mRNA_F-serratus_M_contig860.19999.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 100 bits (250), Expect = 2.380e-23 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 1 LDEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
L EVFPFV T +VH L +EK Y+ AA+ D+G DLW+FWHDNR +LP WYNVAKDVALIQPSSA MER
Sbjct: 409 LAEVFPFVTTAMVHELVVEKDLYSTAAAGTDSGCDLWAFWHDNRPELPAWYNVAKDVALIQPSSAFMER 477
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 6.130e-22 Identity = 48/69 (69.57%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 LDEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
L EV PFV VV L E YN+AA+ DAG DLW+FWHDNRLKL WYNVAKDVALIQPSSA MER
Sbjct: 300 LPEVLPFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYNVAKDVALIQPSSAFMER 368
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 6.740e-21 Identity = 46/69 (66.67%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 1 LDEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
L EV PFV VV L E YN+AA+ DAG DLW+FWHDNRLKL WY VAKD+ALIQPSSA MER
Sbjct: 51 LAEVLPFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYKVAKDIALIQPSSAFMER 119
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 5.580e-18 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 13 FPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLK--LPFWYNVAKDVALIQPSSASMER 207
FPFV + V L+ + DYNIAAS D G+DLWSFWHDNR K L WY VAKD+ L+QPSSA MER
Sbjct: 656 FPFVTENDVARLKDQMDDYNIAASGVDTGYDLWSFWHDNRHKSSLCHWYGVAKDIVLLQPSSAFMER 722
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5K1T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T8_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 3.430e-16 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 13 FPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLK--LPFWYNVAKDVALIQPSSASMER 207
FPFV+ D L+ + D NIAAS D G++LW+FWHD+R K L WY VAKD+AL+QPSSA MER
Sbjct: 66 FPFVSEDFAR-LKDQMVDCNIAASEVDTGYNLWAFWHDSRRKRNLSQWYQVAKDIALLQPSSAFMER 131
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5K4E0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4E0_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 8.430e-16 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 10 VFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
VFPF++ + V L EK DY +AA D +D W FW D++ KLP W+ V D+AL+QPSSA MER
Sbjct: 27 VFPFISEEQVDKLLTEKDDYYVAARVTDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMER 92
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 9.830e-15 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 10 VFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
VFPF++ + V L EK DY +AA D +D W FW D++ KLP W+ V D+AL+QPSSA MER
Sbjct: 430 VFPFISEEQVDKLLTEKDDYYVAARVTDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMER 495
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5JEX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX4_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 8.400e-13 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 7 EVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
+V PFV +V L EK D+ +AAS+ +A + +FW+DN+ KLP W+ + DVAL+QPSSA MER
Sbjct: 56 KVLPFVKKKMVRGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMER 122
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 2.290e-12 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 7 EVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
+V PFV + +V L EK DY +AAS+ D + +FW DN +LP W+ + DVAL+QPSSA MER
Sbjct: 56 KVLPFVKSKMVKGLLKEKEDYYMAASDTDIEYGHMAFWKDNEKRLPTWHALVLDVALLQPSSAFMER 122
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 5.080e-12 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 7 EVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWYNVAKDVALIQPSSASMER 207
+V PFV +V L EK D+ +AAS+ +A + +FW+DN+ KLP W+ + DVAL+QPSSA MER
Sbjct: 584 KVLPFVKKKMVRGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMER 650 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig860.19999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig860.19999.1 >prot_F-serratus_M_contig860.19999.1 ID=prot_F-serratus_M_contig860.19999.1|Name=mRNA_F-serratus_M_contig860.19999.1|organism=Fucus serratus male|type=polypeptide|length=69bp LDEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHDNRLKLPFWback to top mRNA from alignment at F-serratus_M_contig860:345106..345312- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig860.19999.1 ID=mRNA_F-serratus_M_contig860.19999.1|Name=mRNA_F-serratus_M_contig860.19999.1|organism=Fucus serratus male|type=mRNA|length=207bp|location=Sequence derived from alignment at F-serratus_M_contig860:345106..345312- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig860:345106..345312- >mRNA_F-serratus_M_contig860.19999.1 ID=mRNA_F-serratus_M_contig860.19999.1|Name=mRNA_F-serratus_M_contig860.19999.1|organism=Fucus serratus male|type=CDS|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig860:345106..345312- (Fucus serratus male)back to top |