mRNA_F-serratus_M_contig86.19980.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 470 bits (1209), Expect = 4.790e-162 Identity = 306/369 (82.93%), Postives = 319/369 (86.45%), Query Frame = 1
Query: 1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
MPSTLSKASGSVE ++ATTDIDRRCGD N TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYTALHH+VYH+HLAVS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NPLLSAYGSLPLGTAVYNGHL+VV ELVHWYG DRCT+DGG LALATAASRKHVDIVTFLCDAGVVDTEGVAL QGGN N TRAYVNM HGTLP+TY++FVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDE FIGTPL+LATSYFRRFSPM+VHRE+VRGLKGVIRLLRQEEAVHAVSW W
Sbjct: 1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTW 369
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 478 bits (1231), Expect = 4.270e-160 Identity = 328/369 (88.89%), Postives = 336/369 (91.06%), Query Frame = 1
Query: 1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
MPSTLSKASGS + +IATTDIDRRCG NQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NPLLSAYGSLPLG AVY+GHLEVVRELVHWYG DRCTSDGGALALATAASRKHVDIV FLC+AGVVDTEGVAL QGGNAN GTRAYVNMDHGTLP+TYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSY RRFS MKVHRE+VRGLKGVIRLL+QEEAVH+VSW W
Sbjct: 422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTW 790
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 2.050e-139 Identity = 315/417 (75.54%), Postives = 322/417 (77.22%), Query Frame = 1
Query: 1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVV-RELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL-----------------------------------------------------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
MPSTLSKASGS + +IATTDIDRRCGD NQTPLMVASVIG SRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSAYGSLPL RELV+WYGIDRCTSDGGALAL TAASRKHVDIVTFL DAGVVDTEGVAL QGGNAN GTRAYVNMDHGTLP+TY+EFVFQETPLVSTFNLGSFHAP FARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFS M VHRE+V LKGVIRLLRQEEAVH+VSW W
Sbjct: 7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTW 423
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 8.690e-134 Identity = 269/361 (74.52%), Postives = 279/361 (77.29%), Query Frame = 1
Query: 25 SGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
SGSVE IATTDIDRRCGD NQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSKD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA ELV+WYG D CTSDGGALALATAASR VDIVTFLCDAGVVDTEGVAL QG A+ +RAYVNMDHG+LP+TY+EFVFQE PLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPM+VHRE+VRGLKGVIRLLRQEEAVH+VSW W
Sbjct: 399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTW 759
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 192 bits (487), Expect = 4.150e-54 Identity = 138/339 (40.71%), Postives = 163/339 (48.08%), Query Frame = 1
Query: 103 VASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYG--SLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFI-GTPLDLATSYFRRFSPM-KVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
VAS +G RVVR LLR GA VS AD+DG TALH ++ +KHLAVSK NP+L+AY SLPL A NG L VVREL +GID C+ DGGA AL AAS+ VDIVTFL D GVVD EG+AL QG NAN RAY NM H T Y +F +TPLVS F LG F++PR RLLL AGAD S VR+ EG E + + TPL +A S + + ++ GLKGVIRLL+Q +AVHA SW W
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSK-------------------ALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY-----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCW 351
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.380e-39 Identity = 124/378 (32.80%), Postives = 163/378 (43.12%), Query Frame = 1
Query: 22 ASGSVECSI-----ATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK---------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLA--TSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
+SGSVE ++ T+IDRRC + T LM A+ G R+VR LLR GA VSV+ DG+TALH A+ ++LAV+K + NPLL + PL A + GHL VV+ELV +GID C +G AL TAA H I+TFL DAGV+DT+G AL +GG+ + R Y N+D+ +E PL+ F G HAPR R LL+ GAD + VRF + DE + + L +YF+ +V GLKGV+RLL+QE AVHA SW W
Sbjct: 26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGEMIDEPLVAAKITLRHEQTYFKDADVDRVD-----GLKGVVRLLQQEAAVHANSWAW 387
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 134 bits (336), Expect = 4.260e-34 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 1
Query: 1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKD 240
MPSTLSKASGS++ +IATT IDR CGD NQTPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHH+VYH HLAVSKD
Sbjct: 1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKD 80
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 122 bits (306), Expect = 8.160e-28 Identity = 86/219 (39.27%), Postives = 103/219 (47.03%), Query Frame = 1
Query: 457 NPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPM--KVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
NP+L + PL A + GHL VV+ELV +G+D C+ +G AL TAA H I+TFL DAGV DT+G AL +GGNA+ Y N D + LV F G +APR R LL+ GAD VRF GE G PL A R E V GLK V+RLLRQE+AVHA SW W
Sbjct: 172 NPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKG-LGE----IAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAW 374
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.810e-19 Identity = 82/217 (37.79%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 457 NPLLS----AYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSD-GGALALATAASRKHVDIVTFLCDAGVVDTEGVALQGGNA---NKGTRAYVNMDHGTLPKTYEEFVFQ------ETPLVSTFNLGSFHA--PRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFR-RFSPMK-VHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
NPLL+ A+ LPL TA NG L VV EL+ +GI C GG AL AA + H+D++ L AGVVDT G+AL + + + +GT P +V + TPL+ ++G + P+ RLL++AGAD TS VRF + TPL LAT R + + K + E++R L+ + RLL + EAVHA SWLW
Sbjct: 172 NPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGT-PSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLP----VVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLW 382
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 6.990e-19 Identity = 79/210 (37.62%), Postives = 107/210 (50.95%), Query Frame = 1
Query: 457 NPLLSAY------GSLPLGTAVYNGHLEVVRELVHWYGIDRCT-SDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALQGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFN-LGSFHA---PRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
+PLL+ + SLPL A GHLEVV EL+ GI C S GG AL AA KH+D++T L +AGVVDT G+A +G + V++ G + + E P F+ + +H PR RLL+EAGAD TS V P D G ++ TP+ L + E + L+ + RLL + EA+HAVSWLW
Sbjct: 75 DPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT-GLA-RGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTV--PIDGLPGTDNI----TPMGLTMLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLW 276 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig86.19980.1 >prot_F-serratus_M_contig86.19980.1 ID=prot_F-serratus_M_contig86.19980.1|Name=mRNA_F-serratus_M_contig86.19980.1|organism=Fucus serratus male|type=polypeptide|length=351bp MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRback to top mRNA from alignment at F-serratus_M_contig86:330710..331816- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig86.19980.1 ID=mRNA_F-serratus_M_contig86.19980.1|Name=mRNA_F-serratus_M_contig86.19980.1|organism=Fucus serratus male|type=mRNA|length=1107bp|location=Sequence derived from alignment at F-serratus_M_contig86:330710..331816- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig86:330710..331816- >mRNA_F-serratus_M_contig86.19980.1 ID=mRNA_F-serratus_M_contig86.19980.1|Name=mRNA_F-serratus_M_contig86.19980.1|organism=Fucus serratus male|type=CDS|length=2106bp|location=Sequence derived from alignment at F-serratus_M_contig86:330710..331816- (Fucus serratus male)back to top |