mRNA_F-serratus_M_contig865.20021.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5K1H9_9PHAE (HTH psq-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H9_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.160e-36 Identity = 94/229 (41.05%), Postives = 133/229 (58.08%), Query Frame = 1
Query: 1 MPCAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCI-SKRSPSNSAK----RKEGQGFLQPDARKKKKTQES------GSRKRLSFEEKLEMIKLLDSKV-ARPEVARRFGCGITAIASVKREKVTLEDQEDIIDPS-DDEKELN------ESGDAESGGGRKVE-APPPYSDLSSCFGPLEQKAESAGNSEAAHFLRKAKMAFLA 627
MPCAAG+LCQLP++ +AP+GH+C GGCGGRLHGLCGE + ++ T RIC CI SK+ SN++ +++G D ++KKT+ + GSR R+ K+E+++LLD + +A +F CG + +VK E+ +E+Q S K L ES D E+ + APPPY+ LSS FG LE AE +GN +AA L+KAKMA +A
Sbjct: 1 MPCAAGELCQLPDQTPVAPHGHQC----HGGCGGRLHGLCGEQDQDAEYETARICFACIASKQKGSNASTAGKGKRKGSATESGDTARQKKTKPANHPDMTGSRTRMDIGTKMEILRLLDKGTRTQKSIAEQFNCGERTVRTVKAERAKIENQAAKTRSSATTRKNLRAMDFPEESSDDEASEEPSIHMAPPPYAALSSHFGALETAAEGSGNRDAAFHLQKAKMAMIA 225
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5L4Y6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y6_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.110e-24 Identity = 96/306 (31.37%), Postives = 134/306 (43.79%), Query Frame = 1
Query: 7 CAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCISKRSP----SNSAKRKEGQGFLQPDARKKKKTQESG---------SRKRLSFEEKLEMIKLLDSKVARPEVARRFGCGITAIASVK------------------------------------------------------------REKVT---LEDQEDIIDP-SDDEKEL------NESGDAES----------------GGGRKVEAPPPYSDLSSCFGPLEQKAESAGNSEAAHFLRKAKMAFLA 627
CA +LC+LPN L G + GHECR GCGGRLHG+CGE E+ R+C+ CI+K+ S KR + L D KKT+ +G +R RL+F ++LE++KLLD K E+ARR+ +AI+ +K R+K+ LE+Q + + S+D KE+ N + E+ +APP +++L+ FGPLEQ AES G +A HFLRKAKMAFLA
Sbjct: 4 CADQELCKLPNRPL----GEKDGHECRLGCGGRLHGICGEPEEEGGQEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLAWAGLEEQPEFAETLSEDAKEIFMEKVNNTFKEDENISDXXXXXXXXXXXXXXXXXXXKAPPSFAELADFFGPLEQYAESCGIGDAGHFLRKAKMAFLA 305
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.070e-20 Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 7 CAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCISKRSP----SNSAKRKEGQGFLQPDARKKKKTQESG---------SRKRLSFEEKLEMIKLLDSKVARPEVARRFGCGITAIASVKREKVTLE 417
CA +LC+LPN L G + GHECR GCGGRLHG+CGE E+ R+C+ CI+K+ S KR + L D KKT+ +G +R RL+F ++LE++KLLD K E+ARR+ +AI+ +K ++ LE
Sbjct: 4 CADQELCKLPNRPL----GEKDGHECRLGCGGRLHGICGEPEEEGGQEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLE 149
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5JPZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPZ6_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.440e-17 Identity = 57/145 (39.31%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 1 MPCAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCISKRSPSNSAKRKEGQGFLQPDARKKK-KTQESGSRK-----RLSFEEKLEMIKLLDSKVARPEVARRFGCGITAIASVKREKVTLE 417
MPCA G+LCQL + P+GH C +GGCGGRLHG+CG V D + RIC C++K + KRK A+ K+ K GS K R F K EM+KL+D KV ++A RF C + VK+ + E
Sbjct: 1 MPCAEGELCQLQDTTPQDPHGHGC----QGGCGGRLHGICGSVVDVGNE-NHRICSACVAK-----AGKRKVSAADSTGKAQSKRPKATNGGSNKSQPRARPDFSAKCEMLKLMDQKVTHEQLADRFKCSERLVRDVKKNRKKYE 135
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5K3B1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B1_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 7.260e-17 Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 7 CAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCISKRSP----SNSAKRKEGQGFLQPDARKKKKTQESG---------SRKRLSFEEKLEMIKLLDSK 333
CA LC+LPN L G + GHECR GCGGRLHG+CGE E+ R+C+ CI+K+ S KR + L D KKT+ +G +R RL+F ++LE++KLLD K
Sbjct: 4 CADQQLCKLPNRPL----GEKDGHECRLGCGGRLHGICGEPEEEGGQEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEK 121
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5JCH9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH9_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 4.280e-16 Identity = 60/142 (42.25%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 1 MPCAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCISKRSPSNSAKRKEGQGFLQPDARKKKKT---QESGSRKRLSFEEKLEMIKLLDSKVARPEVARRFGCGITAIASVKREKVTLE 417
MPCA G+LC ++ + H GH C+GGCGGRLHG CG V D D T RIC TC++ R A G G P R+K K+ ++ G R R KLE++KLLD+KVA+ + A RFGC +VK ++ +E
Sbjct: 1 MPCAEGELCL--QQDRTPEDSH--GHVCQGGCGGRLHGNCGSVFD--DIETHRICSTCVT-RIGKRKAAAANGAG-AGPSKRQKDKSGGSKKGGVRARPDNNTKLEILKLLDAKVAQVQNAERFGCSERFGRTVKADRKKVE 134
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5KME5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KME5_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 4.310e-13 Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 73 GHECRGGCGGRLHGLCGEVEDGSDTPTRRICHTCISK----RSPS-NSAKRKEGQGFLQPDARKKKKTQESGSRKRLSFEEKLEMIKLLDSKVARPEVARRFGCGITAIASVKREKVTLE 417
GH C+GGCGGRLHG CG + D RIC C++K ++P+ ++ R++ + + KK + G R R + KLEM++L+D+KV R ++A RF C + + VK+ + E
Sbjct: 126 GHPCKGGCGGRLHGNCGSMF--GDNEQHRICSACVAKDGKHKAPAADTGGREQSKRPVTNGGSKKSQPSRKGPRARPDLDAKLEMLRLMDAKVTREQIADRFACSVRLVRDVKKNRQKYE 243
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5JQT7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT7_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 1.590e-12 Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 1 MPCAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSD 144
MPCAAG+LCQLP++ +AP+GH+C GGCGGRLHGLCGE + ++
Sbjct: 1 MPCAAGELCQLPDQTPVAPHGHQC----HGGCGGRLHGLCGEQDQDAE 44
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5JXS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS3_9PHAE) HSP 1 Score: 53.5 bits (127), Expect = 1.450e-5 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 508 APPPYSDLSSCFGPLEQKAESAGNSEAAHFLRKAKMAFLA 627
APP +++L+ FGPLEQ AES G +A HFLRKAKMAFLA
Sbjct: 98 APPSFAELADFFGPLEQYAESCGIGDAGHFLRKAKMAFLA 137
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Match: A0A6H5KEK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK9_9PHAE) HSP 1 Score: 53.5 bits (127), Expect = 7.640e-5 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 508 APPPYSDLSSCFGPLEQKAESAGNSEAAHFLRKAKMAFLA 627
APP +++L+ FGPLEQ AES G +A HFLRKAKMAFLA
Sbjct: 585 APPSFAELADFFGPLEQYAESCGIGDAGHFLRKAKMAFLA 624 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig865.20021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig865.20021.1 >prot_F-serratus_M_contig865.20021.1 ID=prot_F-serratus_M_contig865.20021.1|Name=mRNA_F-serratus_M_contig865.20021.1|organism=Fucus serratus male|type=polypeptide|length=209bp MPCAAGDLCQLPNEELIAPNGHECGHECRGGCGGRLHGLCGEVEDGSDTPback to top mRNA from alignment at F-serratus_M_contig865:139834..140529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig865.20021.1 ID=mRNA_F-serratus_M_contig865.20021.1|Name=mRNA_F-serratus_M_contig865.20021.1|organism=Fucus serratus male|type=mRNA|length=696bp|location=Sequence derived from alignment at F-serratus_M_contig865:139834..140529+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig865:139834..140529+ >mRNA_F-serratus_M_contig865.20021.1 ID=mRNA_F-serratus_M_contig865.20021.1|Name=mRNA_F-serratus_M_contig865.20021.1|organism=Fucus serratus male|type=CDS|length=1254bp|location=Sequence derived from alignment at F-serratus_M_contig865:139834..140529+ (Fucus serratus male)back to top |