mRNA_F-serratus_M_contig858.19965.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 8.570e-14 Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 1 AGSSRCLDAFCAALNQADSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLS--DLKVKKLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEI 354
AG SRCLDA ALNQA WY+ST+QLQLASL+ C CRS+ L L ++ T +W G+ + VK+ RVP +R +TW+LP L + A + + G F+ ++
Sbjct: 7 AGPSRCLDALIIALNQASGGEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDL 126
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 4.010e-13 Identity = 50/119 (42.02%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 22 DAFCAALNQADS-SGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLSDLKVK--KLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEINEIAW 369
DA ALNQ +GWY+S LQLQLASLQ C CR VPT HLT E AL+W S + + L RVP+LRP +TW L + A ++ L FGD F+ ++ + W
Sbjct: 17 DALDIALNQVSGVNGWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCG-DAFESVDVLVFGDSFDYRVDRVTW 134
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 4.210e-12 Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 4 GSSRCLDAFCAALNQADSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLS--DLKVKKLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEI 354
G SRCLDA ALNQA WY+ST+QLQL SL+ C CRS+ L L ++ T +W G+ + VK+ RVP +R +TW+LP L + A + + G F+ ++
Sbjct: 39 GPSRCLDALIIALNQASGGEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDL 157
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.820e-11 Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 7 SSRCLDAFCAALNQA-DSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLSDLKVKKLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEINEIAW 369
S+ CL+A AL + D WY+ST +LQLASL+FC CR+ TLHL + ++ A + K+L RVP LR +TW +P S AL +L L FG F G + + W
Sbjct: 33 SNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTW 154
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 5.100e-11 Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 16 CLDAFCAALNQA-DSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLSDLKVKKLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEINEIAW 369
CL+A ALN+ D WY+ST +LQLASL FC CR+ T+HL + + A + K+L RVP LR +TW +P + A+ +++ L+FGD F + + W
Sbjct: 51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPW 169
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 8.280e-11 Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 1
Query: 10 SRCLDAFCAALNQA-DSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLSDLKVKKLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEINEIAW 369
S CL ALN+ D WY+ST +LQLASL+ C CR TLHLT + T + A + K+L RVP LR TW +P +S A ++ L+FG F+G ++ I W
Sbjct: 134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVW 254
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 3.860e-10 Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 1
Query: 4 GSSRCLDAFCAALNQA-DSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENA-THALVWAGSPLSDLKV--KKLRHMRVPSLRPLILTWRLPLFCLN 285
G RCL+AF ALN + D + WY+ST +LQLASLQFC CR VP+LHL NA A +W ++ + K+ VP RP +TW P + L+
Sbjct: 3 GPGRCLEAFAVALNTSCDGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLS 100
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 4.530e-10 Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 1
Query: 64 WYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAG--SPLSDLKVKKLRH--------MRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGD 336
WY ST+QLQLAS++FC CRSV TLHLT E T +WA S SD +RVP RP +TW LP L+ +S+ A NL+ + F D
Sbjct: 13 WYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFKNLECMSFSD 113
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 4.620e-9 Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 16 CLDAFCAALNQA-DSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLSDLKVKKLRHMRVPSLRPLILTWRLPLFCLNTSSRKALANLKQLKFGDCFNGEINEIAW 369
CL + ALN+ D + WY+ST +LQ ASL+FC CR+ P +HL + + A + K+L RVP LR +TW + + A+ ++ L+FG F+G + + W
Sbjct: 14 CLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTW 132
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 1.550e-8 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 13 RCLDAFCAALNQADSSG---WYSSTLQLQLASLQFCELCRSVPTLHLTEENATHALVWAGSPLSDLKVKKLRHMRVPSLRPLILTWRLP 270
RCLDAF AL+Q G WY+STLQLQLASL+FC CRS P LH+ + T +W+ L RVP+++ + LTW P
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS---LGQANPTAGTSTRVPAVQAVGLTWARP 93 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig858.19965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig858.19965.1 >prot_F-serratus_M_contig858.19965.1 ID=prot_F-serratus_M_contig858.19965.1|Name=mRNA_F-serratus_M_contig858.19965.1|organism=Fucus serratus male|type=polypeptide|length=633bp AGSSRCLDAFCAALNQADSSGWYSSTLQLQLASLQFCELCRSVPTLHLTEback to top mRNA from alignment at F-serratus_M_contig858:186338..188595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig858.19965.1 ID=mRNA_F-serratus_M_contig858.19965.1|Name=mRNA_F-serratus_M_contig858.19965.1|organism=Fucus serratus male|type=mRNA|length=2258bp|location=Sequence derived from alignment at F-serratus_M_contig858:186338..188595- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig858:186338..188595- >mRNA_F-serratus_M_contig858.19965.1 ID=mRNA_F-serratus_M_contig858.19965.1|Name=mRNA_F-serratus_M_contig858.19965.1|organism=Fucus serratus male|type=CDS|length=3798bp|location=Sequence derived from alignment at F-serratus_M_contig858:186338..188595- (Fucus serratus male)back to top |