGQRSE--------RRVNEPISMLHFIAGRIGEFAFVQGRSERVLLSALPDAPSPLRPVREPVRASLDRAGDDSACASASRWSFLDGSRVVELVKHTAQGSSKPCESILRVRQVRKTRRSIVAAQSSQFTS---------------PLQLYHVLTRLL------------IPAGPVFAAAHVPVPPAAAAAR-FVTGGSDGVVRMWGV-------QVGESGEL-KLAPLRELQAGGCQVTALAANAR----MVVAGSLEGTVFAFRADGGR---GAAAAPDDGSSAPPDQEVETVVDGQPLIFMLEHTTQPIVGIACSSEQQLTVAADATGAVRLYRPQPDERRGQLRQLRTPAERAA 347          
BLAST of mRNA_F-serratus_M_contig869.20047.1 vs. uniprot
Match: A0A4D9D7S7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7S7_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.750e-6
Identity = 119/449 (26.50%), Postives = 172/449 (38.31%), Query Frame = 0
Query:   31 MFRNMRSWDEMGETGLRLCAEAFSPAACLPSEVITCCWDPNDSAGAGAGTLGLCGADGSFVLAHHGAGKTIAVCT-YAVY---FSTLPVHLWGRSQAGDGSRASPPVPSAPARRVERPWSQMAFVPGHPGEVVFVQGWSPRVLLTNLSAEEEGRY------GGGTTLARGERFGLLEGSRVLALDGHE-----AHVRCLAIDSRGELLLTGDESGSICARLLHFDKGGARDDGDGGGDPGDPVTNERLLGE-----TLGDDGEYVKVVSEAHAGGVFAIRHVED-GDAGGNVKLFVSGGAGGAVRLWGVTVAV-PRVHVGPHEDLLEVLLLTDMLVGGFQVTSLAVSPSYRVPLVLAGTAEGTVFAFRMPLRRAEGGGAPGSGDGDAPPGVGEWEKGLGVLAMKFEHTSRPVVAVSCSLEQELIATADADGIVRTYRPRSPARAGDARL 457
            M  N+ S+D+  ET  RLCA    P A    E       P +     +  L L  + G   + H     T AV + Y VY   F    V   G S+A D       +   P +    PW+  AFVPG    +  + G +  V+ T+L  + +             + A G     L+     A  G E     A +R +A+DS G +L +G++ G  C R+               G P   +  +   G      T    G  V V+  AHAG ++ + H E      G+V   V+GG   AVR+W   V+    V V P   LL        L  G             + L+LAG+  GT++ +       E              G  E    L   A + E             E  +IATADA GIVR YRPR+ +++G+AR+
Sbjct:    1 MSHNLLSFDQGSETCYRLCA---LPVASARREATIKLARPVED----SNHLALADSGGCLRVLHV---PTQAVTSLYQVYRGSFLEDEVDEEG-SEAEDADTLRAQI--KPPKPCPLPWTDFAFVPGRKNSLFLLLGETNTVMCTSLPPQLDPEDMKAQAPRASASFAYGVPLVALDQGFTPAAAGIEGRQTSARIRTIAVDSTGSVLASGNDDG--CLRVWALT-----------GRPSSGLAAQTASGARPSRVTPPAKGNVVDVL-RAHAGPIWRVAHGEALAREEGHV---VTGGGDRAVRVWAWAVSEWGAVQVQPLHTLLTETCTVRSLAAGA-----------GMGLILAGSNRGTLYCWSSLTAALE----------YVAVGGDEPVVALAAFAAEGEGGEGEYTGGG---EASVIATADALGIVRLYRPRAWSQSGEARV 395          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig869.20047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJE2_ECTSI1.380e-6238.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2I0_9PHAE8.050e-5837.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAG1_9STRA2.650e-2432.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D7S7_9STRA8.750e-626.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 516..536
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 205..318
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 271..317
e-value: 0.76
score: 17.8
coord: 197..236
e-value: 1.0
score: 16.9
coord: 406..445
e-value: 2.8
score: 14.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 132..468
e-value: 8.4E-15
score: 56.6
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 147..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig869contigF-serratus_M_contig869:81718..90699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig869.20047.1mRNA_F-serratus_M_contig869.20047.1Fucus serratus malemRNAF-serratus_M_contig869 81717..90699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig869.20047.1 ID=prot_F-serratus_M_contig869.20047.1|Name=mRNA_F-serratus_M_contig869.20047.1|organism=Fucus serratus male|type=polypeptide|length=782bp
ADTGCPRALRLLPLIGDPWKSRSGHRVPLTMFRNMRSWDEMGETGLRLCA
EAFSPAACLPSEVITCCWDPNDSAGAGAGTLGLCGADGSFVLAHHGAGKT
IAVCTYAVYFSTLPVHLWGRSQAGDGSRASPPVPSAPARRVERPWSQMAF
VPGHPGEVVFVQGWSPRVLLTNLSAEEEGRYGGGTTLARGERFGLLEGSR
VLALDGHEAHVRCLAIDSRGELLLTGDESGSICARLLHFDKGGARDDGDG
GGDPGDPVTNERLLGETLGDDGEYVKVVSEAHAGGVFAIRHVEDGDAGGN
VKLFVSGGAGGAVRLWGVTVAVPRVHVGPHEDLLEVLLLTDMLVGGFQVT
SLAVSPSYRVPLVLAGTAEGTVFAFRMPLRRAEGGGAPGSGDGDAPPGVG
EWEKGLGVLAMKFEHTSRPVVAVSCSLEQELIATADADGIVRTYRPRSPA
RAGDARLPQQGLQRSAGGATNAERGVGPVGAKEGSMASTTSTTTRLFDLV
VECRLGSRTVSCQFALDRMEEKAEEAKEEVFVVGEEEKYSPRRQQQHKTE
VLRTCTRDGSLRVCSLPTRPMRPAPQQPRSPFTPPGFVGTSEGVTPSSSP
AAAPAGPAVPSLVAADYQESLDRASRQPYPGVGRGVPEEEAGEKDREFGV
GGAAGRRSRAAAEGGGSAVRGEAPLPGARPATPRRVSFAPAEEVYQIEDP
SDEDDADGPRAQGFQSEDFEIDGDLETPLPPPPSPTPAPDATITGPRRLR
QAWGRSPRGSAGASGSSSGNGDRGDVSIDWRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf