prot_F-serratus_M_contig860.19998.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig860.19998.1
Unique Nameprot_F-serratus_M_contig860.19998.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length122
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig860.19998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 48..81
e-value: 0.0068
score: 25.6
coord: 6..39
e-value: 78.0
score: 7.1
NoneNo IPR availablePFAMPF13424TPR_12coord: 47..120
e-value: 1.1E-19
score: 70.4
NoneNo IPR availablePFAMPF13374TPR_10coord: 5..46
e-value: 7.7E-6
score: 25.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..120
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..122
e-value: 3.9E-40
score: 139.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..119
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..122
score: 9.766

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig860contigF-serratus_M_contig860:338208..339738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig860.19998.1mRNA_F-serratus_M_contig860.19998.1Fucus serratus malemRNAF-serratus_M_contig860 338207..339738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig860.19998.1 ID=prot_F-serratus_M_contig860.19998.1|Name=mRNA_F-serratus_M_contig860.19998.1|organism=Fucus serratus male|type=polypeptide|length=122bp
EHPDVAQSLHYRGWLLFQQAKYAEAAPLNERSQAIREKMLDPDHPELAEA
LHNRAAVFHAQGNFAEAEPLYAQSLEILERTLGPQHPDPAIAVSNRAVLL
HQQGKQAEAERLHRRALGILSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom