prot_F-serratus_M_contig868.20037.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig868.20037.1
Unique Nameprot_F-serratus_M_contig868.20037.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length584
Homology
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BLAST of mRNA_F-serratus_M_contig868.20037.1 vs. uniprot
Match: D7G9B3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B3_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.170e-9
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:    2 RQSCDNCAKKKIKCSGEPDRCLRCRKDQVECVYSPKKKTGPTPRR 46
            R SCD CAKKK KCSG   RCLRCR+D  ECVYSPKK+TGP  RR
Sbjct:  310 RLSCDYCAKKKTKCSGGVGRCLRCRRDDQECVYSPKKRTGPPKRR 354
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BLAST of mRNA_F-serratus_M_contig868.20037.1 vs. uniprot
Match: A0A6H5KXH0_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH0_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.810e-7
Identity = 31/45 (68.89%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    2 RQSCDNCAKKKIKCSGEPDRCLRCRKDQVECVYSPKKKTGPTPRR 46
            R SCD CAKKK KCSG   RCLRCR+D  ECVYSP  +TGP  RR
Sbjct:  589 RLSCDYCAKKKTKCSGGVWRCLRCRRDDQECVYSPNTRTGPPKRR 633
[Close]
BLAST of mRNA_F-serratus_M_contig868.20037.1 vs. uniprot
Match: W6ZRT9_COCMI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Bipolaris oryzae ATCC 44560 TaxID=930090 RepID=W6ZRT9_COCMI)

HSP 1 Score: 56.6 bits (135), Expect = 7.170e-5
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:    1 MRQSCDNCAKKKIKCSGEPDRCLRCRKDQVECVYSPKKKTG-PTPRR 46
            +  +CD C  +K+KCSG+  +CLRC+++Q+ CVYSP+K+ G P  RR
Sbjct:   14 LHAACDECRTRKLKCSGDTPKCLRCKREQIGCVYSPQKQMGRPRKRR 60
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig868.20037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G9B3_ECTSI3.170e-973.33Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5KXH0_9PHAE1.810e-768.89Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
W6ZRT9_COCMI7.170e-548.94Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 1..43
e-value: 1.1E-6
score: 38.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 3..39
e-value: 5.0E-7
score: 29.7
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 4..32
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 4..34
score: 9.655
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 1..52
e-value: 3.0E-8
score: 35.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig868contigF-serratus_M_contig868:114850..118706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig868.20037.1mRNA_F-serratus_M_contig868.20037.1Fucus serratus malemRNAF-serratus_M_contig868 114835..119107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig868.20037.1 ID=prot_F-serratus_M_contig868.20037.1|Name=mRNA_F-serratus_M_contig868.20037.1|organism=Fucus serratus male|type=polypeptide|length=584bp
MRQSCDNCAKKKIKCSGEPDRCLRCRKDQVECVYSPKKKTGPTPRRPGVA
NCYSNPSGNDGRGSTPTLMELPHSRLRGDGYSGSRDDGARRNSSSRSPDP
ASAWHNRRPLANNASSYTADHRLWAEVSLGGSSARTSRNSREEGYREEDE
QRQQQLTRDISPESTHRIKHVAEEVSGRDGAAAAAAAAAAGVDRGRRYQA
RVGGIDDDSSSGGGRRGASGQGSSSSKHQGRPSGGERRASIDEAIILSPG
SRADPVALESQQHQKEQAEVEEITAIEKRSVARDCSDATGAAGDARASVD
RRPPATSSSRRGSVSDGDNRGSNTASATTATTMVEGEGAGVETEDSRSAR
RSARRGGGRGEDDDRQDENGGNGGREGEDKDKIDAEEEKGRGRKPPRLEK
DNAVSEKTSGWEKPPLGSGTSAGEPPGATAATAEPGRAAAVEGGDNRRAV
EKLAQFGFDVTSTPVHHSPPFQHQQRRGRSRTPPMPAQSQPQPRPSPTSP
PAGRADDDDQGATEGDAVGSKKTRSPSSGKRKLAAAAATSAGGRVGVGSS
SSNPEKDLAGLGDGGSSSADEIIGPRPSKRMSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf