mRNA_F-serratus_M_contig86.19981.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig86.19981.1
Unique NamemRNA_F-serratus_M_contig86.19981.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: A0A6H5K481_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K481_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.370e-25
Identity = 92/292 (31.51%), Postives = 118/292 (40.41%), Query Frame = 1
Query:    4 SLVVGDVNGDGYSDIVVPFGYM--VAWYQSETGLG-FSEANDISGS--GAEWTEIADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYEN 864
            S+ V D+NGDG+ D+VV F Y   V WY++  GLG FS   DI+    GA   + AD DGD D D+++ S   DRVTWYENTDG+GTF+VG DI+ T                                                                                         SS  D+ V                  A D+D DE +D+V +S   D ++WF+N DG+G F+    +     G   V A DLD DGDLDVV+ S     G VTWYEN
Sbjct:  106 SVAVADLNGDGFPDVVVAFPYSDTVTWYRNSDGLGSFSLGVDIATDTDGAWVVKCADVDGDGDFDIISVSSFDDRVTWYENTDGEGTFAVGLDISAT-----------------------------------------------------------------------------------------SSGADMAV------------------AADIDGDEAVDIVVASFDDDRVTWFKNTDGKGAFALGVDLAQDANGATYVAAGDLDGDGDLDVVSGSYY--DGRVTWYEN 288          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: D7FHI7_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 6.780e-21
Identity = 104/303 (34.32%), Postives = 140/303 (46.20%), Query Frame = 1
Query:    4 SLVVGDVNGDGYSDIVVPFG--YMVAWYQSETGLG-FSEANDIS----GSGAEWTEIADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDE---------ISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYEN 864
            S+ VGD+NGDG  D+VV F   + + W+ +  GLG FS   DI     G  +   ++AD DGD D+DV+  S  GDRVTWYENTDG+ TF+VG DI+TTA+                            XXXXXXXXXXXXXXXXXX                                                   P ++    +     V   D+D D D+D++++S   +          I W EN DG G+F+    VG++      V+A DLD+DGD+D+VA   +   GS+ WYEN
Sbjct:  115 SIDVGDLNGDGSPDVVVAFQTTFQLTWFSNLYGLGEFSVGADIDTYEDGDQSRSVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFAVGVDISTTADGAITLALADLDGDDDLDVISASVFSGLAXXXXXXXXXXXXXXXXXX---------------------------------------------------PADDPAGGKD----VVTADIDGDGDIDIISASFDGNHTAGSFPDGRILWLEN-DGSGSFAEGRDVGLLDSAR-NVVAVDLDNDGDIDLVAC--DGVGGSIVWYEN 358          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: D7FHI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI6_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.750e-20
Identity = 101/303 (33.33%), Postives = 138/303 (45.54%), Query Frame = 1
Query:    4 SLVVGDVNGDGYSDIVVPFG--YMVAWYQSETGLG-FSEANDIS----GSGAEWTEIADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDE---------ISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYEN 864
            S+ VGD+NGDG  D+VV F   + + W+ +  GLG FS   DI     G  +   ++AD DGD D+DV+  S  GDRVTWYENTDG+ TF++G DI+TTA+                            XXXXXXXXXXXXXXXXX                                                    P ++    +     V   D+D D D+D++++S   +          I W EN DG G+F+    VG++      V+A DLD+DGD+D++A   E   G + WYEN
Sbjct:    5 SIDVGDLNGDGSPDVVVAFQTTFQLTWFSNLDGLGEFSVGTDIDTYEDGDQSRSVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVISASVFSGLAXXXXXXXXXXXXXXXXX---------------------------------------------------EPADDPAGGKD----VVTADIDGDGDMDIISASFDGNHTAGNFPDGRILWLEN-DGLGSFAEGRDVGLLDSAR-NVVAVDLDNDGDIDLLAC--ENVGGHIVWYEN 248          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: A0A1F3PQL1_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3PQL1_9BACT)

HSP 1 Score: 102 bits (255), Expect = 5.340e-20
Identity = 76/295 (25.76%), Postives = 115/295 (38.98%), Query Frame = 1
Query:    1 RSLVVGDVNGDGYSDIVVPF--GYMVAWYQSETG---LGFSEANDISGSGAEWTEIADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIH--VLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYEN 864
             S+  GD++GDG  D++        +AWY++  G    G  +   I+ +GA      D DGD D+DV++ S   +++ WYENTDG GTF     +T  AN P                                                                                     + +  I   +    +N+   RS Y+     DLD D D+D++++S   D+I+W+EN DG GTF    I+       + V +ADLD DGD+DV++AS       + WYEN
Sbjct:  245 NSVYCGDIDGDGDMDVLSASEDDNKIAWYENTDGNGTFGTQQVISINANGATSVYCGDIDGDGDMDVLSASEDDNKIAWYENTDGNGTFGTQQVLTIAANTPESICSADIDGDGDMDVLSASFHDDKIAWYENTDGSGTFGTQQSITTDANGARDVCCADIDGDGDMDVLSASSTDDKIAWYENTDGNGSFGIQQVITTVADNA---RSVYSA----DLDGDGDMDVLSASEDDDKIAWYENTDGNGTFGVQQIISTTAYYALSVYSADLDSDGDMDVLSASATEYEDKICWYEN 532          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: A0A3L9Y8Z0_9FLAO (Putative secreted protein (Por secretion system target) n=1 Tax=Ulvibacter antarcticus TaxID=442714 RepID=A0A3L9Y8Z0_9FLAO)

HSP 1 Score: 101 bits (251), Expect = 8.110e-20
Identity = 78/293 (26.62%), Postives = 113/293 (38.57%), Query Frame = 1
Query:    4 SLVVGDVNGDGYSDIVVPFGY--MVAWYQSETGLGFSEANDISGSGAEWTE---IADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYENL 867
            S++  D++ DGY D++        +AWY++  GLG      I    A++      AD DGD D+DV++ S+  D++ WYEN DGQGTFS    IT+  ++                                                                                       +   +      +   A  S+   + A DLDND D DL+++S   DEI WFENMDG G F    I+        +V + DLD DGD+DV +ASL      + WYEN+
Sbjct:   40 SVISADIDSDGYKDVLSASTEDGKIAWYRNLDGLGTFGPQLIISENADYATSVYAADIDGDGDLDVLSASFNDDKIAWYENLDGQGTFSTEQIITSLLDSALVILAQDVDGDGDLDVIAGSNGNSEIVWFENQNGLGQFSGPIDISENNTATESILAIDFDGDNDIDLVAALDYENKIVWY-----ENTDGLGNFGSRQVITADVSASLSIFASDLDNDGDFDLLSTSFVEDEIVWFENMDGNGNFGTKQIITSNADRPYEVYSEDLDGDGDMDVFSASLS--DNKIAWYENI 325          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: A0A1F3PTM3_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Bacteroidetes bacterium RIFOXYA12_FULL_38_20 TaxID=1797368 RepID=A0A1F3PTM3_9BACT)

HSP 1 Score: 100 bits (249), Expect = 3.240e-19
Identity = 75/296 (25.34%), Postives = 119/296 (40.20%), Query Frame = 1
Query:    4 SLVVGDVNGDGYSDIVVPFGY--MVAWYQSETGLGFSEANDISGS---GAEWTEIADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYAC-VAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYENLLI 873
            S+   D++GDG  DI+        +AWY++  G G      +  S   GA+    AD DGD D+DV++ S   D++ W+EN DG GTFS    I+T AN+P                                                                                     +    +  +      ++  + YA  +   DLD D D+D++++S G D+I+W+EN DG G F     +  +    + V +AD+D DGD+DV++AS++     + WYENLL+
Sbjct:  450 SIYCTDLDGDGDIDILSASSDDDKIAWYENIDGNGSYSIQQVITSVANGAQCVSSADLDGDGDMDVLSASKDDDKIAWFENIDGYGTFSFQQIISTAANSPRSVNCADLDGDGDLDVISASYQDDKIAWYENTDGFGTFGTQNVVTTLADAAHSINSADLDGDGDIDLLSASYYDDKIAWYENVDGNGTFGVQQI------ISTLADYAVSIFPADLDGDGDMDVLSASKGDDKIAWYENTDGNGAFGPQQAITTIADFAMSVYSADIDGDGDMDVLSASVD--DDKIAWYENLLV 737          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: A0A2N2Y9D1_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-2 TaxID=2013688 RepID=A0A2N2Y9D1_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 1.190e-18
Identity = 83/294 (28.23%), Postives = 110/294 (37.41%), Query Frame = 1
Query:    1 RSLVVGDVNGDGYSDIV--VPFGYMVAWYQSETGLG-FSEANDISGSGAEWTEIA--DFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYENL 867
             S V  D++GDG  DIV  +     VAW+++  GLG F     IS + A    +   D DGD D+D+VA S G   +TW+EN DGQG+F     I T   NP                                                                                                          +  +   DLD D D+D++ ++ GSD ISWFEN+DG G FS   I+   T     V AAD+D+DGDLDV++AS     G + WYENL
Sbjct:  136 NSAVAADLDGDGDLDIVTAIDLESKVAWHENLNGLGSFGPQQIISSTNANCRSVIALDMDGDGDLDIVANSSGSINLTWFENLDGQGSFGPKIIINT---NPTPIY------------------------------------------------------------------------------------------------------FNKIVGFDLDGDGDMDILGANPGSDRISWFENLDGLGNFSPEKIISTETDFARSVYAADIDNDGDLDVLSASAI--DGKIAWYENL 322          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: I3YSM9_AEQSU (Por_Secre_tail domain-containing protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) TaxID=746697 RepID=I3YSM9_AEQSU)

HSP 1 Score: 97.4 bits (241), Expect = 1.600e-18
Identity = 80/293 (27.30%), Postives = 111/293 (37.88%), Query Frame = 1
Query:    4 SLVVGDVNGDGYSDIVVPFG--YMVAWYQSETGLG-FSEANDISGSGAEWTEI--ADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYENL 867
            S+   D++GD   DIV        +AWYQ+E GLG F     I+ +  E T +   D D    +DVVA S   D+V W+EN DG GTF     IT+ A+                                                                                        +   + V  P++       S   V A DLD D D+D++A+S   D + WFEN+DG G+F    ++     G + V AAD+D DGD DV+AA    G G + WYEN+
Sbjct:   34 SIYSTDIDGDDRKDIVCAISGENKIAWYQNEDGLGNFGSQRIITSNLQETTTVIAVDIDXXXXMDVVAVSGPQDKVVWFENLDGLGTFGTQRLITSAADGAIGLHASDIDGDGDFDILSASFLDNKIAWY--------------------------------------------------------ENTDGLGVFGPQKLLTNSALSTRDVYAEDLDGDGDMDVIAASTADDRVIWFENLDGLGSFGPLKVINNNANGVISVRAADIDGDGDKDVIAAIF--GDGKIVWYENM 268          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: UPI0004149C7C (T9SS type A sorting domain-containing protein n=1 Tax=Aequorivita capsosiphonis TaxID=487317 RepID=UPI0004149C7C)

HSP 1 Score: 96.7 bits (239), Expect = 2.150e-18
Identity = 76/292 (26.03%), Postives = 116/292 (39.73%), Query Frame = 1
Query:    7 LVVGDVNGDGYSDI--VVPFGYMVAWYQSETGLG-FSEANDISGSGAEWTEI--ADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYENL 867
            +   D++GDG  D+  +  FG ++ W+++  GLG FS    I  S    +EI  AD D D D DVV  S G + + W+ENT+G G F     IT   N                                                                                        +   +    P++   +   +   V ++DLDND D+D++++S   D++ WFEN+DG GTFS   ++  +T     V AAD+D+DGD DV++AS+      + WYENL
Sbjct:   41 VAAADIDGDGDMDVLGISGFGNLIVWFENMDGLGNFSSQRIIDASTILPSEIITADLDDDGDKDVVISSRGENAIIWFENTNGLGDFGPKQTIT---NGAMSGLSVYAADLDGDMDIDLVATSSGNKRLYWYENLDGLGTFGPDQLIVETLDYGGFVSVFAIDIDGDDDNDVLAAEFGGDTLSWFENTDGLATFGPQQIITSTLITPFMVFSIDLDNDGDVDVLSASGTDDKVVWFENIDGVGTFSTEKVISTLTDNPRSVYAADIDNDGDNDVLSASI--ADNKIAWYENL 327          
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Match: UPI00165541A0 (T9SS type A sorting domain-containing protein n=1 Tax=Kordia aestuariivivens TaxID=2759037 RepID=UPI00165541A0)

HSP 1 Score: 98.2 bits (243), Expect = 2.200e-18
Identity = 76/295 (25.76%), Postives = 112/295 (37.97%), Query Frame = 1
Query:    1 RSLVVGDVNGDGYSDIVVPFGYM---VAWYQSETGLGFSEANDISGSG---AEWTEIADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKDIHVLNPEENSVAYRSSYA-CVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGIVTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYEN 864
            +S+   D++GDG  D +   G     +AW+++  G G      I  +    AE     D DGD DIDV++ SY  +++ WYENTDGQGTF     ITT A+N                                                                                                    ++ Y + +A  V A D+D D D+D++++S G D+I+W+EN DG+G F    ++         V A DLD DGD+DV++AS       + WYEN
Sbjct:  395 KSVYAADIDGDGDLDAISGSGGSFGNIAWFENTDGQGSYGPQKIITTDIDDAESVFAIDLDGDGDIDVLSASYDDNKIAWYENTDGQGTFGPQQIITTGASNAESVYAADLDGDGDMDIVSTYSTISSVVWFENTDGQGNFGA---------------------------------------------------------RQTITYNADFAQAVYAEDIDGDGDMDILSASSGDDKIAWYENTDGQGNFGTQQVISTNADSASSVYAIDLDGDGDIDVLSASR--ADDKIAWYEN 630          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig86.19981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K481_9PHAE1.370e-2531.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHI7_ECTSI6.780e-2134.32N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7FHI6_ECTSI2.750e-2033.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1F3PQL1_9BACT5.340e-2025.76Por_Secre_tail domain-containing protein n=2 Tax=B... [more]
A0A3L9Y8Z0_9FLAO8.110e-2026.62Putative secreted protein (Por secretion system ta... [more]
A0A1F3PTM3_9BACT3.240e-1925.34Por_Secre_tail domain-containing protein n=1 Tax=B... [more]
A0A2N2Y9D1_9BACT1.190e-1828.23Por_Secre_tail domain-containing protein n=1 Tax=B... [more]
I3YSM9_AEQSU1.600e-1827.30Por_Secre_tail domain-containing protein n=1 Tax=A... [more]
UPI0004149C7C2.150e-1826.03T9SS type A sorting domain-containing protein n=1 ... [more]
UPI00165541A02.200e-1825.76T9SS type A sorting domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig86contigF-serratus_M_contig86:343309..347533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.1
Seed ortholog evalue1.9e-20
Seed eggNOG ortholog2880.D7FHI7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
EggNOG OGs29QRV@1,2RX97@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1173
Cds size1173
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig86.19981.1prot_F-serratus_M_contig86.19981.1Fucus serratus malepolypeptideF-serratus_M_contig86 343309..347533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932527.1194663-CDS-F-serratus_M_contig86:343308..3435161622932527.1194663-CDS-F-serratus_M_contig86:343308..343516Fucus serratus maleCDSF-serratus_M_contig86 343309..343516 +
1690964350.379324-CDS-F-serratus_M_contig86:343308..3435161690964350.379324-CDS-F-serratus_M_contig86:343308..343516Fucus serratus maleCDSF-serratus_M_contig86 343309..343516 +
1622932527.1339102-CDS-F-serratus_M_contig86:344235..3444611622932527.1339102-CDS-F-serratus_M_contig86:344235..344461Fucus serratus maleCDSF-serratus_M_contig86 344236..344461 +
1690964350.3929203-CDS-F-serratus_M_contig86:344235..3444611690964350.3929203-CDS-F-serratus_M_contig86:344235..344461Fucus serratus maleCDSF-serratus_M_contig86 344236..344461 +
1622932527.1510313-CDS-F-serratus_M_contig86:344854..3451911622932527.1510313-CDS-F-serratus_M_contig86:344854..345191Fucus serratus maleCDSF-serratus_M_contig86 344855..345191 +
1690964350.410099-CDS-F-serratus_M_contig86:344854..3451911690964350.410099-CDS-F-serratus_M_contig86:344854..345191Fucus serratus maleCDSF-serratus_M_contig86 344855..345191 +
1622932527.1718447-CDS-F-serratus_M_contig86:346186..3464991622932527.1718447-CDS-F-serratus_M_contig86:346186..346499Fucus serratus maleCDSF-serratus_M_contig86 346187..346499 +
1690964350.4210906-CDS-F-serratus_M_contig86:346186..3464991690964350.4210906-CDS-F-serratus_M_contig86:346186..346499Fucus serratus maleCDSF-serratus_M_contig86 346187..346499 +
1622932527.195149-CDS-F-serratus_M_contig86:347444..3475331622932527.195149-CDS-F-serratus_M_contig86:347444..347533Fucus serratus maleCDSF-serratus_M_contig86 347445..347533 +
1690964350.4334347-CDS-F-serratus_M_contig86:347444..3475331690964350.4334347-CDS-F-serratus_M_contig86:347444..347533Fucus serratus maleCDSF-serratus_M_contig86 347445..347533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig86.19981.1

>prot_F-serratus_M_contig86.19981.1 ID=prot_F-serratus_M_contig86.19981.1|Name=mRNA_F-serratus_M_contig86.19981.1|organism=Fucus serratus male|type=polypeptide|length=391bp
RSLVVGDVNGDGYSDIVVPFGYMVAWYQSETGLGFSEANDISGSGAEWTE
IADFDGDDDIDVVACSYGGDRVTWYENTDGQGTFSVGFDITTTANNPTSV
FAADLDGDDDIDILVSDGDGVMWFENTNGGGAFSPYPVSVEADAGFVTVA
DLDGDGDDDIIAVFGADDQVFWYENTDGAGNFSSAKDIHVLNPEENSVAY
RSSYACVAAVDLDNDEDLDLVASSVGSDEISWFENMDGEGTFSAANIVGI
VTPGTVKVIAADLDDDGDLDVVAASLEPGSGSVTWYENLLIDAEDIIPAT
TPPASTSDDATNLTSSPTITPPTNTPAIGGGTNPTVPPPTNAPTDEEGTA
PTVIPATTPPASDSHILEIIIGVLVSVFSAIVLGAAKCCFS
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mRNA from alignment at F-serratus_M_contig86:343309..347533+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig86.19981.1 ID=mRNA_F-serratus_M_contig86.19981.1|Name=mRNA_F-serratus_M_contig86.19981.1|organism=Fucus serratus male|type=mRNA|length=4225bp|location=Sequence derived from alignment at F-serratus_M_contig86:343309..347533+ (Fucus serratus male)
AGATCTCTCGTAGTCGGGGATGTAAATGGTGACGGATATTCAGACATCGT CGTCCCTTTTGGGTATATGGTGGCATGGTACCAAAGTGAAACGGGCCTGG GGTTCTCGGAAGCAAACGATATCTCCGGATCCGGAGCTGAGTGGACAGAA ATAGCCGACTTCGACGGAGACGACGATATCGACGTCGTGGCATGCAGCTA TGGCGGAGGTGCGCAAGAAAGGCGGGAATGGTTGGCTGCACCACGCGCAG ACAGGCGTGGGCGGCGCCGCGGGAGACGAAATATTTGAAAAAAGCTTCCG TCGGTGGGCAAGGGCGCCATGCGATGTTGTTTTACTGAATGTCACCATAC AGCAGTTCAGCGTCAACTTTCCTCAGCTATTGAGGTCGCTTTCATAAAGG TGTTGCTCTACCAAGCTAGCCCTGGCGGTTAGGGGCGAATTATGCGCGTT TCCGGTACGCGTATTTGGCCCCTTCGACAACGTCGACAGAGAACGCAAAA CCTGGGTGAATAGTCGAATGAAGTTGTTTGCCGTAGAGAACGCACCACCG GCTTCAGAACTTGGCACGTACGAACTTCAGCATCAAAGTATCCATCCACA ACATGGGAATTCGCCCACAAGAACACGTGCATGCTCACTTTCGGCATTCA CACTTAAACCTATCTAAGGATAAGAAACAGTCTATTGGCGCCCCTACGGA AGAACAAGAAACGAGCGTCGGCCAACATAGGTGGTTGCGGCGCGTTCTGT GCCTTTGATGAGCGGACAGCCGTTTCAGATACCTCTGCCCCATTCTGCTT CGCACGCTACTCTGCTCGATTTCACACGAGCTTCCACCTTTGTATACTGT ACACTACATGTCGAATGCCTAAAAATGTTGTCTTCAATGCCAGCGTCTTT GCATATGCTCGCTGAACAACGCCGCAGATCGAGTGACCTGGTACGAAAAC ACGGACGGGCAAGGGACGTTCTCGGTTGGTTTCGACATCACGACCACAGC AAACAACCCAACATCGGTGTTCGCGGCGGACCTCGACGGCGACGATGACA TCGATATCCTGGTTTCTGACGGTGACGGGGTGATGTGGTTCGAGAACACC AACGGGGGAGGGGCCTTCTCCCCTTACCCAGTTTCTGTCGAAGCGGACGC CGGGTTCTCGAGGTGAGGGAAGAAACAGAGAAGCCCCTCGTTCAATACGG GTTGTCTGTCGCTTGGTGCCGCGCTCACATTGGTCACTCATCCCGCCGGA AGGTCTAGGTTGGGATGGATCCAAGCCGTCGGCACACGTAACTTGCCATT CAAACTGTCGACACTTTAAGCGTTTTGATTACTTTCTCGGGTAATGGCCG TCTCCTCCCTATTCCGGCGAAAAAACCGTTAACAAGCACCTCTTCCGCTA CTTCTGCGCGGCGGCACTTCCAACGATAAGACTGTCCCGACGAAGGAAGG CAGCAATGTAGCCACCACCGCCATATCGTGGCTTAACGCCCTTCCTTGTT GTTGCTCTCTCGCCTCTTGTCGATCCAACTGAAAATCACCGAAAAGGTTC GTAACCGTCGCCGATCTCGACGGAGACGGGGACGACGACATAATAGCGGT GTTCGGCGCCGATGACCAAGTGTTCTGGTACGAGAACACCGACGGAGCGG GGAACTTCTCGTCCGCGAAGGACATTCACGTCTTGAACCCAGAAGAAAAC TCGGTAGCATACCGCTCGTCCTATGCGTGTGTCGCCGCGGTGGATCTCGA CAACGACGAGGACCTTGACCTAGTGGCCAGCAGCGTTGGGAGCGACGAGA TCTCGTGGTTTGAGAACATGGACGGAGAAGGGACCTTCTCAGCTGCCAAC ATCGTCGGCATCGTTACCCCTGGCACCGTAAAGGTGGGTCGAGAGAACGG GATGCTCTCGTGCGCCCGTTCATTCCCTGTTACATGCCAATGTTACGCTC GATTCTCGAACAAAACCAAGAGGCAGGGCGATTGGGTGGATGTGATCGAC GTCAGTCTGTTGCTTCCAGCCCGGCGATGTGAAGAAGCTTTCAAGACCGG GAAAAGCGTCCCGAGAAGGAACAAAGTACAGATGGTGCCTCCACCTGAAG AACTGGCACTTGCACGAAATTCATGCTCAAACAAATGCCTCGTAATAAAA ATATTCGAAAATGTGACGACAACTTGCCCACAAGAGCACATGCTCACTCT CGACGCTGGAACAAGAACAACAGGCACGGTGGGATGGGGTGGGTGGGTGG GTGTGATCGACGTCAGTCTAATGCTCCTGCACGGCGGTGTGCAGACTCCT GAAGACTGGGGAAAGCGTCCCGAGCGGGAGCAAACTAGGACCACTCTGAT GCGACATACAAGGCCGACCCTGAAATTGCTAATTTTAAGGCCGATTTGGA GATAAAGCATCAGACATGTTCGTAGCTGCCCGCGGTTACAGCTCATCGGC TGGTCCCCTTGTGGGCAAGCTTTCAAAGATTTTCGCGCCTTGCCACATGG AGAGGAAGGGCGGCGGTGCTGACTTTCATTTTCCCGGCCACACTCACTCG CAAGCAGACCTCGTAATGTCAATCGTTTGTACGGGTGGTGCTTTAGTATA TAGCATAAGTGCACGAGTGCTTCCAGCGGGTTGCAAACCGGCATCGCGTC ACAAGGCTCACGGAATACTGACTGGTCCGTACGAAGGGGGATCTGGAATC CGCCGTTGTCTCCGCTCGCTGTGGGCAAATTAGTCAACGTTCAGGTCAAA GACAGGCAATGATGCACGTTATATGTACTGGTCGTGTTTTCCAGCCTTCC CATTGACTGTTCACCTCGTTCCACGTCCACACGGACCGATGTGTGTGTCC CGGGGCTGCTTGTGCACGAATGATCCAGGTTATCGCGGCCGACCTCGACG ACGACGGCGACCTCGACGTGGTGGCGGCCAGTCTCGAACCCGGGTCCGGC AGTGTCACCTGGTACGAAAACCTGCTCATAGACGCCGAGGACATCATCCC CGCCACGACACCACCCGCCAGTACCTCTGATGACGCGACCAACTTGACTT CATCGCCTACCATCACTCCTCCAACGAATACGCCAGCGATTGGAGGGGGT ACCAACCCAACGGTCCCACCTCCAACGAATGCTCCGACGGATGAAGAGGG CACCGCTCCGACGGTCATCCCCGCCACGACACCACCCGCCAGTACCTCTG ATGACGCGACCATCTTGACTTTATCGCCTGCCATCACTCCTCCAACGAAT ACGCCAGCGATTGGAGGGGGTACCAACCCAACGGTCCCACCTCCAATGAA TGCTCCGACGGATGAAGAGGGCACCGCTCCGACGGGTGCTCCAACAGAGA CAGGTAGAACACGGGTTTTTTTATCGGGGGGGGTTGCATTAGGCCCTGGG TATATGCATGTATAACGCTTGTGAAATAATATCTGGGGGATTGTTATTAT TTCGTTTGCTTTCCGACAATTGCAGATGTACCTGAGAAATCATTCACTCA ATGTCTCACACTTTACATAAGTGATTCGGATATGTACGGACTACGTAGTG TTCCACATGCTTGCGTACTGGCGTTCCTCTATTTGACGTCGAACTCATAC CCAAACATTACCCACTCCATAGCAAGCCTTGCATCTACTTTAGACTGATT CATCACCATGGCCATACCCCTTTCTCTGCCGAAACGTCGCTGAAACACGC ATGATGCATGAAAAAGTTGTACCAAGCTCGGTGTTCGGCTACTCAATGAA GCAATTTTTGAAGTGCCAGGTTGTTGTTTTAGGTTTTGGAATCAATATTT CCACATTCCCGTAGAGTGCAGACAGGTAGAATCGTCAACAACGCTGTGCT TGATCATTTTGTCGCTAGCGGTCCGAATAGTTGCTTACCCACAAAGACCA CCTCGAGATTCAAAACAATATCGTATATGTTCATGACGGTTTCACTCCGT CTATGGGCCCCTCGAGTAGCGTTAAAAGCGCTGGCATCGAAAACGACGAA ATCCTGCCGAAGTACAAAGATCGGATGCGTATGTAGGAGATATCTGCAGG GCATAGGCCCACCATAGTCGGGTACTACAGAGCTCTTGGTTTCAACACAC TTGTCTACTATTCCTCACAAAATAAATGCACCACAGGCGACAGCCACATC TTGGAGATTATCATCGGGGTGCTTGTCTCGGTGTTCAGCGCGATAGTTTT AGGGGCGGCCAAATGCTGCTTCTCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig86:343309..347533+

>mRNA_F-serratus_M_contig86.19981.1 ID=mRNA_F-serratus_M_contig86.19981.1|Name=mRNA_F-serratus_M_contig86.19981.1|organism=Fucus serratus male|type=CDS|length=2346bp|location=Sequence derived from alignment at F-serratus_M_contig86:343309..347533+ (Fucus serratus male)
AGATCTCTCGTAGTCGGGGATGTAAATGGTGACGGATATTCAGACATCGT
CGTCCCTTTTGGGTATATGGTGGCATGGTACCAAAGTGAAACGGGCCTGG
GGTTCTCGGAAGCAAACGATATCTCCGGATCCGGAGCTGAGTGGACAGAA
ATAGCCGACTTCGACGGAGACGACGATATCGACGTCGTGGCATGCAGCTA
TGGCGGAGAGATCTCTCGTAGTCGGGGATGTAAATGGTGACGGATATTCA
GACATCGTCGTCCCTTTTGGGTATATGGTGGCATGGTACCAAAGTGAAAC
GGGCCTGGGGTTCTCGGAAGCAAACGATATCTCCGGATCCGGAGCTGAGT
GGACAGAAATAGCCGACTTCGACGGAGACGACGATATCGACGTCGTGGCA
TGCAGCTATGGCGGAGATCGAGTGACCTGGTACGAAAACACGGACGGGCA
AGGGACGTTCTCGGTTGGTTTCGACATCACGACCACAGCAAACAACCCAA
CATCGGTGTTCGCGGCGGACCTCGACGGCGACGATGACATCGATATCCTG
GTTTCTGACGGTGACGGGGTGATGTGGTTCGAGAACACCAACGGGGGAGG
GGCCTTCTCCCCTTACCCAGTTTCTGTCGAAGCGGACGCCGGATCGAGTG
ACCTGGTACGAAAACACGGACGGGCAAGGGACGTTCTCGGTTGGTTTCGA
CATCACGACCACAGCAAACAACCCAACATCGGTGTTCGCGGCGGACCTCG
ACGGCGACGATGACATCGATATCCTGGTTTCTGACGGTGACGGGGTGATG
TGGTTCGAGAACACCAACGGGGGAGGGGCCTTCTCCCCTTACCCAGTTTC
TGTCGAAGCGGACGCCGGGTTCGTAACCGTCGCCGATCTCGACGGAGACG
GGGACGACGACATAATAGCGGTGTTCGGCGCCGATGACCAAGTGTTCTGG
TACGAGAACACCGACGGAGCGGGGAACTTCTCGTCCGCGAAGGACATTCA
CGTCTTGAACCCAGAAGAAAACTCGGTAGCATACCGCTCGTCCTATGCGT
GTGTCGCCGCGGTGGATCTCGACAACGACGAGGACCTTGACCTAGTGGCC
AGCAGCGTTGGGAGCGACGAGATCTCGTGGTTTGAGAACATGGACGGAGA
AGGGACCTTCTCAGCTGCCAACATCGTCGGCATCGTTACCCCTGGCACCG
TAAAGGTTCGTAACCGTCGCCGATCTCGACGGAGACGGGGACGACGACAT
AATAGCGGTGTTCGGCGCCGATGACCAAGTGTTCTGGTACGAGAACACCG
ACGGAGCGGGGAACTTCTCGTCCGCGAAGGACATTCACGTCTTGAACCCA
GAAGAAAACTCGGTAGCATACCGCTCGTCCTATGCGTGTGTCGCCGCGGT
GGATCTCGACAACGACGAGGACCTTGACCTAGTGGCCAGCAGCGTTGGGA
GCGACGAGATCTCGTGGTTTGAGAACATGGACGGAGAAGGGACCTTCTCA
GCTGCCAACATCGTCGGCATCGTTACCCCTGGCACCGTAAAGGTTATCGC
GGCCGACCTCGACGACGACGGCGACCTCGACGTGGTGGCGGCCAGTCTCG
AACCCGGGTCCGGCAGTGTCACCTGGTACGAAAACCTGCTCATAGACGCC
GAGGACATCATCCCCGCCACGACACCACCCGCCAGTACCTCTGATGACGC
GACCAACTTGACTTCATCGCCTACCATCACTCCTCCAACGAATACGCCAG
CGATTGGAGGGGGTACCAACCCAACGGTCCCACCTCCAACGAATGCTCCG
ACGGATGAAGAGGGCACCGCTCCGACGGTCATCCCCGCCACGACACCACC
CGCCAGTTATCGCGGCCGACCTCGACGACGACGGCGACCTCGACGTGGTG
GCGGCCAGTCTCGAACCCGGGTCCGGCAGTGTCACCTGGTACGAAAACCT
GCTCATAGACGCCGAGGACATCATCCCCGCCACGACACCACCCGCCAGTA
CCTCTGATGACGCGACCAACTTGACTTCATCGCCTACCATCACTCCTCCA
ACGAATACGCCAGCGATTGGAGGGGGTACCAACCCAACGGTCCCACCTCC
AACGAATGCTCCGACGGATGAAGAGGGCACCGCTCCGACGGTCATCCCCG
CCACGACACCACCCGCCAGCGACAGCCACATCTTGGAGATTATCATCGGG
GTGCTTGTCTCGGTGTTCAGCGCGATAGTTTTAGGGGCGGCCAAATGCTG
CTTCTCAGCGACAGCCACATCTTGGAGATTATCATCGGGGTGCTTGTCTC
GGTGTTCAGCGCGATAGTTTTAGGGGCGGCCAAATGCTGCTTCTCA
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