prot_F-serratus_M_contig866.20027.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig866.20027.1
Unique Nameprot_F-serratus_M_contig866.20027.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length445
Homology
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BLAST of mRNA_F-serratus_M_contig866.20027.1 vs. uniprot
Match: D7G8N9_ECTSI (Myb-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N9_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 2.520e-92
Identity = 149/212 (70.28%), Postives = 173/212 (81.60%), Query Frame = 0 
Query:  238 GEGDWDSEADGVPWTEFEDWLLQDTFSRYVIGSGKHVLWRRMVKEVPELMGRTPQEARQRWLRLTGRSRESRGDGGR-----DHISGSPSIDKFYLQPPVLEQWEEVFEGQDGAAGSFHSFRGNVFGQRGLADGTVMTTAPVDASGRRIQDQYVSTQCGVVYELGEGLRTDVMRKTSSKILKLAPATVLALSAAFYALTALSHHIQVEVFVI 444
            GE +W+  A+   WTEFEDWLLQDT+SRY IGSGKHVLWRRMV+EVPELM RTPQEAR+RWLRLTGR      +GG      + ++GSP++D FY+QPPVLEQWEE+ EG+        SFRGNVFGQRGLADGT MTTAP+D SGR+IQDQYV+TQCGVVYELGE   TD++ + SSK+LK+APATVLAL+ AFYALTALSHHIQVEVFVI
Sbjct:  156 GEFEWEGGAEAA-WTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGAEGGSRRERGEVMAGSPALDNFYIQPPVLEQWEEIVEGE-----GMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 361
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BLAST of mRNA_F-serratus_M_contig866.20027.1 vs. uniprot
Match: A0A836CN06_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN06_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.020e-59
Identity = 115/235 (48.94%), Postives = 142/235 (60.43%), Query Frame = 0 
Query:  228 VALTKSVVNLGEGDWDSEADGVPWTEFEDWLLQDTFSRYVIGSGKHVLWRRMVKEVPELMGRTPQEARQRWLRLTGRSRESRGDGGRDHI------------SGSPSIDKFYLQPPVLEQWEEVFEGQDGAAGSFHSFRGNVFGQRGLADGTVMTTAPVDASGRRIQDQYVSTQCGVVYELG------EGLRTDVMRKTSSKILKLAPATVLALSAAFYALTALSHHIQVEVFVI 444
            VA   SV      D   EAD +PWTEFEDWLLQDTF+RY IGSGKHVLW RMV EVPEL+GRTPQEAR+RWL +TGR  + R  G                 SG+P ++ FYLQPP+L  WEE+ +G         SF G+V G  GLADG ++ T  VD +GRR+ DQYV T+CG V+ELG      +   T  +   +S     AP   LA +AA    T L+HH+Q+EVFV+
Sbjct:    4 VATASSVRYRFSEDQHEEAD-MPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDG---------SFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228
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BLAST of mRNA_F-serratus_M_contig866.20027.1 vs. uniprot
Match: A0A7S0Q7J8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q7J8_9EUKA)

HSP 1 Score: 70.5 bits (171), Expect = 1.120e-10
Identity = 40/121 (33.06%), Postives = 61/121 (50.41%), Query Frame = 0 
Query:  251 WTEFEDWLLQDTFSRYVIGSGKHVLWRRMVKEVPELMGRTPQEARQRWLRLTGRSRESRGDGGRDHISGSPSIDKFYLQPPVLEQWEEVFEGQDGAAGSFHSFRGNVFGQRGLADGTVMTT 371
            W++ E W L+D    Y +  G+ V+WRR+  +VPEL+GR P++ R RWL L                + +P +  +   PP LE WE + +           F+G++FG  G+ DGTV  T
Sbjct:   59 WSDRELWALEDAVPHYSLERGRLVMWRRLSLDVPELIGRPPEQLRARWLSL--------------QPADAPQV--WPENPPTLENWEALGDS---------CFQGDLFGVSGVRDGTVRAT 154
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig866.20027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8N9_ECTSI2.520e-9270.28Myb-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN06_9STRA1.020e-5948.94Myb-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S0Q7J8_9EUKA1.120e-1033.06Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.57
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 243..302
score: 6.841

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig866contigF-serratus_M_contig866:269100..282484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig866.20027.1mRNA_F-serratus_M_contig866.20027.1Fucus serratus malemRNAF-serratus_M_contig866 268417..282645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig866.20027.1 ID=prot_F-serratus_M_contig866.20027.1|Name=mRNA_F-serratus_M_contig866.20027.1|organism=Fucus serratus male|type=polypeptide|length=445bp
MTMRRMQTMAFMLLPLAPSDVLLRATGFVSPSPTARTLLPTQPPRDASST
TCSSRRGQLRSGVRSRTGATAGTHGCDAALRSASRSRAAATIPSRGTRPM
SPAQSRRGSTRRCCASAGASVDESPSPRSSVDRLHGGSTGWSARVPIGQG
QTSSATSGGGVVAVTENEGCREELADATPTEEAGASAAQASRSRRDVGRE
NPAGFRDDLEELPDPATGVAGVREGYSVALTKSVVNLGEGDWDSEADGVP
WTEFEDWLLQDTFSRYVIGSGKHVLWRRMVKEVPELMGRTPQEARQRWLR
LTGRSRESRGDGGRDHISGSPSIDKFYLQPPVLEQWEEVFEGQDGAAGSF
HSFRGNVFGQRGLADGTVMTTAPVDASGRRIQDQYVSTQCGVVYELGEGL
RTDVMRKTSSKILKLAPATVLALSAAFYALTALSHHIQVEVFVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom