prot_F-serratus_M_contig857.19962.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig857.19962.1
Unique Nameprot_F-serratus_M_contig857.19962.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length631
Homology
BLAST of mRNA_F-serratus_M_contig857.19962.1 vs. uniprot
Match: A0A6H5JD86_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD86_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.460e-76
Identity = 288/713 (40.39%), Postives = 344/713 (48.25%), Query Frame = 0
Query:   16 EFPSLSGGDSR----QTSGWADLARARRPRAEDFPALHGTGRPQR---GDGGGMSFRSVVEAYPTRAQEIAMSREGEGEWCYDYPMPPQEQASTKGASPTKGGRGGXXXGGSRRVPGIGNMKLKADKKAGKKNKQXXXXXXXXXXXI--------------ESDTSTLMSDRRADSQVSPLPKQTKKVGVAVPPHTPGASSPPAPGMTSSVTRGQTPPPLLANDSGAVVGAGGDATR---------GSGGGPTSVVAEMRELLGEEAFSEVKELSADYRSGFTMPGEYFKAMQERLPAERFGELFEGLVSILPDEDKRRELLVLLAASRSAKANAR--------------------------------AVGNYSNRKKKPVIHEPERSSVATPTLASTPSSKXXXXXXXXGSSKASGSARPKNNKPSKVTP--------PGSAATYLTAMHSKTG--TKMSSTGISVVRPGGASGGNGVSRAANRSA----------------NP--RPRSESPPPGVPLPRRGGDDVDGVSSDGGTGILGAGASWAAQGGSGFRGKRAVGAGGVGGKETRLNRDDFPGLVSNGVGGVSSXXXXXXXXXXXXXSRSTSSVLGARGVVATPGQARSQ------RRGSPTGEEFPGLPTP--SAAMPGMERVDWGVAAGQVSREGGGPTVGADGAVGAGGGKXXXXXXXXXXEKDALKEMAFGFR 630
            +FP+LSG          + WA LA + RPRA                 G GGG +FRS VEAYPTRAQEIAMS  GEG WC+DYPMPP E        PT    GGXXX    RV GIGNMKLK DKKA K++K XXXXXXXXXXX                   ++      A S V+P P   + V V V         P APGM +     Q  P   AN SG  +     A +                SVV E++ELLGEE F++VKE+SA YRSG+ MPGEYFKAM+ERLP ERFGELFEGL+  LPD+DKRRE+ VLLAASRS KA A                                 A G+ S     P +     S+ A    A T   +                        SK +P        PGSAAT+L AM +KTG   K   TGIS+VRP   +     + A N S+                NP  R R ESPPPG PL RR  +++ G       GI  AGASWA QGGSGF+G     A     + T ++RDDFPGL   G G  +      XXXXXXXX      + GA    A   + R++      ++  PTG++FPGLP P  S+ MPGME+VDWG +A      GG                XXXXXX    EKDAL+ MAFGFR
Sbjct:  357 DFPTLSGXXXXXXXXSRTCWAGLASSTRPRAXXXXXXXXXXXXXXMGGGVGGGSTFRSAVEAYPTRAQEIAMSGAGEGGWCFDYPMPPSE--------PT----GGXXXXXRGRVAGIGNMKLKVDKKAAKRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPASPAFHHPARSPVTPSPPAAEAVEVVV------EDFPLAPGMRAPHPPAQASPIAAANSSGPTLAQSIAARQQPQXXXXXXXXXXXXXSVVMELKELLGEEVFADVKEISASYRSGWMMPGEYFKAMEERLPEERFGELFEGLIGTLPDQDKRREMQVLLAASRSVKAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSESW----PEVGGNASSAGAAGGKAKTRGKQAKSNGAASNGRXXXXXXXXXXXXKSKTSPSTVAGAKTPGSAATWLKAMGTKTGGGAKTGGTGISIVRPSARASAGSGNPAPNASSTITSAAGGYSGSRLQCNPGVRARPESPPPGAPLRRRDDEELIG-------GIGQAGASWATQGGSGFKGASKAAAAPAPAR-TNISRDDFPGLPGGGGGAAALRANRAXXXXXXXXXAGMRGLGGAATATAFKVKPRAKAPXXXXQQRPPTGDDFPGLPMPASSSVMPGMEKVDWGGSA----HSGGSQRXXXXXXXXXX--XXXXXXXKQKMEKDALQGMAFGFR 1033          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig857.19962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JD86_9PHAE3.460e-7640.39RING-type domain-containing protein n=2 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig857contigF-serratus_M_contig857:102428..104720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig857.19962.1mRNA_F-serratus_M_contig857.19962.1Fucus serratus malemRNAF-serratus_M_contig857 102321..105290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig857.19962.1 ID=prot_F-serratus_M_contig857.19962.1|Name=mRNA_F-serratus_M_contig857.19962.1|organism=Fucus serratus male|type=polypeptide|length=631bp
MVGRPAPVPPSDSAQEFPSLSGGDSRQTSGWADLARARRPRAEDFPALHG
TGRPQRGDGGGMSFRSVVEAYPTRAQEIAMSREGEGEWCYDYPMPPQEQA
STKGASPTKGGRGGGAGGGSRRVPGIGNMKLKADKKAGKKNKQKSGGGGG
AGGGIESDTSTLMSDRRADSQVSPLPKQTKKVGVAVPPHTPGASSPPAPG
MTSSVTRGQTPPPLLANDSGAVVGAGGDATRGSGGGPTSVVAEMRELLGE
EAFSEVKELSADYRSGFTMPGEYFKAMQERLPAERFGELFEGLVSILPDE
DKRRELLVLLAASRSAKANARAVGNYSNRKKKPVIHEPERSSVATPTLAS
TPSSKTPSAGTMSGSSKASGSARPKNNKPSKVTPPGSAATYLTAMHSKTG
TKMSSTGISVVRPGGASGGNGVSRAANRSANPRPRSESPPPGVPLPRRGG
DDVDGVSSDGGTGILGAGASWAAQGGSGFRGKRAVGAGGVGGKETRLNRD
DFPGLVSNGVGGVSSSAGSAGGGGSAAASRSTSSVLGARGVVATPGQARS
QRRGSPTGEEFPGLPTPSAAMPGMERVDWGVAAGQVSREGGGPTVGADGA
VGAGGGKGAKKKAKQKAEKDALKEMAFGFR*
back to top