prot_F-serratus_M_contig864.20014.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig864.20014.1
Unique Nameprot_F-serratus_M_contig864.20014.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length396
Homology
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BLAST of mRNA_F-serratus_M_contig864.20014.1 vs. uniprot
Match: A0A7S2BQB5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BQB5_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 3.120e-7
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 0 
Query:  181 ANVIVWCCGTTLSICEELKYRFWRVVRRVTGALTEGVVLPGAGAPEIACAASLEFHAQRLEIEN---SCSLDRSSII-------QLYTPMVL----------RAMAEALDEVRLL 275
            A++ V  CG T  +  E + RFW  ++R+  AL  G VLPGAGA E+ACAASLE  A  ++ E+   +  L R S +        L T ++L          RA+A AL E R+L
Sbjct:    2 ASISVLACGHTAGLALETERRFWNCLQRLRSALVCGKVLPGAGASELACAASLEQQAAMVDAEDDGLARLLGRESFLAVSAALQSLVTRVLLNTGSSPDNSHRAVAAALGEWRVL 116
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig864.20014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2BQB5_9EUKA3.120e-738.26Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027409GroEL-like apical domain superfamilyGENE3D3.50.7.10coord: 9..142
e-value: 1.9E-6
score: 29.8
IPR027409GroEL-like apical domain superfamilySUPERFAMILY52029GroEL apical domain-likecoord: 37..99
IPR027410TCP-1-like chaperonin intermediate domain superfamilyGENE3D3.30.260.10coord: 181..215
e-value: 2.1E-7
score: 32.0
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 216..297
e-value: 2.1E-7
score: 32.0
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 38..301
e-value: 1.1E-13
score: 50.6
NoneNo IPR availablePANTHERPTHR46883FAMILY NOT NAMEDcoord: 19..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig864contigF-serratus_M_contig864:101538..104133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig864.20014.1mRNA_F-serratus_M_contig864.20014.1Fucus serratus malemRNAF-serratus_M_contig864 101536..104133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig864.20014.1 ID=prot_F-serratus_M_contig864.20014.1|Name=mRNA_F-serratus_M_contig864.20014.1|organism=Fucus serratus male|type=polypeptide|length=396bp
QTPTTQIFRSAEALASRSVNDNSESGLWAENVSLNLERFGVDMLLATGDV
CSSLRQLLALRGVVVLSGCLQEEVEAAASATGATPVPTIDVLTRDDVGTG
RDRNRGLQFEERQHESCARRFEGLAASILDVGVVSEERNVFVGEVGKQMG
SGLEVSDVVLMLYHPTLNNIGNIEKWSGAEANVIVWCCGTTLSICEELKY
RFWRVVRRVTGALTEGVVLPGAGAPEIACAASLEFHAQRLEIENSCSLDR
SSIIQLYTPMVLRAMAEALDEVRLLCTMNAGQVIHEASRQLSAAKNAAAQ
HLSRHQSQTAMSSRLPMESDSSRLRRCCPDWSSSLELAAVSLSAINGDST
VGTVLECDGSSKSGERSLDDNDSSPGHYRYEEAIVLDNYGARIGCL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom_sf
IPR027410TCP-1-like_intermed_sf
IPR027413GROEL-like_equatorial_sf
IPR002423Cpn60/TCP-1