prot_F-serratus_M_contig869.20044.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig869.20044.1
Unique Name	prot_F-serratus_M_contig869.20044.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	135

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A6H5L5C3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C3_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 9.610e-38
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 0

Query:    1 LCRRFVQLFLVGSDVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGIPVRELPLLDPA 88
            LCRRFVQLFLVG+DVVSVGEAAEKLSDP DVA  TV+FKTRARRLYDIANALAALGLV+KV S+ DS KPNFRWIG+PVR LPLLDP+
Sbjct:  576 LCRRFVQLFLVGNDVVSVGEAAEKLSDPSDVAGSTVVFKTRARRLYDIANALAALGLVDKVRSK-DSCKPNFRWIGVPVRTLPLLDPS 662

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: D8LJE0_ECTSI (Putative Del transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE0_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 6.840e-26
Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 0

Query:    1 LCRRFVQLFLVGSDVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPN 71
            LCRRFVQLFLVG+DVVSVGEAAEKLS+P DVA  TV+FKTRARRLYDIANALAALGLV+KV S+  S+K N
Sbjct:  563 LCRRFVQLFLVGNDVVSVGEAAEKLSEPSDVAGSTVVFKTRARRLYDIANALAALGLVDKVRSKDSSSKGN 633

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A7S0SC13_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SC13_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 1.200e-13
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0

Query:    1 LCRRFVQLFLVG-SDVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGIPVRELPLLDPASFNADSIARAAAGLDLSP 106
            L ++FVQLFLV  + VVS+  AA  L    +        KT+ RRLYDIAN L++L L+EK H  ADS KP FRW+G+   E  L   A+ NA ++A +AA L+  P
Sbjct:   13 LSQKFVQLFLVSRARVVSLESAARTLLGSCE---DQAKLKTKVRRLYDIANILSSLRLIEKTHL-ADSRKPAFRWLGV---EKELAAAAAVNATALATSAATLERQP 112

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A067G2W9_CITSI (E2F_TDP domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067G2W9_CITSI)

HSP 1 Score: 68.2 bits (165), Expect = 6.420e-11
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 0

Query:    1 LCRRFVQLFLVGS-DVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGIPVRELPLLDPASFNADSIARAAAGLDL 104
            L + FV+LF+  + D++++ E A+ L   +  A  T + +T+ RRLYDIAN L+++ L+EK H+ AD+ KP FRW+G+   E+ L D  S N D   +   G D+
Sbjct:   82 LTQNFVRLFVCSNVDMITLDEVAKLL---LGDAHNTSVMRTKVRRLYDIANVLSSMNLIEKTHT-ADTRKPAFRWLGVNRLEIGLAD--SLNLDESRKRTFGTDV 180

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A8K0GUP4_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GUP4_9ROSA)

HSP 1 Score: 67.4 bits (163), Expect = 1.630e-10
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0

Query:    1 LCRRFVQLFLVGS-DVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGI 77
            L + FV+LF+  S DV+S+ EAA+ L   +  A  + + +T+ RRLYDIAN L+++ L+EK H+ ADS KP FRW+G+
Sbjct:  154 LTQNFVKLFVCSSVDVISLDEAAKLL---LGDAHNSSIMRTKVRRLYDIANVLSSMNLIEKTHT-ADSRKPAFRWLGL 227

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A7S1B9K5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9K5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.710e-10
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0

Query:    1 LCRRFVQLFLVGSDVVSVGEAAEK-LSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGIPVRELP 83
            L ++F+Q+FLVG++V+S+ EA+EK L  P +        KT+ RRLYDIAN + ++G+++KV   +   KP+F+W  IP  +LP
Sbjct:  147 LSQKFIQMFLVGNNVLSLAEASEKILGCPSNSRNEEKGMKTKVRRLYDIANVMVSIGIIQKV-ILSRFKKPSFKWDFIPPPKLP 229

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A7S3KPA1_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KPA1_EUPCR)

HSP 1 Score: 64.3 bits (155), Expect = 2.770e-10
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0

Query:    1 LCRRFVQLFLVGSDVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIG 76
            LC  F++ FL   + +S+ +AA ++SD     +     KT+ RRLYDIAN LAAL L+EK  +  ++ KP F+W+G
Sbjct:    6 LCESFIKQFLTWRETISLDQAARRISDD---QIDESKLKTKVRRLYDIANVLAALNLIEK--TSLETRKPAFKWVG 76

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: A0A1Q3D535_CEPFO (E2F_TDP domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D535_CEPFO)

HSP 1 Score: 66.6 bits (161), Expect = 3.190e-10
Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = 0

Query:    1 LCRRFVQLFLVGS-DVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGI 77
            L + FV+LFL  + D++S+ EAA+ L   +  A  + + +T+ RRLYDIAN L++L L+EK H+R D+ KP FRW+G+
Sbjct:  164 LTQNFVKLFLCSNADLISLDEAAKLL---LGDAHSSSIMRTKVRRLYDIANVLSSLSLIEKTHAR-DTRKPAFRWLGV 237

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: UPI00106C44E3 (LOW QUALITY PROTEIN: transcription factor E2F8-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C44E3)

HSP 1 Score: 66.6 bits (161), Expect = 3.830e-10
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0

Query:    1 LCRRFVQLFLVGSD-VVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSR-ADSNKPNFRWIGIPVRELP 83
            L ++F+ +FL+    VV++ +AA  L +  D     V +KT+ RRLYDIAN L++L L+EKVH R A   KP F+WIG+ +  LP
Sbjct:  334 LSQKFLLMFLLSKGGVVTLEDAATVLLEEHDER--NVKYKTKVRRLYDIANILSSLELIEKVHIRGAVGKKPGFKWIGVDIESLP 416

[Close]

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Match: B9R8Z0_RICCO (E2F, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9R8Z0_RICCO)

HSP 1 Score: 66.2 bits (160), Expect = 4.380e-10
Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = 0

Query:    1 LCRRFVQLFLVG-SDVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIANALAALGLVEKVHSRADSNKPNFRWIGIPVR 80
            L + FV+LFL   +D++S+ EAA+ L   +  A  + + +T+ RRLYDIAN L++L L+EK H+ A+S KP FRW+G+ V+
Sbjct:  168 LTQNFVKLFLCSKADLISLDEAAKLL---LGDAHNSSIMRTKVRRLYDIANVLSSLKLIEKTHT-AESRKPAFRWLGLRVK 244

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig869.20044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L5C3_9PHAE	9.610e-38	85.23	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D8LJE0_ECTSI	6.840e-26	81.69	Putative Del transcription factor (Partial) (Fragm...	[more]
A0A7S0SC13_9CHLO	1.200e-13	45.79	Hypothetical protein (Fragment) n=1 Tax=Mantoniell...	[more]
A0A067G2W9_CITSI	6.420e-11	39.05	E2F_TDP domain-containing protein n=1 Tax=Citrus s...	[more]
A0A8K0GUP4_9ROSA	1.630e-10	47.44	Uncharacterized protein n=1 Tax=Rhamnella rubriner...	[more]
A0A7S1B9K5_9STRA	1.710e-10	42.86	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S3KPA1_EUPCR	2.770e-10	42.11	Hypothetical protein (Fragment) n=1 Tax=Euplotes c...	[more]
A0A1Q3D535_CEPFO	3.190e-10	46.15	E2F_TDP domain-containing protein n=1 Tax=Cephalot...	[more]
UPI00106C44E3	3.830e-10	44.71	LOW QUALITY PROTEIN: transcription factor E2F8-lik...	[more]
B9R8Z0_RICCO	4.380e-10	45.68	E2F, putative n=1 Tax=Ricinus communis TaxID=3988 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003316	E2F/DP family, winged-helix DNA-binding domain	SMART	SM01372	E2F_TDP_2	coord: 1..76 e-value: 1.3E-12 score: 57.9
IPR003316	E2F/DP family, winged-helix DNA-binding domain	PFAM	PF02319	E2F_TDP	coord: 1..76 e-value: 2.9E-13 score: 49.6
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..78 e-value: 4.8E-12 score: 47.2
None	No IPR available	PANTHER	PTHR12081:SF7	E2F-LIKE (MAMMALIAN TRANSCRIPTION FACTOR)	coord: 1..76
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.458
IPR015633	E2F Family	PANTHER	PTHR12081	TRANSCRIPTION FACTOR E2F	coord: 1..76
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 1..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig869	contig	F-serratus_M_contig869:49178..51136 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig869.20044.1	mRNA_F-serratus_M_contig869.20044.1	Fucus serratus male	mRNA	F-serratus_M_contig869 49176..51136 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig869.20044.1 ID=prot_F-serratus_M_contig869.20044.1|Name=mRNA_F-serratus_M_contig869.20044.1|organism=Fucus serratus male|type=polypeptide|length=135bp
LCRRFVQLFLVGSDVVSVGEAAEKLSDPVDVALGTVMFKTRARRLYDIAN
ALAALGLVEKVHSRADSNKPNFRWIGIPVRELPLLDPASFNADSIARAAA
GLDLSPSPSSSLPLEALGSPLRAVSQQSIARREAT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003316	E2F_WHTH_DNA-bd_dom
IPR036388	WH-like_DNA-bd_sf
IPR015633	E2F
IPR036390	WH_DNA-bd_sf