mRNA_F-serratus_M_contig866.20022.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 194 bits (493), Expect = 1.060e-49 Identity = 163/539 (30.24%), Postives = 258/539 (47.87%), Query Frame = 1
Query: 1 ADNGGEFEGKVQRE-LDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYARQSVREH---KMAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV--ERQAVQW-IDGSKETGSDG--TSRDDRGMKSAGGEIIVERGTPQLNVQELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLH---CFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQ--EFPGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVV---DGEAEMVVV-VHVDDIL 1539
+DNGGE+ K ++ L I H+ T P + NG AER L+E A +M +P+E WA+A+ A N+S T S + +P+E F + P ++L++FG V Y + +H K+ K KC+F+G +P GT L +RSR+++ ER ++ + S E+ SD +++D + G++ ++ +NV++ Q P L NVP L+ + R E+ + Q + E++ C D T D+ EPRN +A + +W+KA ++E ++EN + V P DK +G++ ++K K DG VEK+K RLVAQG+ Q EG+ Y E +SP SIR LLA A D E+ D AFL+ D+ +EIYMK PE ++ E P V +L K+++GL Q+ RCWN+ + + G++Q AD C++ K V +G+ V++ +HVDDIL
Sbjct: 565 SDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHAG----MPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVH--IPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQ-------------------------------------PILEN-----NVP----LQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDIL 1039
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT) HSP 1 Score: 187 bits (476), Expect = 1.370e-47 Identity = 158/524 (30.15%), Postives = 264/524 (50.38%), Query Frame = 1
Query: 1 ADNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVERQAVQWIDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAING--NVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEF--QEFPGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVV-DGEAEMVVVVHVDDIL 1539
+DNGGE+ K + L + I H+ + P NGVAER ++E ++ + +P E WA+A+ + N+S T + ++ +PYE F K P ++LR+FG + Y + K+ K K +FMG P VS +RSR+++ + ++ D +T S + DDR E P + ++E + ++ Q+ ++ ++R ++ EG +A + P + +N NV R RRP +E C+L ND+ T D+ EP N +A EW++A ++E ++EN + V+ PK K +G+K ++K K ++G V++YK RLVAQG+ Q EGV Y+E +SP +IR LLA + AK+ E+ D + AFL+ ++ EEIYM+ P+ + +E P V +L K+I+GL Q+ RCWNN + + G++Q ++DPC++ K + D +++ +HVDDIL
Sbjct: 462 SDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHAH----IPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEK-KFHDFDIQTSS---NFDDR----------AEDDIP-IMIEETPVDGNENQDEIA-NQRVAENAEGNQQA------NDQPVGGTFEETFMNEVRNVG-----ERRMRRPPNRFDE---ECYLA-------NDI----------------TADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSIHVDDIL 925
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 182 bits (461), Expect = 1.160e-45 Identity = 159/535 (29.72%), Postives = 246/535 (45.98%), Query Frame = 1
Query: 1 ADNGGEF-EGKVQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAI---ILMEELNDVINVPR-EKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQW---------------IDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDV-PEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVAR-PKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQEFPGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDIL 1539
+DNGG F G+ + I E TP + ++NGVAER LGL E A+ I + L + +P+ ++LWA+AM +A +A N + ++ + KSPYE+W+G++ A F Y + R K+ PKGE C ++G R+ P VL R+ I E + V W I+ ++E G + S DD +E S++ V + + +RRP V+ L F A D ++ + DV PEP + ++A+ S W KA E+ G++ A+ P+ I + ++K K + GK+ K K RLVA+GF Q GV Y E +SPT +AASIR+++A A + EL H D EQAF+++ +D E++MK+P G + RLNK+++GL QA R + + D+ IGFEQ+ +DPCV R ++ E ++ +HVDDIL
Sbjct: 194 SDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPYP-FLKPAYCKWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRNVTWEALPSQLPPPQPPLPIEVAEEEGEE--SDDDVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEE----------------------SMDXXXXXXXXXXXXXXXVE-VEASPPAARRPQHVVD---LADFNTAAR--------------DAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL 683
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT) HSP 1 Score: 182 bits (461), Expect = 1.250e-45 Identity = 150/506 (29.64%), Postives = 253/506 (50.00%), Query Frame = 1
Query: 1 ADNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIVERQAVQWIDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAING--NVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEF--QEFPGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKV 1488
+DNGGE+ K + L + I H+ + P NGVAER ++E ++ + +P E WA+A+ + N+S T + ++ +PYE F K P ++LR+FG + Y + K+ K K +FMG P VS +RSR+++ + ++ D +T S + DDR E P + ++E + ++ Q+ ++ ++R ++ EG +A + P + +N NV R R P +E C+L ND+ T D+ EP N +A EW++A ++E ++EN + V+ PK K +G+K ++K K ++G V++YK RLVAQG+ Q EGV Y+E +SP +IR LLA + AK+ E+ D + AFL+ +++EEIYM+ P+ + +E P V +L K+I+GL Q+ RCWNN + + G++Q ++DPC++ +V
Sbjct: 549 SDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHAH----IPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEK-KFHDFDIQTSS---NFDDR----------AEDDIP-IMIEETPVDGNENQDEIA-NQRVAENAEGNQQA------NDQPVGGTFEETFMNEVRNVG-----EHRMRTPPNRFDE---ECYLA-------NDI----------------TADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYNEV 995
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A2K3LF68_TRIPR (Integrase catalytic domain-containing protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LF68_TRIPR) HSP 1 Score: 178 bits (452), Expect = 1.280e-45 Identity = 145/536 (27.05%), Postives = 258/536 (48.13%), Query Frame = 1
Query: 1 ADNGGEFEG-KVQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYARQSVR-EHKMAPKGEKCVFMGIPRNFPTGTVSVLLVR----SRNIVERQAV-QWIDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQEL-GQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLHCF--------LQAIEAEEENDVEDVLACDDGG------QMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQE-FPGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDIL 1539
+DNG EF +Q ++ I HE + T Q N ER ++ A L + N I+ W + +L A N++ T + ++G +PYE+ FGKSPT HL++FG + Y S + K P+ E+C+F+G P+ V L R SR++V + + ++ K+T ++ + + +P ++ GQ++++ E ++ + +E Q + G G+ ++G + I + +T L R+R+P + +++ +C+ + A ++ + + + Q + A EP++ ++A++ EW E A E+ + EN P K +G + +YK K G++EKYK RLVA+G+ QVEG + E ++P ++R LL A AK EL D AFL D++EE+YM++P + G V RL K+++GL QA R W +K + GF+++ AD +F +G M ++++VDD++
Sbjct: 15 SDNGTEFTNMNIQTFFKQKGIIHETSCVATPQQNARVERKHRHILNIARALRFQANLPIH-----FWGECILAATHIINRTPTVA-NQGSTPYEVLFGKSPTYGHLKIFGCLCYVSTSTKLRDKFDPRAERCIFVGYPQGQKGWKVYNLKTREIFISRDVVFYEHILPYVVNEKKTANEVSVXXXXXXXXXXXXXXPQTKSPSTVFHDIYGQQENNHDEVVNYESQEDQEDGGDM----GTDQMDGHNEEVTNAIEIEHHNERVTELPPRTRQPPSHLQD--YYCYATHKNPISMPATQSHSSGKIYPITNFINNNCYSRSHQAYLAAVHSTEEPQSYQEAVKKPEWQE---AMAIELKALEENGTWDLTLPPPGKKIVGCRWVYKVKYKASGEIEKYKARLVAKGYTQVEGEDFNETFAPVAKMTTVRCLLTVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPNGYDTPKAGMVCRLRKSLYGLKQASRNWYSKLSRALIEYGFQESHADHSLFTYSKEGNF-MAILIYVDDLV 534
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A4Y2QC94_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QC94_ARAVE) HSP 1 Score: 180 bits (457), Expect = 3.590e-45 Identity = 157/521 (30.13%), Postives = 245/521 (47.02%), Query Frame = 1
Query: 1 ADNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDG----SKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQEF--PGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDIL 1539
+DNGGE+ GK ++ L + I H+ T P + Q NGV+ER LIE L+ E N +P ++ WA+A + A N+ T +GK+PYELW + P +H+R+FG YA Q + K+ K + +F+G ++ + + L ++ ++ R V++I+ +K+ + +D+ T QL EL +H+ ++ E E ++ E E S N + TS RS R G+ F E DVL D+ +E +W ++ + EM + +N K V P K IG + +K K G +E+YK RLVAQGF Q G Y E ++P + +IR LA AA K+ + H D + AFL ++++E+YM PE + E V +LNKAI+GL QA R W+ K + + GFEQ+KADPC+F+ +G M ++V+VDD+L
Sbjct: 173 SDNGGEYIGKEIEDFLKEQGIVHQLTVPYSSQQNGVSERKNRTLIEMTRCLLSEAN----LP-QRFWAEAAMTATYLQNRLPTKP--KGKTPYELWTNRKPNLSHIRVFGCKAYAYIQKQKRGKLDSKAVEGIFLGY--DYRSKGYRIYLGDNKIMISR-TVKFIENPLPYAKKEAKELQKQDET--------------TQQLVKLEL---KHEDNHSMKEGEINERTEINPCEDDGDELS--------------NSQIQ--TSQHRRSERKTKGIPPERFAFFANPERITEPKSWNDVLKMDN-----------------------PYEKQKWIESTKEEMKSLQKNETWKLVTPPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNP-MYIIVYVDDLL 626
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 180 bits (456), Expect = 7.080e-45 Identity = 158/527 (29.98%), Postives = 251/527 (47.63%), Query Frame = 1
Query: 4 DNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYARQSVREHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--RSRNIVERQAVQWIDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQELGQE--QHDTQEALSED-EREQQHEEGGAEAASGSASLEGPTAPALRK--LAINGNVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEF--QEFPGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVV---DGEAEMVVV-VHVDDIL 1539
DNGGE+ K + L + I H+ T P NGV+ER L+E +M + + WA+A+ A N+S TTS E +PYE F + P ++LR+FG +A ++ K K K VF+G +P GT L +R + + + +++G DG S G I V+ PQ+ +Q++ + D E + E+ ERE+ H + P + + GN+ R SR DD +A T D+ EP + ++A EW++A ++E +++N + V PK K +G++ ++K K DG VE++K RLVAQG+ Q +G+ Y E +SP SIR LLA A D E+ D + AFL+ ++DE I+MK PE + QE P V +LN++I+GL QA RCWN+ + + G+ ++ ADPC++ K + +G+ + V++ ++VDDIL
Sbjct: 553 DNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKE-ITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCS----GKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQ--------------PVGATYEENFMRETGNLGDKRQRRAPSR-------------------------------FDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDIL 1020
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A4Y2RM53_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2RM53_ARAVE) HSP 1 Score: 177 bits (449), Expect = 4.070e-44 Identity = 154/518 (29.73%), Postives = 245/518 (47.30%), Query Frame = 1
Query: 1 ADNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQ-ELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQEF--PGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDIL 1539
+DNGGE+ GK ++ L + I H+ T P + Q NGV+ER LIE L+ E N +P ++ WA+A + A N+ T + K+PYELW + P +H+R+FG YA Q + K+ K + +F+G ++ + + L ++ ++ R V++I+ K E+ + TPQ V+ EL E++ E +ER + + G E ++ ++ TS RS R G+ F +E DVL ++ +E +W ++ + EM + +N K V P K IG + +K K G +E+YK RLVAQGF Q G Y E ++P + +IR LA AA K+ + H D + AFL ++++E+YM PE + E V +LNKAI+GL QA R W+ K + + GFEQ+KADPC+F+ +G + ++V+VDD+L
Sbjct: 173 SDNGGEYIGKEIEDFLKEQGIVHQLTLPYSPQQNGVSERKNRTLIEMTRCLLSEAN----LP-QRFWAEAAMTATYLQNRLPTKP--KRKTPYELWTNRKPNLSHIRVFGCKAYAYIQKQKRGKLDSKAVEGIFLGY--DYRSKGYRIYLGDNKIMISR-TVKFIENPLPY-----------AKKEAKELQKQDETPQELVELELEHEENHLMEEGEINERTEVNPCEGDEYELSNSQIQ-------------------TSQHRRSERKRKGIPPERFAFFANPERIKEPKCWNDVLKMEN-----------------------PYEKQKWIESTKEEMKSLQKNETWKLVTPPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNP-IYIIVYVDDLL 626
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A4Y2QS60_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QS60_ARAVE) HSP 1 Score: 177 bits (450), Expect = 4.340e-44 Identity = 156/518 (30.12%), Postives = 245/518 (47.30%), Query Frame = 1
Query: 1 ADNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGSKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQ-ELGQEQHDTQEALSEDEREQQHEEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQEF--PGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDIL 1539
+DNGGE+ GK ++ L + I H+ T P + Q NGV+ER LIE L+ E N +P ++ WA+A + A N+ T + K+PYELW + P +H+R+FG YA Q + K+ K + +F+G ++ + + L ++ ++ R V++I+ K E+ + TPQ V+ EL E++ + E +ER + + P +L+ N + TS RS R G+ F +E DVL ++ +E +W ++ + EM + +N K V P K IG + +K K G +E+YK RLVAQGF Q G Y E ++P + +IR LA AA K+ + H D + AFL ++++E+YM PE + E V +LNKAI+GL QA R W K + + GFEQ+KADPC+F+ +G M ++V+VDD+L
Sbjct: 611 SDNGGEYIGKEIEDFLKEQGIVHQLTVPYSPQQNGVSERKNRTLIEMTRCLLSEAN----LP-QRFWAEAAMTATYLQNRLPTKP--KRKTPYELWTNRKPNLSHIRVFGCKAYAYIQKQKRGKLDSKAIEGIFLGY--DYRSKGYRIYLGDNKIMISR-TVKFIENPPPY-----------AKKEAKELQNQDETPQQLVELELEHEENHSMEEGEINERTEVN----------------PCEDDEYELS-NSQIQ--TSQHRRSERKTKGIPPERFAFFADPERIKEPKSCNDVLKMEN-----------------------PYEKQKWIESTKEEMKSLQKNETWKLVTPPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQKVCKLNKAIYGLKQAARAWLPKIGESLIKYGFEQSKADPCLFKFANNGNP-MYIIVYVDDLL 1064
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Match: A0A4Y2R9J3_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2R9J3_ARAVE) HSP 1 Score: 177 bits (449), Expect = 5.130e-44 Identity = 156/523 (29.83%), Postives = 248/523 (47.42%), Query Frame = 1
Query: 1 ADNGGEFEGK-VQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILMEELNDVINVPREKLWAQAMLFAYDATNKSVTTSTDEGKSPYELWFGKSPTANHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDG----SKETGSDGTSRDDRGMKSAGGEIIVERGTPQLNVQELGQEQHDTQEALSEDEREQQH--EEGGAEAASGSASLEGPTAPALRKLAINGNVPPITSLRTRSRRPHTGVEEGVLHCFLQAIEAEEENDVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWDEWRKAEETEMLGMVENYVHKQVARPKDKLGIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYMKIPEEFQEF--PGAVGRLNKAIHGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDIL 1539
+DNGGE+ GK ++ L + I H+ T P + Q NGV+ER LIE L+ E N +P ++ WA+A + A N+ T + K+PYELW + P +H+R+FG YA Q + K+ K + +F+G ++ + + L ++ ++ R V++I+ K + ++D+ T QL EL E++ + E +ER + + E+ G E + N + TS RS R G+ F +E DVL ++ ++E +W ++ + EM + +N K V P K IG + +K K G +E+YK RLVAQGF Q G Y E ++P + +IR LA AA K+ + H D + AFL ++++E+YM PE + E V +LNKAI+GL QA R W+ K + + GFEQ+KADPC+F+ +G M ++V+VDD+L
Sbjct: 501 SDNGGEYIGKEIEDFLKEQGIVHQLTVPYSPQQNGVSERKNRTLIEMTRCLLSEAN----LP-QRFWAEAAMTATYLQNRLPTKP--KRKTPYELWTNRKPNLSHIRVFGCKAYAYIQKQKRGKLDSKAIEGIFLGY--DYRSKGYRIYLGDNKIMISR-TVKFIENPPPYDKNEAKELQNQDET--------------TQQLVELELEHEENHSMEEGEINERTEVNPCEDDGDELS-------------------NSQIQ--TSQHRRSERKTKGIPPERFAFFANPERIKEPKSWNDVLKMEN-----------------------AYEKQKWIESTKEEMKSLQKNETWKLVTPPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNP-MYIIVYVDDLL 954 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig866.20022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig866.20022.1 >prot_F-serratus_M_contig866.20022.1 ID=prot_F-serratus_M_contig866.20022.1|Name=mRNA_F-serratus_M_contig866.20022.1|organism=Fucus serratus male|type=polypeptide|length=513bp ADNGGEFEGKVQRELDRRSITHEHTPPDTLQYNGVAERALGLLIEKAIILback to top mRNA from alignment at F-serratus_M_contig866:3223..4833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig866.20022.1 ID=mRNA_F-serratus_M_contig866.20022.1|Name=mRNA_F-serratus_M_contig866.20022.1|organism=Fucus serratus male|type=mRNA|length=1611bp|location=Sequence derived from alignment at F-serratus_M_contig866:3223..4833+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig866:3223..4833+ >mRNA_F-serratus_M_contig866.20022.1 ID=mRNA_F-serratus_M_contig866.20022.1|Name=mRNA_F-serratus_M_contig866.20022.1|organism=Fucus serratus male|type=CDS|length=3078bp|location=Sequence derived from alignment at F-serratus_M_contig866:3223..4833+ (Fucus serratus male)back to top |