mRNA_F-serratus_M_contig855.19953.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 286 bits (731), Expect = 8.850e-84 Identity = 137/257 (53.31%), Postives = 171/257 (66.54%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNISTALNIT-SLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHPDNPPVEKE-LSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
+GG LDC + Y + +LVG A A +SF HRK LY +GI+ C GT PEE+LS+G CGC GYDLTQG DY++I L + S+ D +D++++REV +I+C + G+ Q+SSSLDP FW HPTMERLW S+LTG ITDFTWPD DVT + VE E +S+YGD+C GHRGSDVFPF +L D F I+TG+ TG LTNREVL A D R N++ Y+YD FKW HC ADG NFDD W
Sbjct: 467 IGGVLDCEQTYTTIRNLVGEEAAGELAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEILSTGQCGCLGYDLTQGTDYQDIFDRLTMADSIIGD---VDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAW 720
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 283 bits (725), Expect = 1.170e-82 Identity = 138/257 (53.70%), Postives = 177/257 (68.87%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNIS-TALNITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHPDNPPVEKE-LSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
+GG LDC + + +A LVG ++A A YSF HRK L+ DGI+ C G+ P EVLSSG CGC GYDLTQGDDY++I +++ L DF D D++R+VV LCT+ + G+ Q+SSSLDP F+ HPTMERLW +VLTG+ITDFTWPD DVT + VE E LS+YG++C GH GSDVFPF IL D GFE++TG+ + G LTNRE+L A D R N+V+Y+YD FKW HC ADG++F+D W
Sbjct: 502 IGGVLDCEKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDF---DADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMEN-GNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAW 754
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D8LC47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC47_ECTSI) HSP 1 Score: 266 bits (681), Expect = 1.060e-81 Identity = 127/231 (54.98%), Postives = 159/231 (68.83%), Query Frame = 2
Query: 80 ASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNISTALNIT-SLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHPDNPPVEKE-LSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
A +SF HRK LY +GI+ C GT PEE+LS+G CGC GYDLTQG+DY++I L + S+ D D+D++REV +I+C++ + G+ Q+SSSLDP FW HPTMERLW S+LTG ITDFTWPD DVT + VE E +S+YG++C GHRGSDVFPF +L D GF I+TG+ TG LTNRE L A D R N++ Y+YD FKW HC ADG NFDD W
Sbjct: 25 AMFSFVHRKNLYREGIFQCSGTASIDQKPEEILSTGQCGCLGYDLTQGNDYEDIFDRLTMAESILGD---ADDDVKREVTSIICSTPVNDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDDDVTVTKPDGTVEVESISLYGETCSGHRGSDVFPFGLLDSDTDGFTIKTGIRGNLDTGNQLTNREALQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAW 252
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 273 bits (697), Expect = 7.490e-79 Identity = 132/260 (50.77%), Postives = 173/260 (66.54%), Query Frame = 2
Query: 2 LGGFLDCAEPYN-KMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNI-STALNITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHP-DNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARD-GTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLWI 769
+GG +DC E Y + HLVG A A +F HRK ++ DGI+ CEG+V P+EVL SGVCGCHGYDLTQGDDY I + + + L D DE+ +RE+V ++C++ + G+ QSSSSLDP FW HPTMERLW SVLTG++TDF WPD DVTY D + +S Y + C+GHRGSDVFPF ILA++ F ++TG+ G G +TNREVLAA DPR+N + Y+YD F+W HC+ DG++ D W+
Sbjct: 448 IGGVMDCEETYGVDIEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDS---DENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWL 704
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 273 bits (697), Expect = 9.530e-79 Identity = 134/257 (52.14%), Postives = 169/257 (65.76%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNISTALN-ITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYH-PDNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
+GG LDC E Y ++ LVG A+ A SF HRK LY DGI+ C+G D EEV+ S CGC GY+LT+G+DY+ I ++ I + D+ D D +R+VV +CT+ L G+ Q+SSSLDP FW HPTMERLW VLTG+ITD++WPD DVTY PD V + LS Y +SC GH GSDVFPF +L D GFEI+TG+ TG LTNRE L A DPR+N + Y+YD F W+HC+ADGY+F D W
Sbjct: 488 VGGVLDCEETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVMLSR-CGCLGYNLTEGNDYERIYHTMSVIDDVIGDY---DADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAW 740
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 258 bits (658), Expect = 1.450e-75 Identity = 124/258 (48.06%), Postives = 169/258 (65.50%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNIST--ALNITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHP-DNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
+GG L+C + + ++ LVG AN+ + +F+ RK+L+ D + CEG+ P +E+LSSG CGC GYDL+QGDD+K I T L+ + D+ D+ +R+VV +C S + G+ + SSLDP FW MHPTMERL+ S LTG++TDF WPD + +Y D V + S YGD+C GH GSDVFPF +L DD GF+I+TGML + TG LTNREVLA +D R N + Y+YD+F+WDHC DG +F D W
Sbjct: 255 IGGVLNCEDTISYISSLVGEKNANSLSLNTFDQRKSLWRDDFFACEGSAAVGAPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTLDFDDVIGDY---DDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAW 509
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 257 bits (656), Expect = 1.400e-73 Identity = 125/260 (48.08%), Postives = 168/260 (64.62%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNISTALNITSLTSDFDLL----DEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTY-HPDNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
+GG L+C + + ++ LVG AN+ + +F+ RK L+ DG + CEG+ P +E+LSSG CGC GYDL+QGDD+K I T+ T DFD + D++ +R+VV +C S + G+ + SSLDP FW MHPTMERL+ S LTG++TDF WPD + +Y D V + IYGD+C GH GSDVFPF +L D F+I+TGM TG LTNREVLA +D R N + Y+YDNF+WDHC DG +F+D W
Sbjct: 428 IGGVLNCEDTISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECEGSAAVGTPADELLSSGKCGCLGYDLSQGDDWKTI-----YTNSTVDFDDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAW 682
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 255 bits (652), Expect = 4.160e-73 Identity = 123/258 (47.67%), Postives = 166/258 (64.34%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNIST--ALNITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHP-DNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
+GG L+C + + ++ LVG AN+ + +F+ RK L+ DG + CEG+ P +E+L SG CGC GYDL QGDD+K I T L+ + D+ D++ +R+VV +C S + G+ + SSLDP FW MHPTMERL+ S LTG++TDF WPD + +Y D V + S YGD+C GH GSDVFPF +L DD F+I+TGM + TG LTNREVLA +D R N + Y+YDNF+WDHC DG +F D W
Sbjct: 426 IGGVLNCEDTISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACEGSAAVGAPADELLLSGKCGCLGYDLNQGDDWKTIYTNSTLDFDDVIGDY---DDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAW 680
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.280e-66 Identity = 116/255 (45.49%), Postives = 162/255 (63.53%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQG-DDYKNI--STALNITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHDVTYHPDNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFD 757
+GG L+C E ++ LVG AN+ A Y+F+ RK + DG + CEGT + ++V S+G+CGC G+DL+ DD++ I ++ ++ ++ SD+ D++ +R VV +C S + G+ Q+ SSLDP FW MHPTMERL+ + LTG D WPD D + + +S YGD CVGH GSDVFPF++L D GFEI+TGM G TNREVLAA+DPR+N ++Y+YD FKWDHC GY+FD
Sbjct: 463 IGGVLNCEETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCEGTAEAGATEDDVFSAGMCGCLGFDLSSNSDDWQTIYYNSTIDFDNVISDY---DDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPDADAS------SSNEMISRYGDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFD 708
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 235 bits (599), Expect = 3.690e-65 Identity = 119/258 (46.12%), Postives = 155/258 (60.08%), Query Frame = 2
Query: 2 LGGFLDCAEPYNKMAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVCGCHGYDLTQGDDYKNISTALN-ITSLTSDFDLLDEDLQREVVTILCTSVLGLGEQTQSSSSLDPMFWLMHPTMERLWQVSVLTGRITDFTWPDHD--VTYHPDNPPVEKELSIYGDSCVGHRGSDVFPFSILADDRRGFEIETGMLARDGTGVGLTNREVLAAVDPRLNNVTYIYDNFKWDHCSADGYNFDDLW 766
LGG +DCA Y + LVG+++A +LSSG CGCHGYDLTQG DYK + ++ + L DF D+ QR+VV LCT V+ G TQSSSS DP+FW +HPTMERL+Q VLTG I DF W D D VT+ D V + S+Y D C+GH GSDVFP+ +L D GFE++TG+ + G LTNRE+LAA+DPR N+++Y+YD F+W HC ADG++F+D W
Sbjct: 457 LGGTMDCAGTYEAIGELVGNSIAETLTLL----------------------------LLSSGQCGCHGYDLTQGSDYKIVMESMEYLEDLIGDF---DDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTF-ADGTTVSEITSVYSDHCIGHHGSDVFPYYLLDTDTDGFEVKTGIRGQPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFNDAW 682 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig855.19953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig855.19953.1 >prot_F-serratus_M_contig855.19953.1 ID=prot_F-serratus_M_contig855.19953.1|Name=mRNA_F-serratus_M_contig855.19953.1|organism=Fucus serratus male|type=polypeptide|length=245bp MAHLVGSTMANAFASYSFNHRKALYWDGIWYCEGTVDEHMPPEEVLSSGVback to top mRNA from alignment at F-serratus_M_contig855:330465..332821+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig855.19953.1 ID=mRNA_F-serratus_M_contig855.19953.1|Name=mRNA_F-serratus_M_contig855.19953.1|organism=Fucus serratus male|type=mRNA|length=2357bp|location=Sequence derived from alignment at F-serratus_M_contig855:330465..332821+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig855:330465..332821+ >mRNA_F-serratus_M_contig855.19953.1 ID=mRNA_F-serratus_M_contig855.19953.1|Name=mRNA_F-serratus_M_contig855.19953.1|organism=Fucus serratus male|type=CDS|length=1470bp|location=Sequence derived from alignment at F-serratus_M_contig855:330465..332821+ (Fucus serratus male)back to top |