prot_F-serratus_M_contig855.19944.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig855.19944.1
Unique Name	prot_F-serratus_M_contig855.19944.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	798

Homology

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BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Match: D7FJI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI0_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 2.000e-76
Identity = 140/241 (58.09%), Postives = 180/241 (74.69%), Query Frame = 0

Query:  555 GTDGPETSFGSVGGPFATESPQETTSAKDEQKLTP-SGLSSLSSSQELFASLEKERLEEATAGAKSRSRKVPGPTWANIGHGGECHNAGTEESASIYAHPEDRFTTTNSERFGPLMREKHIEKGRRSPWFYRRRVGDAAAVASARQQRSEIRSNKIRQHLERIALSVKAEEIEARLKDERHIRGMARLRLRYGKWANSVDTWHANEAPRLADFSKRQFPEQMTRFRGGQQVFELLGGDSTI 794
            G DG  TSFGS GGPFA    QE    + E  L+P + L+SLSS  +LF+SLE+ RL++ATAGA +R+RKV   TWA+IGHGG  ++AGT+ES+S YA P +RFTTTNSER+ PL++ K IEKG+RS  F R+R+GD+A  AS R Q+SE RS K+++H+ERI+LSVK EE+ ARLK+ER +RG AR RLRY +W NS+D W  +E P+LAD+ KRQFP Q +R RGGQQ+ E LGG   I
Sbjct:   13 GKDGASTSFGSEGGPFAEAPLQE----QGEGSLSPKTSLASLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQSSRIRGGQQMHEALGGPMAI 249

[Close]

BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Match: D7FJI1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI1_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 3.410e-62
Identity = 117/209 (55.98%), Postives = 151/209 (72.25%), Query Frame = 0

Query:  258 KSGSVELDEFAALLERAMAEKVPADTTSAWQERELPKREAVDAELRSVELQPIHDHRSQRIKNKVCHYLNKVVPHATVGLAEDRCTFLKKQFTLLHGDAPKRNTRGIRLEDLARALGPTGMNLGVSDNDLGLLMREMDTSGDGVVTLKEFAAFINLDEHEPLYHPLFDARRRNVNLLQTFVDLPPPAATPEELNIKERANQLHLAAVPS 466
            KSG +ELDEFA  L ++  +   +   SA Q +E  +++A D E RSV LQPI DH++QRIKNK+ H + + VP+A+ GLA++R  FLKKQF  L  DA    +RGI LE+L +ALGP GMNLGV+D DL LL++EMDT+ DG +T+KEFAAF+NLD+H+PLY PLFD RRRNVN+LQ  V+  PP  +PEE   K RA+ LH  AVPS
Sbjct:   72 KSGGIELDEFADFLGQSETKGASSGDPSALQ-KEKTQQQADDVEARSVTLQPIQDHKAQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAA---SRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNCDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQAMVEQAPPVESPEEEFFKARADHLHSVAVPS 276

[Close]

BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Match: A0A7R9YBQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.570e-23
Identity = 73/238 (30.67%), Postives = 123/238 (51.68%), Query Frame = 0

Query:  191 INRACQRLGHLANIKYGSVREFFRMYDANCDGVLGFDEFSKGITMCQLDHLFPRSLQRALFDRVDTNKSGSVELDEFAALLERAMAEKVPADTTSAWQERELPKREAVDAELRSVELQPIHDHRSQRIKNKVCHYLNKVVPHATVGLAEDRCTFLKKQFTLLHGDAPKRNTRGIRLEDLARALGPTGMNLGVSDNDLGLLMREMDTSGDGVVTLKEFAAFINLDEHEPLYHPLFDARR 428
            ++RA  RL  L  +KYGSVR+FF  +D N +G +  +EFS+      L+ L PR  QR +F+R+D ++SGS++L+EF + L R  A   P D            R   +A  + V+L+  +  R++ +++ +   L KV     +    D           +     K  T  +  ++ A ALGP G+N+   ++DL ++   MD + D  ++  EF  F+N+D+ +P Y+P +D RR
Sbjct:  164 LDRAIGRLQQLLVLKYGSVRDFFHTFDENHNGKITLEEFSRTFKRRNLERLIPRREQRLIFERLDADQSGSLDLEEFKSALTRETAFSQPLD------------RMREEAREKGVKLRRTNP-RAELVRDAL---LQKVTQRLRMSKESDSVERKTAYLLNIFKQIDKDMTGLLSADEFAAALGPGGLNVCAKEDDLRMVFEAMDVNEDERISYSEFIDFLNVDDIDPEYNPFYDGRR 385

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FJI0_ECTSI	2.000e-76	58.09	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FJI1_ECTSI	3.410e-62	55.98	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A7R9YBQ5_9STRA	1.570e-23	30.67	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 386..414 e-value: 0.81 score: 18.5 coord: 246..274 e-value: 1.8 score: 15.8 coord: 208..236 e-value: 0.0015 score: 27.8
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 367..410 e-value: 4.2E-5 score: 23.3 coord: 248..273 e-value: 0.0016 score: 18.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 204..239 score: 11.501
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 382..417 score: 10.134
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 242..277 score: 10.469
None	No IPR available	GENE3D	1.10.238.10		coord: 344..418 e-value: 4.4E-6 score: 28.3
None	No IPR available	GENE3D	1.10.238.10		coord: 148..278 e-value: 2.1E-12 score: 49.5
None	No IPR available	PANTHER	PTHR10891:SF814	CALCIUM-BINDING PROTEIN CML27-RELATED	coord: 208..274
IPR039647	EF-hand domain pair protein CML-like	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 208..274
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 395..407
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 255..267
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 217..229
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 209..415

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig855	contig	F-serratus_M_contig855:44029..60052 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig855.19944.1	mRNA_F-serratus_M_contig855.19944.1	Fucus serratus male	mRNA	F-serratus_M_contig855 43524..60116 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig855.19944.1 ID=prot_F-serratus_M_contig855.19944.1|Name=mRNA_F-serratus_M_contig855.19944.1|organism=Fucus serratus male|type=polypeptide|length=798bp
MDVNKLSRPGRNKRTQVGTTNRHSIFPTKALGSSSRKSRHQRRDLIRRKK
SPTSSIAPRSSTSLDGGTSTASSRSQTLHDNHRVREMMLLTSSKSMPALK
RTGDDRDINGACVGERGKTTRVGKTERDHPASREMGQEDEGQANQSPAPA
DDDPYLTSAQLAHVSGLQPSESDVLIPDPYRHRSLLHVRWINRACQRLGH
LANIKYGSVREFFRMYDANCDGVLGFDEFSKGITMCQLDHLFPRSLQRAL
FDRVDTNKSGSVELDEFAALLERAMAEKVPADTTSAWQERELPKREAVDA
ELRSVELQPIHDHRSQRIKNKVCHYLNKVVPHATVGLAEDRCTFLKKQFT
LLHGDAPKRNTRGIRLEDLARALGPTGMNLGVSDNDLGLLMREMDTSGDG
VVTLKEFAAFINLDEHEPLYHPLFDARRRNVNLLQTFVDLPPPAATPEEL
NIKERANQLHLAAVPSAALDAAVRIERSKRDKPSIEKGKPRRAGRPESPP
WTVTTKNSALLSVSTGSGTKVVDVWDLPPPTRRLSSTKRLLTSSMRSLSQ
CVAPGTDGPETSFGSVGGPFATESPQETTSAKDEQKLTPSGLSSLSSSQE
LFASLEKERLEEATAGAKSRSRKVPGPTWANIGHGGECHNAGTEESASIY
AHPEDRFTTTNSERFGPLMREKHIEKGRRSPWFYRRRVGDAAAVASARQQ
RSEIRSNKIRQHLERIALSVKAEEIEARLKDERHIRGMARLRLRYGKWAN
SVDTWHANEAPRLADFSKRQFPEQMTRFRGGQQVFELLGGDSTIAAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR039647	EF_hand_pair_protein_CML-like
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair