prot_F-serratus_M_contig86.19989.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig86.19989.1
Unique Nameprot_F-serratus_M_contig86.19989.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length908
Homology
BLAST of mRNA_F-serratus_M_contig86.19989.1 vs. uniprot
Match: D8LDA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA4_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 2.330e-67
Identity = 234/787 (29.73%), Postives = 314/787 (39.90%), Query Frame = 0
Query:  159 MGADKPVFTADDDWSLYKLSPSTKGRGELVNPYDSREDPIVCGALVGANSLISLDDVLDAERNFWQKAGLSVKVDDLRHRVQLVLEDFKYVLNTLFLEYCKRASGLSMLAVSDRKAFVPGNGGALIPVEE-----------------HPQEDAPRAPSIGDSDSATRSTSSXXXXXXXXXNSTPDRRFAPINFLGWEE-EEVSSRLQRVGGTGATRRPLTVNAM----IERFRKQETKQDRDGEAVGTNAQSCDGYDSFVTQRCMTGPQFLDLANDCTLLKGCFGWEAAARVVHRVCRVGRDAKALWSKEIVGDLDVDAEDKRLSPPWRGSPGECEGRRENTCSSGNTSTSVSASSTSISTCSNSDDAAGSA---VLTVGPTPRAKSRHG--------HDDKAIDVGEAGDGVSPGVGNYDGGSARQSSTTTSWPRTATPLSKEAAFLLATEDTEGGQGPMIFPEFVEALARLCLERYAPLSPWTPAPTRPPPAAKGHGKRPVDSRGMLPDCKGRSLARGQNTNLTTPSRSLGPALAPHRLRFAFERHLLYEVVNISQAPTKRTNREIDDMMERYAPRLKKIFVFFAVDGPSIMPAPSSGPTVSGASLETASAAATESSERKDRASAETFKAKRRRMPHHLGRNMKDIRLSVREFLGMLRSLEILDSRLTAREACRICATVMGLVIVA--------NGQERGAGMGAVSQLSQKNRPRSSIDGDVLFSVGEDSMALEDFTRMVFHCGNLKTWDGVCSISQRMDAFVLNDLFERFLDRTGEASLWWNR 904
            M  +KP   AD  WS ++L       G LV+P DSREDPIVC ALV AN  + L+DVL+AER FW+  G+S++V+DLRHRVQLVL DF+ VL T+F +Y +R SGL  LAV+      P    A +  E+                                       S+          S P    A   F G    EE  +RLQR      T R           +      E +    G  +GT      G  + V +  M+G QFLDL ++C +L+G FGW A A V+HRV R GR+ K   S EI+G                     C G      +S  T  S SA+S   + C  S   +G+        G     K R G        +  +A+   EA       + +Y  G     S            SK       T D + G                 + R+  +      P +     +G GK   ++  +  +         Q   L     S+G  LA HRLRFAFE+HLL EV+N S+A T++ +REI D+ME                                                                                           LDSRLT REACRICA V G V +A          + RG   G       + +     + + L S+G+DSM  E+F+R VFHCG+LKT DG+C +SQR+  FV++DL+ERFL+RTGEASLWW R
Sbjct:    1 MAREKPASGADVGWSPHRLPSFVGEHGRLVDPCDSREDPIVCAALVKANVYVDLEDVLEAEREFWKNTGVSIRVEDLRHRVQLVLADFRDVLLTMFTDYSERESGLERLAVA------PATNPATLDAEKANGSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASAPAMALEQASIPTTSVAASPFPGLLALEECPTRLQRASSPARTERIRAAGVSPVWSVGAGEGDEAEPCGGGTGMGTR-----GDRALVEKLSMSGAQFLDLVSNCEVLEGRFGWAAGASVIHRVTREGRNRKTARSLEILG---------------------CPGAHGGVDTSPKTENSDSAASARNTRCRPSSAGSGNPRRPQTKRGKQAPRKGRGGQRSGESPANSGRAVAAVEASGLSGAAMDDYVRGDGSDQSGXXXXXXXXXXXSKTGN---NTSDCQAG-----------------VNRHNEIGKLHEMPKKSAQDGQGGGKD-EETESLSKEAAFLKARAPQENQLV----SVGLPLAHHRLRFAFEQHLLPEVLNTSRASTRQADREISDIMEA------------------------------------------------------------------------------------------LDSRLTLREACRICAAVTGFVAIACPARQQATTRRRRGEENGLSGHPEGEEK-----EEEALLSIGDDSMGPEEFSRAVFHCGDLKTRDGLCPVSQRVGLFVVHDLYERFLERTGEASLWWTR 635          
BLAST of mRNA_F-serratus_M_contig86.19989.1 vs. uniprot
Match: A0A6H5JM25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM25_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 5.410e-46
Identity = 197/657 (29.98%), Postives = 254/657 (38.66%), Query Frame = 0
Query:  159 MGADKPVFTADDDWSLYKLSPSTKGRGELVNPYDSREDPIVCGALVGANSLISLDDVLDAERNFWQKAGLSVKVDDLRHRVQLVLEDFKYVLNTLFLEYCKRASGLSMLAV-------------------------------------------SDRKAFVPGNGGALIPVEEHPQEDAP--------------------------RAPSIGDSDSATRSTSSXXXXXXXXXNSTPDRRFAPINFLGWEE-EEVSSRLQRVGGTGATRRPLTVNAM----IERFRKQETKQDRDGEAVGTNAQSCDGYDSFVTQRCMTGPQFLDLANDCTLLKGCFGWEAAARVVHRVCRVGRDAKALWSKEIVG-----------------DLDVDAED--KRLSPPW------------RGSPGECEGRRENTCSSGNTSTSVSASSTSISTCS--------NSDDAAGSAVLTVGPTPRAKSRHGHDDKAIDVGEAGD----GVSPGVGNYDGGSARQSSTTTSWPRTATPLSKEAAFLLATEDTEGGQGPMIFPEFVEALARLCLERYAPLSPWTPAPTRPPPAAKGHGKRPVDSRGMLPDCKGRSLARGQNTNLTTPSRSLGPALAPHRLRFAFERHLLYEVVNISQAPTKRTNREIDDMME 698
            M  +KP   AD  WS ++L       G LV+P DSREDPIVC ALV AN  I L+DV +AER FW+  G+S+KV+DLRHRVQLVL DF+ VL T+F +Y +R SGL  LAV                                           S        +  A+    E    D                            R P     D+A                S P    A   F G    EE  +RL+R        R           +      E +    G  +GT+     G  + V +  M+G QFLD  ++C +L+G F W A A V+HRV R GR+ K   S EI+G                 D++V   +  +R  P              RG     +GR  +      T   V+A+  S  + +        +  D +G           +KSR+   D    V +  +       P     DG    +   T S       LSKEAAFL  T DTEGGQG M+FPEFVEAL RLCL+RYAP   W         A +  G                     Q   L     S+G  LA HRLRFAFE+HLL E            +REI D+ME
Sbjct:    1 MAREKPASGADVGWSPHRLPSFVGEHGHLVDPCDSREDPIVCAALVKANVYIDLEDVFEAEREFWKNTGVSIKVEDLRHRVQLVLADFRDVLLTMFTDYSERESGLERLAVAPATNPAKLNAEEANGSKKXXXXXXXXXXXXXXXXXXXXXXNGSVTSGSTNNSASAVAMALEQASADCDCDGRLLEAITVRTTDDLLSASLGGLQRIPGSEGVDTAFIIPPGAPPSAPSFQASIPTTSVAASPFPGLRALEECPTRLERASSPARIERIRAAGVSPVWSVGAREGDEAEPFGGGTGLGTH-----GERALVEKLSMSGAQFLDFVDNCEVLEGRFSWAAGASVIHRVTREGRNRKTARSIEILGCPGAHGGVDTSPKTKNSDMEVSGRNTTRRCRPSSAASGNPRRPQTKRGEQAPHKGRGGHRSGESPTKGGVAAAEASGQSGAAMGDRVRGDGSDKSGGXXXXXXXXTTSKSRNNTSDCQAGVNQQNEIGKLHEMPKKPAQDGLGGGEDIETES-------LSKEAAFLKVTGDTEGGQGGMLFPEFVEALTRLCLKRYAP---WV--------APRNQGPXXXXXXXXXXXXXXXRPRAPQENQLV----SVGLPLAHHRLRFAFEQHLLPEA-----------DREISDIME 619          
BLAST of mRNA_F-serratus_M_contig86.19989.1 vs. uniprot
Match: A0A6H5JFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN5_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.940e-29
Identity = 65/123 (52.85%), Postives = 81/123 (65.85%), Query Frame = 0
Query:  787 LEILDSRLTAREACRICATVMGLVIVANGQERGAGM----GAVSQLSQKNRPRSSIDGD-VLFSVGEDSMALEDFTRMVFHCGNLKTWDGVCSISQRMDAFVLNDLFERFLDRTGEASLWWNR 904
            L+ LDSRLT  EACRIC  V G V +A    + A      G  + LS    P     G+  L S+G+DSM  E F+R VFHCG+LKTWDG+C +SQR+  FV++DL+ERFL+RTGEASLWW R
Sbjct:   15 LQALDSRLTLHEACRICTAVTGFVAIACPARQQATTRRRRGEENGLS--GHPEGEEKGEEALLSIGDDSMDPEQFSRAVFHCGDLKTWDGLCPVSQRVGRFVVHDLYERFLERTGEASLWWTR 135          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig86.19989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDA4_ECTSI2.330e-6729.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM25_9PHAE5.410e-4629.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFN5_9PHAE1.940e-2952.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 12..45
e-value: 0.31
score: 20.1
coord: 98..131
e-value: 37.0
score: 10.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 5..151
e-value: 1.9E-14
score: 55.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..140
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 12..45
score: 8.014
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 63..131
score: 9.261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig86contigF-serratus_M_contig86:648021..680774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig86.19989.1mRNA_F-serratus_M_contig86.19989.1Fucus serratus malemRNAF-serratus_M_contig86 647970..681184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig86.19989.1 ID=prot_F-serratus_M_contig86.19989.1|Name=mRNA_F-serratus_M_contig86.19989.1|organism=Fucus serratus male|type=polypeptide|length=908bp
MEAYLARSSAEATAFRRRGEAAFRAGRYTESIRAFTLAIDITRKLFREGN
GADHQLTNEHNLSRLLFRRGNASLHVEAGDREAVRDFDASLALQPAQYLT
LLQKGKTLLRMKEHAGASRAFLGALRAAPGNKELQRLFRRSILGLRENSQ
RYVPRWRGMGADKPVFTADDDWSLYKLSPSTKGRGELVNPYDSREDPIVC
GALVGANSLISLDDVLDAERNFWQKAGLSVKVDDLRHRVQLVLEDFKYVL
NTLFLEYCKRASGLSMLAVSDRKAFVPGNGGALIPVEEHPQEDAPRAPSI
GDSDSATRSTSSTSGGDDGNNNSTPDRRFAPINFLGWEEEEVSSRLQRVG
GTGATRRPLTVNAMIERFRKQETKQDRDGEAVGTNAQSCDGYDSFVTQRC
MTGPQFLDLANDCTLLKGCFGWEAAARVVHRVCRVGRDAKALWSKEIVGD
LDVDAEDKRLSPPWRGSPGECEGRRENTCSSGNTSTSVSASSTSISTCSN
SDDAAGSAVLTVGPTPRAKSRHGHDDKAIDVGEAGDGVSPGVGNYDGGSA
RQSSTTTSWPRTATPLSKEAAFLLATEDTEGGQGPMIFPEFVEALARLCL
ERYAPLSPWTPAPTRPPPAAKGHGKRPVDSRGMLPDCKGRSLARGQNTNL
TTPSRSLGPALAPHRLRFAFERHLLYEVVNISQAPTKRTNREIDDMMERY
APRLKKIFVFFAVDGPSIMPAPSSGPTVSGASLETASAAATESSERKDRA
SAETFKAKRRRMPHHLGRNMKDIRLSVREFLGMLRSLEILDSRLTAREAC
RICATVMGLVIVANGQERGAGMGAVSQLSQKNRPRSSIDGDVLFSVGEDS
MALEDFTRMVFHCGNLKTWDGVCSISQRMDAFVLNDLFERFLDRTGEASL
WWNRGTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom